SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15098
Pre Gene Modal
BGIBMGA005003
Annotation
hypothetical_protein_KGM_19935_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 2.951
 

Sequence

CDS
ATGCCTAGTGCCTCGTTTTCGTCTTCGCGTTCTTACGTACGTAGATCGCGGAGAAAAGGCGGTCATCGAATACCACTACCTTCTAGGACACAATCGAGTGAACCATGTGAGTCAGTTCCAATACCCAACAACGTCACGGGCAGTGCGATGGCGGCGACGGCCGCGTGTGCTGGCCCAAGCGGTGGGGGCGGAGCACCACCCGTACCTGCTGCTGCACCCGCCACCACCGCCGGCCATCATAGCCCTTACGACCTGCGCCGTAAGTCGCCACCAGCTTATCACGAGCCCGGACCTTCAGGTGCTTGCTCATTGCCGGCCAGGAAGAGACCTAGAACATCACTCTCTCAAGGCGTGGACGTGTGCAATGTCTCGCAGTACTTGCAGTATGAGCTGCCGGATGAAGTGTTGCTCTGTATCCTGTCATACTTGACTGAACGCGACCTGTGCCGTGTCGCTCAAGTCTGCAAGAGATTTAATACAATCGCGAATGATACTGAACTATGGAAAAGTTTATATCAGTCTGTGTTTGAGTATGACACTCCACTGATGCACCCAGCACCGTGCCAGTTTGAGTTTGTAGCGCCTGATGAGTGCGACGCAGACAACCCATGGAAGGAGAGCTTTCGTCAGCTCTACTATGGCATACACGTCCGCCCTAGTTTTCGTCTAAAGAAGGATTCGCGTATCAGGCATTTTAATACAATCAGGACTGCACTGGAATTCGTGGAGGAGCGGACAGGCAGCAGTGTAACCGCTAGTACGAATACCGCGGGCCCCACCACGAGCAGCTCTAGCAGTAGTGCCGCAAGCACAACCAACACCAGCAACAGTAACGTGTGCTCGTGCAACCCCACTGGCGCTTGTACGTGTCGCCGCCCGCAACCAACCCACCAACCGGCGCTAGTCTTCATACACGCTGGACTCTATCAAGAGGAATGTCTTGCTATTGATTCTGATGTGCAGCTTATTGGTTGTGCGACGGGCAATGTAGCGGAGTCTGTAGTACTTGAGCGTGAAGCGGAATCGACGCTGACGTTTGCGGAGGGAGCGACTCGGGCTTATGCCGGACACATGACGCTCAAGTTCTCACCGGATGCAACAAGTACCATGCAGCATCATAAGCACTTCTGTCTCGAGGTCTCAGATAACTGTTCACCCACAATTGATCACTGTATTATCAGGAGCGCTAGTGTTGTGGGTGCAGCAGTGTGCGTTAGCGGTGCCGGCGCGAATCCCGTAATCAAGCACTGTGACATTAGTGACTGCGAGAACGTTGGTCTCTATGTCACAGACTACGCGCAAGGCGCTTATCAGGATAATGAAATCTCAAGAAACGCCCTTGCTGGCATATGGGTCAAAAATTTTGCCAACCCTATTATGCGTCGTAACCATATACATCACGGACGTGACGTCGGTATATTTACGTTCGAGAATGGATTGGGTTACTTTGAAGCCAACGATATTCACAACAATAGAATCGCCGGTTTCGAAGTTAAGGCCGGCGCGAACCCCACCGTAGTGCACTGCGAGATCCACCACGGTCAAACTGGTGGTATTTATGTGCACGAATCTGGTTTAGGCCAATTTATTGATAACAAGATACATTCGAATAACTTTGCCGGCGTATGGATAACGTCCAACAGCAACCCCACCATACGGCGTAATGAAATATATAATGGGCATCAAGGAGGCGTGTACATATTTGGCGAAGGACGAGGTCTCATTGAACATAATAATATATATGGAAATGCTCTTGCTGGTATACAGATACGCACAAACAGTGATCCTATTGTGAGACATAATAAGATTCATCACGGGCAGCATGGAGGTATATATGTACATGAAAAAGGTCAAGGACTCATTGAAGAGAATGAAGTTTATGCCAACACATTAGCTGGTGTTTGGATAACTACTGGTTCCACACCTGTTCTGCGCCGCAACCGTATACATTCAGGAAAACAGGTTGGTGTATACTTCTATGACAATGGTCACGGCAAGTTAGAAGACAATGACATATTCAACCACCTATACTCTGGAGTTCAGATTAGGACAGGCAGCAACCCTGTTATCAGAGGAAACAAAATTTGGGGTGGTCAGAATGGTGGTGTACTTGTATACAACGGGGGCCTCGGATTGTTGGAGCAGAACGAGATATTCGATAATGCGATGGCCGGTGTATGGATTAAGACTGATTCAAACCCAACGCTCAAGAGGAATAAGATCTTCGACGGACGTGACGGGGGCATTTGTATTTTTAATGGTGGGAAGGGAGTGTTAGAAGAGAATGACATATTTCACAACGCGCAAGCAGGCGTCCTGATCTCAACGCAGAGCCATCCAGTATTACGTCGGAACAGAATCTTTGACGGACTGGCCGCCGGTGTCGAGATTACTAATAATGCAACCGCCACCCTAGAACATAATCAGATATTTAATAACAGATTCGGAGGCCTGTGTCTGGCTTCTGGCGTTACTCCTTTAGTTAGGGGAAATAAGATATTCAGCAACCAAGACGCCGTTGAAAAGGCTGTCGGCGGTGGACAGTGTCTCTACAAAATCTCTTCTTATACTTCCTTTCCGATGCACGATTTCTATAGGTGCCAGACGTGCAATACGACAGACCGCAATGCAATCTGCGTGAACTGCATCAAAACGTGCCATTCCGGTCATGACGTCGAATTTATTCGTCATGACAGGTTCTTCTGCGACTGCGGCGCGGGCACGCTCTCGAACCAGTGCCAGCTGCAGGGCGAGCCCACGCAGGACACGGACACGCTGTACGACTCGGCCGCACCCATGGAGTCGCACACGCTGATGGTCAACTGA
Protein
MPSASFSSSRSYVRRSRRKGGHRIPLPSRTQSSEPCESVPIPNNVTGSAMAATAACAGPSGGGGAPPVPAAAPATTAGHHSPYDLRRKSPPAYHEPGPSGACSLPARKRPRTSLSQGVDVCNVSQYLQYELPDEVLLCILSYLTERDLCRVAQVCKRFNTIANDTELWKSLYQSVFEYDTPLMHPAPCQFEFVAPDECDADNPWKESFRQLYYGIHVRPSFRLKKDSRIRHFNTIRTALEFVEERTGSSVTASTNTAGPTTSSSSSSAASTTNTSNSNVCSCNPTGACTCRRPQPTHQPALVFIHAGLYQEECLAIDSDVQLIGCATGNVAESVVLEREAESTLTFAEGATRAYAGHMTLKFSPDATSTMQHHKHFCLEVSDNCSPTIDHCIIRSASVVGAAVCVSGAGANPVIKHCDISDCENVGLYVTDYAQGAYQDNEISRNALAGIWVKNFANPIMRRNHIHHGRDVGIFTFENGLGYFEANDIHNNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHESGLGQFIDNKIHSNNFAGVWITSNSNPTIRRNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRTNSDPIVRHNKIHHGQHGGIYVHEKGQGLIEENEVYANTLAGVWITTGSTPVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNHLYSGVQIRTGSNPVIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIKTDSNPTLKRNKIFDGRDGGICIFNGGKGVLEENDIFHNAQAGVLISTQSHPVLRRNRIFDGLAAGVEITNNATATLEHNQIFNNRFGGLCLASGVTPLVRGNKIFSNQDAVEKAVGGGQCLYKISSYTSFPMHDFYRCQTCNTTDRNAICVNCIKTCHSGHDVEFIRHDRFFCDCGAGTLSNQCQLQGEPTQDTDTLYDSAAPMESHTLMVN

Summary

EMBL
ODYU01004018    SOQ43464.1    AGBW02013098    OWR43982.1    KQ459604    KPI92225.1    + More
BABH01030048    KQ460045    KPJ18267.1    NWSH01002042    PCG69322.1    GALX01003273    JAB65193.1    GEZM01042460    JAV79841.1    KZ288194    PBC33880.1    KQ435863    KOX70425.1    GL762111    EFZ22028.1    KQ414667    KOC64680.1    KK107185    QOIP01000012    EZA55760.1    RLU15695.1    GL888128    EGI66805.1    ADTU01028135    GL440425    EFN65916.1    GL449385    EFN82813.1    NNAY01000255    OXU29683.1    KQ971354    EFA07112.2    KQ978205    KYM96492.1    KQ982320    KYQ57805.1    KQ981897    KYN33673.1    KQ978957    KYN26988.1    KQ976488    KYM83603.1    KQ434905    KZC11237.1    KB632326    ERL92410.1    DS235339    EEB14929.1    GEDC01004665    JAS32633.1    GBYB01004393    JAG74160.1    AJWK01007835    AJWK01007836    GFDF01010502    JAV03582.1    KK853256    KDR09267.1    GECU01011689    JAS96017.1    GECZ01030862    JAS38907.1    GBHO01020430    GBHO01020429    GDHC01014286    JAG23174.1    JAG23175.1    JAQ04343.1    CH480815    EDW42802.1    PYGN01000223    PSN50779.1    CH954181    EDV49699.1    CM000364    EDX13556.1    GAMC01010442    JAB96113.1    AE014297    AAF54459.1    AGB95823.1    GBRD01010346    JAG55478.1    GBXI01013500    JAD00792.1    BT010305    AAQ23623.1    CM000160    EDW96737.1    JXJN01002887    JXJN01002888    GFDL01003417    JAV31628.1    GFDL01003414    JAV31631.1    GFDL01003415    JAV31630.1    GFDL01003416    JAV31629.1    CH916369    EDV93322.1    CH940650    EDW67481.1    GDHF01027306    GDHF01025266    GDHF01021813    GDHF01018596    GDHF01018128    GDHF01015803    GDHF01000512    JAI25008.1    JAI27048.1    JAI30501.1    JAI33718.1    JAI34186.1    JAI36511.1    JAI51802.1    GDIP01011420    JAM92295.1    GL732612    EFX71222.1    CP012526    ALC46338.1    CM000070    EAL27715.2    CH479179    EDW24747.1    GDIQ01128961    JAL22765.1    LRGB01000915    KZS15283.1    GDUN01001133    JAN94786.1    UFQT01000217    SSX21844.1    CH902617    EDV42160.1    OUUW01000007    SPP82831.1    GANO01000605    JAB59266.1    GDKW01000524    JAI56071.1    CH964272    EDW85175.1    CCAG010018315    JRES01000409    KNC31598.1    GFTR01008181    JAW08245.1    GBGD01000440    JAC88449.1    GBBI01002260    JAC16452.1    CH933806    EDW14465.1    CVRI01000039    CRK94645.1    GDIP01148680    JAJ74722.1    GEFM01004449    JAP71347.1    GEGO01000592    JAR94812.1    ACPB03006020    GACK01003230    JAA61804.1    GFAC01002714    JAT96474.1    GFPF01007740    MAA18886.1    NCKU01007020    RWS02959.1    NCKU01004506    RWS05855.1    JH431693    GANP01007233    JAB77235.1    GGMS01014158    MBY83361.1    GBBM01000506    JAC34912.1    GFAA01001882    JAU01553.1    GACK01001375    JAA63659.1    ABLF02018337    ABLF02018338    ABLF02018340    ABLF02018341    ABLF02018342   
Pfam
PF02207   zf-UBR        + More
PF05048   NosD
PF12937   F-box-like
PF13229   Beta_helix
Interpro
IPR011050   Pectin_lyase_fold/virulence        + More
IPR006633   Carb-bd_sugar_hydrolysis-dom       
IPR006626   PbH1       
IPR007742   NosD_dom       
IPR012334   Pectin_lyas_fold       
IPR022441   Para_beta_helix_rpt-2       
IPR036047   F-box-like_dom_sf       
IPR001810   F-box_dom       
IPR003126   Znf_UBR       
IPR039448   Beta_helix       
IPR029799   FBX11/DRE-1       
IPR023828   Peptidase_S8_Ser-AS       
SUPFAM
SSF81383   SSF81383        + More
SSF51126   SSF51126       
Gene 3D
PDB
5VMD     E-value=4.20384e-35,     Score=374

Ontologies

Topology

Length:
941
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00431
Exp number, first 60 AAs:
0.00046
Total prob of N-in:
0.00006
outside
1  -  941
 
 

Population Genetic Test Statistics

Pi
252.358231
Theta
189.239514
Tajima's D
0.857479
CLR
0.141499
CSRT
0.621118944052797
Interpretation
Uncertain
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