Gene

KWMTBOMO15102

Annotation

PREDICTED:_uncharacterized_protein_LOC105841398_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr25(-):4874751-4915906      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.545

CDS

ATGCGTTTACACGGAGGATACTTCAAAAAGGATTCAGATAGCAAAAAGCTAGATAAAAAAGAAACGACCGGACCACCTCTGCAAACAGCATCCGTCTCGGTACGAGCCCTCATTGAAGAAAAGATCATTAGCAGACGAGGGGCCACGGCAAGCTCGACGAATTCGCCGCCACCGCTGTCAACGATACGCGCGTCATCCTCATCACCCGCCACTACGTCGGCACAGTTCGTACCGCCACGGGCGCCATCCGCCGTCACTGTGGCCGCGAACTTATCTACTAACATGAGCGCCGCACAAAGGGACTCTACTCTAATCGAACTCTTGAAGAAAGGGAACACTAAAGCTGTCAAACGATCGGCATCGGACCCGGGACACGCATCGCCACAGCAAGACTACACGTTTCGTCCGGAACTATTCGGGGTGTCCTTTAACTCTGATGACGGGTATTTCTCGCCGGCACTAAACGATGACACGTTTCAATTCACCTCCGCGCCAGACCAACTAGAAGATCTAGCTTCATTGGAAGACTACGCAACTGTGGCTGCTTCGATAAGAGAAAGATCCCCGGTCACATTCCCGTACAGTCGACGTCTGGCTGCGGTTCTAAATTCACCTCTACCGGAATCGTTGGCGGATTTCGGCGCATGCCATGGTGGTTCGCCGGTCACCTCTCCCGGTATCGGATACACGGCAAATTCACCGGGACTATCGTATACGACCGGGGATTCGCCGGGCTTAGCGTACACAGCAGCGTCGCCCGGTGGCAGTTATTCAACGCAGCCTTCGCCCGGTTTTACTTACCCAACGCCACCAGCTTCTCATGATGCTCATTCTCCGGCACACACGGTTCCTCGAGCGTCATCACCGCTATCAGCCGCTTTTTTCACTGCCACTATGTCCAGTCAAGAAGAGGTTGAAGAAGCCTTAGAAGAAGTTTTACCGGAGGAATGCAGGTCACTTGATGCCTATTCACTGGAGCCTTCGCAAACCGCACGCCGTATCATGCTCAACTCGGAAGACCCTTTGCTATCGAGCAGCCCCAGAGATTTCTCCCATCAAAGAATATTCAGGCGTCAACATCGGAGCGTCGTAAATACTACTGGACATCTACAACAATGGCAACATGATAATTCACTTCAGGTCTGCGTTGAAGGTCGAGATACGGTACCAGCTGTGTTCTTAAGTCCGAACAGTGTGCCGGCGTCACCACAACGAAGGAAACGTCGAGCATCACCTGCGGGTCCTTACCGATCAAGGATGCGAAGAGCTATCAGTCACTTCACGCCGCAACCGATGCTACCACCCGAACGCGATGGCTCTGGACTATACATAGATTTGACGGCTGGAATTCTATCAGAAAATGATGGTTTATCGCAAACGGAGGACGTTCGAAAGCCGCAAATAAATATCGGGACTAATTTCCAAGCCGAATTACCAGAGCTGTACAGCGATCGTGATGATCTACATCGAGCACCGGAACAACTCCTTTGGGATCCGGGCATAAACGAAGCGTTAGAAGACAACGAAGTACGAATGTTCATGGAACTAGCGATGTGTGCTGCTATGCCAGTCGGGGGGCACACAAGAGAATTTGCCTTACAAACTTTAGGAGAATGTGGCGGAGATATCAGAGCGGCCACTCTACGACTAATGTCAAGACCTGTGGTGCCATCGCAGCACGAGTCGCGTTGGGCGCCCGATGAAGTCGAAGCGTTCTTATCTGGACTAAGCCATTACGATAAAGACTTTTTTAGAATTTCGCAACTGGTTAGAACAAAGGACTCGAAGCAATGCGTTCAATTCTACTATTTTTGGAAGAAAGTAACGAAAGACTACAAGACCCAGTACCTAAGGAGTTGGTGTGCCGATCCGCATACATCACAAGGTTCTGTAGCACAAGTAACTACACATAGCAACACCTCGTGCACCTCATCACCGACTTCATACGACAATGAGGAGTACCCATGCAAGATATGCGGGAAAGTATTTAACAAAGTAAAAAGTCGTAGTGCACACATGAAGTCACACCGGCCTCTCGACGCCGAAACGAAAAAATCAAAACTCGAAAAGCCTTATGAAAAGGCCGAGAAATCTGATGGCAGACATAACACAACAAACGAATTTCACAAAACGTTGTAA

Protein

MRLHGGYFKKDSDSKKLDKKETTGPPLQTASVSVRALIEEKIISRRGATASSTNSPPPLSTIRASSSSPATTSAQFVPPRAPSAVTVAANLSTNMSAAQRDSTLIELLKKGNTKAVKRSASDPGHASPQQDYTFRPELFGVSFNSDDGYFSPALNDDTFQFTSAPDQLEDLASLEDYATVAASIRERSPVTFPYSRRLAAVLNSPLPESLADFGACHGGSPVTSPGIGYTANSPGLSYTTGDSPGLAYTAASPGGSYSTQPSPGFTYPTPPASHDAHSPAHTVPRASSPLSAAFFTATMSSQEEVEEALEEVLPEECRSLDAYSLEPSQTARRIMLNSEDPLLSSSPRDFSHQRIFRRQHRSVVNTTGHLQQWQHDNSLQVCVEGRDTVPAVFLSPNSVPASPQRRKRRASPAGPYRSRMRRAISHFTPQPMLPPERDGSGLYIDLTAGILSENDGLSQTEDVRKPQINIGTNFQAELPELYSDRDDLHRAPEQLLWDPGINEALEDNEVRMFMELAMCAAMPVGGHTREFALQTLGECGGDIRAATLRLMSRPVVPSQHESRWAPDEVEAFLSGLSHYDKDFFRISQLVRTKDSKQCVQFYYFWKKVTKDYKTQYLRSWCADPHTSQGSVAQVTTHSNTSCTSSPTSYDNEEYPCKICGKVFNKVKSRSAHMKSHRPLDAETKKSKLEKPYEKAEKSDGRHNTTNEFHKTL

Uniprot

A0A2A4JJ06   A0A3S2M9T4   A0A2H1WT68   A0A194PHN3   A0A194RKA4   A0A0L7LSC2   + More
J9KE46   A0A2H8TL57   A0A2S2PKN3   A0A2S2NBQ1   A0A2S2R8N2   A0A1B6D8K4   A0A1B6DCI0   A0A1B6CCX3  

Pubmed

26354079    26227816   

EMBL

NWSH01001225    PCG72047.1    RSAL01000006    RVE54322.1    ODYU01010874    SOQ56251.1    + More
KQ459604    KPI92229.1    KQ460045    KPJ18263.1    JTDY01000191    KOB78373.1    ABLF02018438    ABLF02024429    ABLF02024431    ABLF02024432    ABLF02024433    ABLF02032799    ABLF02032800    GFXV01003070    MBW14875.1    GGMR01017338    MBY29957.1    GGMR01001938    MBY14557.1    GGMS01017178    MBY86381.1    GEDC01015297    JAS22001.1    GEDC01021957    GEDC01013930    GEDC01005660    GEDC01000512    JAS15341.1    JAS23368.1    JAS31638.1    JAS36786.1    GEDC01026168    GEDC01019495    JAS11130.1    JAS17803.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000053240    UP000037510    UP000007819    + More

Pfam

PF01448   ELM2        + More
PF00096   zf-C2H2
PF00249   Myb_DNA-binding

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR001005   SANT/Myb       
IPR017884   SANT_dom       
IPR009057   Homeobox-like_sf       
IPR000949   ELM2_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF46689   SSF46689       

ProteinModelPortal

A0A2A4JJ06   A0A3S2M9T4   A0A2H1WT68   A0A194PHN3   A0A194RKA4   A0A0L7LSC2   + More
J9KE46   A0A2H8TL57   A0A2S2PKN3   A0A2S2NBQ1   A0A2S2R8N2   A0A1B6D8K4   A0A1B6DCI0   A0A1B6CCX3  

PDB

2YQK     E-value=3.38967e-06,     Score=124

KEGG

105841398    no KO assigned | (RefSeq) uncharacterized LOC105841398

GO

GO:0003677   GO:0005634   GO:0003676   GO:0046872   GO:0016020   GO:0006412   GO:0005515   GO:0000166   GO:0008408   GO:0005112   GO:0015930  

Subcellular location

Nucleus  

Length:

712

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00023

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00020

outside

1  -  712

 

 

Pi

227.37327

Theta

173.267821

Tajima's D

1.045553

CLR

1.041219

CSRT

0.674366281685916

Interpretation

Uncertain