SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15106
Pre Gene Modal
BGIBMGA004901
Annotation
Hdd23-like_protein_[Helicoverpa_armigera]
Location in the cell
Cytoplasmic   Reliability : 1.072 Nuclear   Reliability : 1.629
 

Sequence

CDS
ATGTCTTCGTTTAGCGTGTGTGTATTAGTTTTGTGTGTCTTGTGCGTCATCGCTGAAAGCAAAGTCATTAAAACCAAAGAGTTCTCGTTACCACCAGAAGGACTTACTGTTGAGATATCAATCAGAACTAAGTCGGCCAGCCACCCGATCTCAACTGTCAAAGTCGACATTGACGAGCAGTCTAAGAAAGTGACAGTGTCAAAAGTTCATCATCGATTGAAAGGACGCAAGGTGCGGAAACATAAAGCCAAAACGGAAGCAACAATATTAGAAAACCGGGGTGGTTTCCCGCAAGGCAATTGTCCAGATATGTGGGAGTGGAATTCGGGCATGTGTATACCCATAGCCGACTACGAATAA
Protein
MSSFSVCVLVLCVLCVIAESKVIKTKEFSLPPEGLTVEISIRTKSASHPISTVKVDIDEQSKKVTVSKVHHRLKGRKVRKHKAKTEATILENRGGFPQGNCPDMWEWNSGMCIPIADYE

Summary

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.991355
 
 
Length:
119
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.74472
Exp number, first 60 AAs:
1.74472
Total prob of N-in:
0.11584
outside
1  -  119
 
 

Population Genetic Test Statistics

Pi
276.296692
Theta
223.539568
Tajima's D
0.781003
CLR
0
CSRT
0.595420228988551
Interpretation
Uncertain
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