Gene

KWMTBOMO15096

Pre Gene Modal

BGIBMGA004835

Annotation

PREDICTED:_RAB6A-GEF_complex_partner_protein_2_[Amyelois_transitella]

Location

Bomo_Chr25(-):4795069-4797186      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.005

CDS

ATGATCGAACTATCCGCTAAATTGACTACAGGAACTGTATATTTAGCTGGTGAAGCAATAGAATGTTGTATTTCTTTCTGTTATACAGCTCAACCTGAACATAGGAACTCGCAAAGCCACAGTGACACATTAGAAAATCTAGCTTGGGCTTCAGCACAGTTCCATTGCTTCTATTCAACGTCAGGGGCTCAAGGTGACAAAACCCCAATATTAGGGAAAACAACTTCTTTGGAAGTAGCAGCCTGTGATGTTGGAGACGCAGTGTTCCATAGTAAACCTAAAATATTGTTCTGTGACTTGACTATACCACTAGGTGAAACGAAAACATTCTGGTACAGAGAATCTCTCCCCATAGAAGCACCGCCATCATACAGAGGTACTTCAGTGAAATACTCATATAAAATAACAATAGCAACACAAAAAGTGGGGTCTCACATTAAAATGGTCAGAATTCCGTTTAGAGTGTTGCCAATAAGCCCAATAATAAATATGCAAGATCTTGCTGCTTTGTGTGGTAATGAAACTACTGAGGAACTTCACCCGACTAATCCATTTTCTGAGGAGAGGAAAGTGGAGACACCATTGACTATGGCATTGCAGGTTTTACAGAATTTGACAGCAAGAAGAAGTCCAAATTCATACATGATAACCAACACCCGAGGAAAAGTAGGCAGGTTCTGCATGTTTAAATCAGCATATAAACTCGGAGAAGATATTGTTGGTACATTTGATTTCTCTGTTGGAACAGTTACTTGTATGCAGGTAATTAAATTGTTTAATATAGTATGA

Protein

MIELSAKLTTGTVYLAGEAIECCISFCYTAQPEHRNSQSHSDTLENLAWASAQFHCFYSTSGAQGDKTPILGKTTSLEVAACDVGDAVFHSKPKILFCDLTIPLGETKTFWYRESLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFRVLPISPIINMQDLAALCGNETTEELHPTNPFSEERKVETPLTMALQVLQNLTARRSPNSYMITNTRGKVGRFCMFKSAYKLGEDIVGTFDFSVGTVTCMQVIKLFNIV

Similarity

Belongs to the peptidase S8 family.

Uniprot

H9J5P5   A0A2H1WY95   A0A2A4JC34   A0A1E1WCU5   A0A194PGQ7   A0A194RLH4   + More
A0A212ERA5   A0A0T6BGQ3   A0A1B0GNB1   A0A1L8DCV5   D6WQI4   J3JZK9   A0A2A3EIH9   A0A088ANP4   A0A154NZV7   E2C6R1   A0A1Y1MV04   A0A310SDA1   K7IR43   A0A026WZ65   A0A3L8D4M7   F4WYW7   A0A195EBI9   E2AZ54   A0A151WFM5   A0A158NC78   A0A0L7QY34   A0A1W4WUR7   A0A151HZQ4   A0A195CEG4   E9ILX1   A0A195FAV2   A0A2P8XV54   B0X4Q8   A0A1Q3F4T7   A0A2J7R6P1   A0A2J7R6R6   Q17CR6   W5JHJ3   A0A2M4ART5   A0A067QWW0   A0A182Q0S6   A0A182RNN1   A0A1B6CB05   A0A182Y4D9   A0A182NFM2   A0A182PAC1   A0A182V754   A0A182KAS2   A0A182WRG7   A0A182HUB0   Q7PGR9   U5EY67   A0A182U244   A0A336K0S1   A0A1B6K8F0   A0A084VDW9   A0A1B6FQB3   A0A182W093   A0A182LFQ9   A0A224XED2   T1HNM5   A0A182F7G7   A0A069DTN7   A0A1B6M7T0   A0A2S2PU09   A0A0V0G893   A0A2H8TXW1   A0A2R7VWW7   A0A1J1HRF0   A0A3Q0IYK8   A0A2S2NRM2   J9JS23   A0A2S2Q7T0   A0A0P4VQR7   A0A087UIY3   B4KCM7   A0A1W4UX57   A0A1I8PJ63   B4NI72   T1IMB0   A0A1I8PJ07   A0A034VBY0   A0A2P6L1U6   B4GFF3   A0A0K8VBN3   Q296A5   W8B7D2   A0A182GNW8   A0A1I8PIZ5   A0A3B0KHN1   B3P298   A0A1S3K557   A0A0C4DHA5   A0A0R1E043   B3M166   B4I3W7   B4M4Y2   Q9VN84  

Pubmed

19121390    26354079    22118469    18362917    19820115    22516182    + More
23537049    20798317    28004739    20075255    24508170    30249741    21719571    21347285    21282665    29403074    17510324    20920257    23761445    24845553    25244985    12364791    14747013    17210077    24438588    20966253    26334808    27129103    17994087    25348373    15632085    24495485    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304   

EMBL

BABH01024941    ODYU01011986    SOQ58043.1    NWSH01002042    PCG69326.1    GDQN01006279    + More
JAT84775.1    KQ459604    KPI92223.1    KQ460045    KPJ18269.1    AGBW02013098    OWR43984.1    LJIG01000869    KRT86071.1    AJVK01013103    GFDF01009786    JAV04298.1    KQ971354    EFA06979.1    APGK01059435    BT128691    KB741293    KB632046    AEE63648.1    ENN70268.1    ERL88277.1    KZ288254    PBC30801.1    KQ434782    KZC04624.1    GL453161    EFN76373.1    GEZM01026151    JAV87207.1    KQ761108    OAD58193.1    KK107061    EZA61355.1    QOIP01000014    RLU14963.1    GL888463    EGI60621.1    KQ979236    KYN22184.1    GL444081    EFN61291.1    KQ983211    KYQ46585.1    ADTU01011672    KQ414695    KOC63530.1    KQ976642    KYM78672.1    KQ977873    KYM99192.1    GL764129    EFZ18473.1    KQ981727    KYN37169.1    PYGN01001299    PSN35883.1    DS232350    EDS40475.1    GFDL01012460    JAV22585.1    NEVH01006756    PNF36507.1    PNF36506.1    CH477305    EAT44129.1    ADMH02001371    ETN62778.1    GGFK01009987    MBW43308.1    KK853153    KDR10571.1    AXCN02000238    GEDC01026655    JAS10643.1    APCN01000616    AAAB01008859    EAA44830.1    GANO01000559    JAB59312.1    UFQS01000046    UFQT01000046    SSW98506.1    SSX18892.1    GECU01000022    JAT07685.1    ATLV01011840    KE524725    KFB36163.1    GECZ01017409    GECZ01001899    JAS52360.1    JAS67870.1    GFTR01005590    JAW10836.1    ACPB03021429    GBGD01001842    JAC87047.1    GEBQ01016751    GEBQ01007998    JAT23226.1    JAT31979.1    GGMR01020341    MBY32960.1    GECL01001880    JAP04244.1    GFXV01006954    MBW18759.1    KK854095    PTY11180.1    CVRI01000020    CRK90623.1    GGMR01007222    MBY19841.1    ABLF02021296    GGMS01004571    MBY73774.1    GDKW01002402    JAI54193.1    KK120002    KFM77322.1    CH933806    EDW15876.1    CH964272    EDW84764.1    JH431009    GAKP01018928    JAC40024.1    MWRG01002483    PRD32559.1    CH479182    EDW34338.1    GDHF01016077    JAI36237.1    CM000070    EAL28553.1    GAMC01012058    JAB94497.1    JXUM01077275    KQ562998    KXJ74676.1    OUUW01000008    SPP84611.1    CH954181    EDV47848.1    AE014297    AAF52064.3    CM000160    KRK02662.1    CH902617    EDV44336.1    CH480821    EDW54910.1    CH940652    EDW59693.1    AAF52065.2   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000092462    + More
UP000007266    UP000019118    UP000030742    UP000242457    UP000005203    UP000076502    UP000008237    UP000002358    UP000053097    UP000279307    UP000007755    UP000078492    UP000000311    UP000075809    UP000005205    UP000053825    UP000192223    UP000078540    UP000078542    UP000078541    UP000245037    UP000002320    UP000235965    UP000008820    UP000000673    UP000027135    UP000075886    UP000075900    UP000076408    UP000075884    UP000075885    UP000075903    UP000075881    UP000076407    UP000075840    UP000007062    UP000075902    UP000030765    UP000075920    UP000075882    UP000015103    UP000069272    UP000183832    UP000079169    UP000007819    UP000054359    UP000009192    UP000192221    UP000095300    UP000007798    UP000008744    UP000001819    UP000069940    UP000249989    UP000268350    UP000008711    UP000085678    UP000000803    UP000002282    UP000007801    UP000001292    UP000008792   

PRIDE

H9J5P5    Q9VN84   

Pfam

PF08737   Rgp1        + More
PF08373   RAP
PF01483   P_proprotein
PF08368   FAST_2
PF04547   Anoctamin
PF16470   S8_pro-domain
PF00082   Peptidase_S8

Interpro

IPR014848   Rgp1        + More
IPR015500   Peptidase_S8_subtilisin-rel       
IPR038466   S8_pro-domain_sf       
IPR013579   FAST_2       
IPR000209   Peptidase_S8/S53_dom       
IPR008979   Galactose-bd-like_sf       
IPR036852   Peptidase_S8/S53_dom_sf       
IPR006212   Furin_repeat       
IPR023827   Peptidase_S8_Asp-AS       
IPR002884   P_dom       
IPR007632   Anoctamin       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR022398   Peptidase_S8_His-AS       
IPR016017   GDNF/GAS1       
IPR032815   S8_pro-domain       
IPR034182   Kexin/furin       
IPR013584   RAP       
IPR023828   Peptidase_S8_Ser-AS       

SUPFAM

SSF57184   SSF57184        + More
SSF52743   SSF52743       
SSF49785   SSF49785       

Gene 3D

2.60.120.260     3.30.70.850     3.40.50.200    

CDD

cd00064  FU
cd04059  Peptidases_S8_Protein_converta

ProteinModelPortal

H9J5P5   A0A2H1WY95   A0A2A4JC34   A0A1E1WCU5   A0A194PGQ7   A0A194RLH4   + More
A0A212ERA5   A0A0T6BGQ3   A0A1B0GNB1   A0A1L8DCV5   D6WQI4   J3JZK9   A0A2A3EIH9   A0A088ANP4   A0A154NZV7   E2C6R1   A0A1Y1MV04   A0A310SDA1   K7IR43   A0A026WZ65   A0A3L8D4M7   F4WYW7   A0A195EBI9   E2AZ54   A0A151WFM5   A0A158NC78   A0A0L7QY34   A0A1W4WUR7   A0A151HZQ4   A0A195CEG4   E9ILX1   A0A195FAV2   A0A2P8XV54   B0X4Q8   A0A1Q3F4T7   A0A2J7R6P1   A0A2J7R6R6   Q17CR6   W5JHJ3   A0A2M4ART5   A0A067QWW0   A0A182Q0S6   A0A182RNN1   A0A1B6CB05   A0A182Y4D9   A0A182NFM2   A0A182PAC1   A0A182V754   A0A182KAS2   A0A182WRG7   A0A182HUB0   Q7PGR9   U5EY67   A0A182U244   A0A336K0S1   A0A1B6K8F0   A0A084VDW9   A0A1B6FQB3   A0A182W093   A0A182LFQ9   A0A224XED2   T1HNM5   A0A182F7G7   A0A069DTN7   A0A1B6M7T0   A0A2S2PU09   A0A0V0G893   A0A2H8TXW1   A0A2R7VWW7   A0A1J1HRF0   A0A3Q0IYK8   A0A2S2NRM2   J9JS23   A0A2S2Q7T0   A0A0P4VQR7   A0A087UIY3   B4KCM7   A0A1W4UX57   A0A1I8PJ63   B4NI72   T1IMB0   A0A1I8PJ07   A0A034VBY0   A0A2P6L1U6   B4GFF3   A0A0K8VBN3   Q296A5   W8B7D2   A0A182GNW8   A0A1I8PIZ5   A0A3B0KHN1   B3P298   A0A1S3K557   A0A0C4DHA5   A0A0R1E043   B3M166   B4I3W7   B4M4Y2   Q9VN84  

KEGG

101739575    K20477 RAB6A-GEF complex partner protein 2 | (RefSeq) RAB6A-GEF complex partner protein 2

GO

GO:0005829   GO:0042147   GO:0034066   GO:0017112   GO:0000139   GO:0017137   GO:0004252   GO:0016021   GO:0043547  

PANTHER

PTHR12507  

Length:

262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.34804

Exp number, first 60 AAs:

0.0306

Total prob of N-in:

0.03491

outside

1  -  262

 

 

Pi

15.731028

Theta

16.840309

Tajima's D

-0.356734

CLR

0.22117

CSRT

0.276036198190091

Interpretation

Uncertain