Gene

KWMTBOMO15108  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004998

Annotation

PREDICTED:_beta-mannosidase-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr25(-):5325526-5334270      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.733

CDS

ATGAACACGTGTGTTTTGTTGCAAGCTTTTGTCTTTTTGTTCTACGTCAATAATGTTACATCGGTGCGGTTAGATTTAAGTGCTGCTCATTGGAAATTGACCAACAAGAATGGATCGATTGCAGTCCGCGGCTCTGTGCCGGGTGGGGTATATACCGATCTCAACAAAGCGGGTATCATTGGAGATGTCTTGTATGGCTTCAATGACGTGCTCAGCAGATGGGTGGCATACGATACATGGACGTATACTGGGAAGTTTAACGTCAGCGCAGCAGACTTGAGCACGGAGGCAGTTAACTTGGTGTTCGATGGTATTGATACAGTGGCGTTCGTGGAAATAAACAATACCCCAGTTGGTAGCACGAGCAGTATGTTCGTGAGATACGTGTTTAATGTCAAGGAACAAATGCAGATAGGCGAAAATGTTTTGAAAATTACTTTTGTGTCGCCAATTGAAGCTGCAAATATCAGATCGCAGAAACATTTCGCAGCACCAGCCTGTGTCCCTGATGTATATAATGGAGAATGTCACGTTAATCAGCTGAGGAAGATGCAGGCTTCGTTTTCTTGGGACTGGGGACCTGCTCTACCGTCCGTTGGAATTTGGAAACCAGCGTATATCGAGTTTTATAACAGTTTAATCTTACGAACGGTTACTACACACATAAAAAAGGTTGACAGCCACTGGCAGTTGAGATTGTTGGCATATTTGGAATCTACCAAGAGTAATGAGATTCTCCAAGCGTATTTTAGTGCGTCTCTACAAGTCGAAGGAGGGCAAACCTTAGTGTTTGGTGGAGACGTTGATATTAATACGAAAGAAGACAAAACAGCTGAAGTTGAGCTTAATATTACAATAAGTGAGAACGTAGTCCGGATGTGGTGGCCAAACGGTTATGGTGATCAACCTCTGTACGAGTTGAACGTGTATCTCTCAAACTCTCATGACGTGGAAATTTCACACAAAAAGCTACTAATCGGCTTTAGGACAATTGAGTTGATTGAAGAAGATGCTTCAATAAAACTAGGAAATTCCACGTCAGCAAAGGGATTGACATTCTATTTTAAAGTAAACGGATATCCGTTATTCATGAAAGGATCGAACTGGATTCCAGCCAACATATTACCGGAATTGGGCTCCGATGAACGAATAATTGATAGTTTGCTGACTTCTGCTCGAGATATCCACACGGCGATGCTACGCGTGTGGGGCGGAGGGATCTATGAATCGGACTATTTCTATACAAGATGTGACCAGCTCGGTATATTGGTGTGGCAAGATTTCATGTTTGCTTGCGCCATGTACCCTGTCGATGCGGAATTTTTAAGTAATGTGAAAACGGAAATAGAACAAACAGTTACAAATCTTCAGCACCATCCTTCCATTGCGTTATGGTCCGGGAATAACGAGAACGAAGCTGCTCTGCGAGGAAACTGGTACTCGAAGCCCTCAGAATTTAATAAATACAAACAGGACTATATAAAGTTATACGTTGACACGATTAAACCGATTGTCGAGGCTTTGGATCCCAATAGGCGATATCTGATTTCGAGTCCCACGAACGGCTTAGAATCTGAGAAAGAAGGTTATATAGCGACAAACCCGTATGATCCCCATTACGGTGACACACACTACTATAACTACATCATCGATAATTGGGATTACAATGTGTATCCGGCTACAAGATTTGCTTCAGAATATGGTTTTCAATCGATGCCGTCATTGGCTGTTTTGAAGACTGCCACGAAAGACCACAAAGACCTCAGTCTGGACAGTGAATTCTTGAAACACAGGCAGCACCATCCGAACGGTTATGTGTATATTGAGCAGCAAATGGACAAGCGCTTGATGTTGGAAAAAAACGATACAAAGTATTTTGAAAAGTTCTTGTTTTATAGTCAGATTTCGCAAGCGATGTCATTGAAAGTTCAGACAGAATATTATCGACAAAGCCAGGCTGATTGGTACACGATGGGCGCGTTGTATTGGCAACTCAATGATGTATGGCAGGCACCGTCTTGGTCTGGCATTGAGCACGGCGGTCGATGGAAAATGCTGCATTACTTCGCAAATACGTTTTTCGCGCCTGTTTTAGTATCCCCTCGTCTTTTGTTATCAGGGGATGTTGATGTTTATCTTTTAAACGACAGATTCGTACCGATTTTCGACTCAAAAATTACAGTGGAGTTCTTCAATTGGTCTAGTTTGGTACCTATCAAAACCGAGTCTTACGATGCAGCAGCGGAAGCTCTGAGTTCCAAGAAGCAAAACATTGAGATCGATCTTTGGGACGAACCTAATCTTGATGAAATATTCTTGAGGTTTTCCTTGAAGTCGGATGGCGTAGCCTCAAGCCCATATAATTACATCTTTCCAAAGCCACTGAAATCGGTCAAAGGTTTAAATGTTCCTCGAATTCAGATACATGTGACAAAGGTTAAACAAAGAAGAGTCGATAATCTAACAGAGTACAACGTGGATATAAGGGTTGATACGGTGGTATTGTTTCTCTGGTTAGAAGCGGCTTCAGTAGACGGCCATTTTGAAGACAACGGTTTTATATTAGCGCAGCCTTATATCCGTGTCAAGTATACAAGTAAATCGAATATGAAACCGCAGAAATTAGAAAAGTCGATCACTTTTCAATATTACGTGAATTGA

Protein

MNTCVLLQAFVFLFYVNNVTSVRLDLSAAHWKLTNKNGSIAVRGSVPGGVYTDLNKAGIIGDVLYGFNDVLSRWVAYDTWTYTGKFNVSAADLSTEAVNLVFDGIDTVAFVEINNTPVGSTSSMFVRYVFNVKEQMQIGENVLKITFVSPIEAANIRSQKHFAAPACVPDVYNGECHVNQLRKMQASFSWDWGPALPSVGIWKPAYIEFYNSLILRTVTTHIKKVDSHWQLRLLAYLESTKSNEILQAYFSASLQVEGGQTLVFGGDVDINTKEDKTAEVELNITISENVVRMWWPNGYGDQPLYELNVYLSNSHDVEISHKKLLIGFRTIELIEEDASIKLGNSTSAKGLTFYFKVNGYPLFMKGSNWIPANILPELGSDERIIDSLLTSARDIHTAMLRVWGGGIYESDYFYTRCDQLGILVWQDFMFACAMYPVDAEFLSNVKTEIEQTVTNLQHHPSIALWSGNNENEAALRGNWYSKPSEFNKYKQDYIKLYVDTIKPIVEALDPNRRYLISSPTNGLESEKEGYIATNPYDPHYGDTHYYNYIIDNWDYNVYPATRFASEYGFQSMPSLAVLKTATKDHKDLSLDSEFLKHRQHHPNGYVYIEQQMDKRLMLEKNDTKYFEKFLFYSQISQAMSLKVQTEYYRQSQADWYTMGALYWQLNDVWQAPSWSGIEHGGRWKMLHYFANTFFAPVLVSPRLLLSGDVDVYLLNDRFVPIFDSKITVEFFNWSSLVPIKTESYDAAAEALSSKKQNIEIDLWDEPNLDEIFLRFSLKSDGVASSPYNYIFPKPLKSVKGLNVPRIQIHVTKVKQRRVDNLTEYNVDIRVDTVVLFLWLEAASVDGHFEDNGFILAQPYIRVKYTSKSNMKPQKLEKSITFQYYVN

Uniprot

H9J657   A0A194RLG3   A0A194PG10   A0A3S2LT59   A0A2A4JXF5   A0A212FKX6   + More
A0A067R9Q3   A0A2P8XR62   A0A2J7PLP9   A0A2J7PLP1   A0A2J7PLP7   E0VGU3   A0A1B6CRS8   A0A1B6DET4   A0A1Y1K7C0   V5GTZ4   A0A3L8D9I2   A0A139WEX1   A0A026WIQ8   E2C737   A0A1B6E8G1   A0A158NAL8   A0A195DQH5   A0A1Y1L9T0   E2A2D8   J9JNE5   A0A232EVS0   A0A195EWJ7   K7J191   J3JUU1   A0A151WNV5   A0A154PIY7   A0A2H8TRZ3   A0A224XIF3   A0A1S3HKP6   A0A1S3HNS4   A0A0J7KIE6   A0A0N7ZBH8   A0A0P4W521   A0A195CJL5   A0A3B4TEZ1   A0A3R7N8V9   A0A3Q3XH45   A0A3B3BQC3   A0A1A8FVE1   A0A0P5V540   A0A1A7WI55   A0A0P6A066   A0A3Q1J3Y4   A0A1A8CE61   A0A0N8CNR4   A0A0P5XKC3   A0A0P5UZ95   A0A1A8HZ44   A0A1S3S6B6   A0A0P6ED52   A0A0P5ZU50   A0A0P5UTH6   D6WQ73   A0A0P6HDG8   A0A0P6DKB0   A0A3P9C1M8   A0A0N8C742   A0A0P6DRB4   I3IVD8   A0A0P6DI07   A0A0P4YPR0   I3IVD9   T1J4G7   A0A1A8AQF9   A0A0P4XID3   G3NMT6   A0A3Q0RMG4   A0A2U9CHS8   A0A2B4SQQ3   A0A3P9HDD6   A0A0L7QMF7   A0A131YKP5   A0A3P9KI97   A0A3P9NMQ8   A0A3P8NCR7   A0A0P5NIL2   A0A3Q2CIR1   A0A0P6CXK9   A0A3Q4GES9   A0A3Q4GET7   A0A3B3YQX4   A0A3S3RVX0   A0A087XRY9   H2MVB9   A0A3P8NCU1   A0A0P5CFD5   A0A3P8VW64   A0A3Q2PBK5   A0A3B4DWC2   L7M4Z6   A0A3B3VVJ3   M4AJE0   A0A1A8EBC9  

Pubmed

19121390    26354079    22118469    24845553    29403074    20566863    + More
28004739    30249741    18362917    19820115    24508170    20798317    21347285    28648823    20075255    22516182    29451363    25186727    17554307    26830274    24487278    25576852    23542700   

EMBL

BABH01030022    BABH01030023    KQ460045    KPJ18259.1    KQ459604    KPI92232.1    + More
RSAL01000228    RVE43921.1    NWSH01000433    PCG76456.1    AGBW02007950    OWR54386.1    KK852605    KDR20416.1    PYGN01001492    PSN34499.1    NEVH01024424    PNF17252.1    PNF17254.1    PNF17256.1    AAZO01002243    DS235152    EEB12599.1    GEDC01021128    JAS16170.1    GEDC01013109    JAS24189.1    GEZM01093812    JAV56110.1    GALX01003354    JAB65112.1    QOIP01000011    RLU17170.1    KQ971354    KYB26528.1    KK107182    EZA55927.1    GL453303    EFN76236.1    GEDC01003085    JAS34213.1    ADTU01010379    KQ980612    KYN15155.1    GEZM01061515    JAV70419.1    GL436037    EFN72401.1    ABLF02024521    ABLF02024522    ABLF02024524    NNAY01001956    OXU22459.1    KQ981954    KYN32267.1    BT127006    AEE61968.1    KQ982894    KYQ49546.1    KQ434905    KZC11278.1    GFXV01005160    MBW16965.1    GFTR01008216    JAW08210.1    LBMM01006916    KMQ90198.1    GDRN01083338    JAI61688.1    GDRN01083340    JAI61687.1    KQ977642    KYN00908.1    QCYY01001123    ROT80410.1    HAEB01016311    SBQ62838.1    GDIP01103930    JAL99784.1    HADW01004053    SBP05453.1    GDIP01203719    GDIP01036245    JAM67470.1    HADZ01013099    SBP77040.1    GDIP01113735    JAL89979.1    GDIP01071093    JAM32622.1    GDIP01106529    JAL97185.1    HAED01002908    SBQ88771.1    GDIQ01078632    JAN16105.1    GDIP01039392    JAM64323.1    GDIP01109740    JAL93974.1    EFA06933.2    GDIQ01021075    JAN73662.1    GDIQ01076277    JAN18460.1    GDIQ01108323    JAL43403.1    GDIQ01073534    JAN21203.1    AERX01008747    GDIQ01078633    JAN16104.1    GDIP01225570    JAI97831.1    JH431845    HADY01018433    SBP56918.1    GDIP01240775    JAI82626.1    CP026259    AWP16047.1    LSMT01000016    PFX33004.1    KQ414894    KOC59716.1    GEDV01010076    JAP78481.1    GDIQ01148610    JAL03116.1    GDIQ01088474    JAN06263.1    NCKU01004711    NCKU01004697    RWS05542.1    RWS05566.1    AYCK01013023    GDIP01171116    JAJ52286.1    GACK01006875    JAA58159.1    HAEA01015002    SBQ43482.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000027135    UP000245037    UP000235965    UP000009046    UP000279307    UP000007266    UP000053097    UP000008237    UP000005205    UP000078492    UP000000311    UP000007819    UP000215335    UP000078541    UP000002358    UP000075809    UP000076502    UP000085678    UP000036403    UP000078542    UP000261420    UP000283509    UP000261620    UP000261560    UP000265040    UP000087266    UP000265160    UP000005207    UP000007635    UP000261340    UP000246464    UP000225706    UP000265200    UP000053825    UP000265180    UP000242638    UP000265100    UP000265020    UP000261580    UP000261480    UP000285301    UP000028760    UP000001038    UP000265120    UP000265000    UP000261440    UP000261500    UP000002852   

PRIDE

H9J657   

Pfam

PF17753   Ig_mannosidase        + More
PF00703   Glyco_hydro_2
PF17786   Mannosidase_ig
PF02836   Glyco_hydro_2_C
PF00078   RVT_1
PF02837   Glyco_hydro_2_N
PF02463   SMC_N
PF06470   SMC_hinge

Interpro

IPR008979   Galactose-bd-like_sf        + More
IPR041625   Beta-mannosidase_Ig       
IPR013783   Ig-like_fold       
IPR017853   Glycoside_hydrolase_SF       
IPR036156   Beta-gal/glucu_dom_sf       
IPR041447   Mannosidase_ig       
IPR006102   Glyco_hydro_2_Ig-like       
IPR000253   FHA_dom       
IPR006103   Glyco_hydro_2_cat       
IPR000477   RT_dom       
IPR006104   Glyco_hydro_2_N       
IPR041741   SMC3_ABC_euk       
IPR003395   RecF/RecN/SMC_N       
IPR036277   SMC_hinge_sf       
IPR027417   P-loop_NTPase       
IPR010935   SMC_hinge       

SUPFAM

SSF51445   SSF51445        + More
SSF49303   SSF49303       
SSF49785   SSF49785       
SSF75553   SSF75553       
SSF52540   SSF52540       

Gene 3D

2.60.120.260     2.60.40.10    

CDD

cd03272  ABC_SMC3_euk

ProteinModelPortal

H9J657   A0A194RLG3   A0A194PG10   A0A3S2LT59   A0A2A4JXF5   A0A212FKX6   + More
A0A067R9Q3   A0A2P8XR62   A0A2J7PLP9   A0A2J7PLP1   A0A2J7PLP7   E0VGU3   A0A1B6CRS8   A0A1B6DET4   A0A1Y1K7C0   V5GTZ4   A0A3L8D9I2   A0A139WEX1   A0A026WIQ8   E2C737   A0A1B6E8G1   A0A158NAL8   A0A195DQH5   A0A1Y1L9T0   E2A2D8   J9JNE5   A0A232EVS0   A0A195EWJ7   K7J191   J3JUU1   A0A151WNV5   A0A154PIY7   A0A2H8TRZ3   A0A224XIF3   A0A1S3HKP6   A0A1S3HNS4   A0A0J7KIE6   A0A0N7ZBH8   A0A0P4W521   A0A195CJL5   A0A3B4TEZ1   A0A3R7N8V9   A0A3Q3XH45   A0A3B3BQC3   A0A1A8FVE1   A0A0P5V540   A0A1A7WI55   A0A0P6A066   A0A3Q1J3Y4   A0A1A8CE61   A0A0N8CNR4   A0A0P5XKC3   A0A0P5UZ95   A0A1A8HZ44   A0A1S3S6B6   A0A0P6ED52   A0A0P5ZU50   A0A0P5UTH6   D6WQ73   A0A0P6HDG8   A0A0P6DKB0   A0A3P9C1M8   A0A0N8C742   A0A0P6DRB4   I3IVD8   A0A0P6DI07   A0A0P4YPR0   I3IVD9   T1J4G7   A0A1A8AQF9   A0A0P4XID3   G3NMT6   A0A3Q0RMG4   A0A2U9CHS8   A0A2B4SQQ3   A0A3P9HDD6   A0A0L7QMF7   A0A131YKP5   A0A3P9KI97   A0A3P9NMQ8   A0A3P8NCR7   A0A0P5NIL2   A0A3Q2CIR1   A0A0P6CXK9   A0A3Q4GES9   A0A3Q4GET7   A0A3B3YQX4   A0A3S3RVX0   A0A087XRY9   H2MVB9   A0A3P8NCU1   A0A0P5CFD5   A0A3P8VW64   A0A3Q2PBK5   A0A3B4DWC2   L7M4Z6   A0A3B3VVJ3   M4AJE0   A0A1A8EBC9  

PDB

6DDU     E-value=4.55548e-154,     Score=1400

KEGG

101741798    K01192 beta-mannosidase [EC:3.2.1.25] | (RefSeq) beta-mannosidase

PATHWAY

00511    Other glycan degradation - Bombyx mori (domestic silkworm)
04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0005975   GO:0004553   GO:0004567   GO:0006516   GO:0005764   GO:0046355   GO:0051276   GO:0005694   GO:0005524   GO:0016021   GO:0016020   GO:0006412   GO:0005515   GO:0000166   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

SignalP

Position:   1 - 21,         Likelihood:  0.916463

 

 

Length:

886

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.44201

Exp number, first 60 AAs:

1.40705

Total prob of N-in:

0.07045

outside

1  -  886

 

 

Pi

250.379057

Theta

201.946248

Tajima's D

0.72441

CLR

0.104762

CSRT

0.582820858957052

Interpretation

Uncertain