Gene

KWMTBOMO15095

Pre Gene Modal

BGIBMGA004835

Annotation

PREDICTED:_RAB6A-GEF_complex_partner_protein_2_[Papilio_machaon]

Location

Bomo_Chr25(-):4791593-4793066      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.417 Mitochondrial   Reliability : 1.117

CDS

ATGACAGTAGCAAGATATCACGAAGTGACATTGGGCCTGACTCAGTCTCAACTAATACTACCAATACCCCTGCACATAACGCCTGCTTTTGAAGTGGATGATGTTTCATTACAATGGCGTCTACATTTCGAGTTTGTTACCACTAATGAAAAACTAGTACCAAATCCCGAAGACAAAGACTGGAATGCTCCATTGAATGTTCCCATAGAAACAATGGTGTGGAATTTGCCCGTTAAAATATATTCGACTTTACCAAAAGAAATTATGCATCATACTGTAGGTACAGATGCATATACATTAAATATTAAATGA

Protein

MTVARYHEVTLGLTQSQLILPIPLHITPAFEVDDVSLQWRLHFEFVTTNEKLVPNPEDKDWNAPLNVPIETMVWNLPVKIYSTLPKEIMHHTVGTDAYTLNIK

Uniprot

H9J5P5   A0A2H1WY95   A0A2A4JC34   A0A1E1WCU5   A0A194RLH4   S4P7F1   + More
A0A194PGQ7   A0A212ERA5   A0A1J1HRF0   A0A1B0CKC0   D6WQI4   J3JZK9   A0A1L8DCV5   A0A2P8XV54   A0A1W4WUR7   A0A1B0GNB1   Q17CR6   A0A067QWW0   A0A182GNW8   A0A2J7R6R6   U5EY67   A0A1Q3F4T7   B0X4Q8   A0A1Y1MV04   A0A0T6BGQ3   A0A2M3ZDI1   A0A2M3ZDI5   A0A2M4C038   A0A182Y4D9   A0A182J8Z2   A0A182KAS2   A0A182PAC1   A0A182RNN1   A0A1B6CB05   B4QW82   B4I3W7   Q8IPP2   B3M166   A0A084VDW9   A0A0C4DHA5   Q9VN84   A0A1W4UX57   B4JSQ1   A0A3B0KHN1   F5HK98   A0A182LZW4   A0A182T1F4   B4NI72   A0A0P6A8E2   Q296A5   W5JHJ3   B4GFF3   A0A0Q9X127   A0A2M4ART5   B4KCM7   B4PV63   A0A0R1E043   A0A182HUB0   T1PIJ8   A0A1I8NGZ6   A0A182F7G7   A0A1I8PIZ5   A0A182W093   B3P298   A0A154NZV7   A0A1D2NES4   B4M4Y2   A0A0P5UW27   A0A0P6G7K1   A0A0P5Z5X0   A0A0P5DMG1   A0A0P5B1H6   A0A0P5JET3   A0A0P5U149   A0A0P5CI45   A0A336K0S1   A0A0P6DG15   A0A0P6HZW5   A0A0P6FAP0   A0A182V754   A0A182WRG7   Q7PGR9   A0A182U244   E0VV71   A0A0M8ZV87   A0A0L0C7E0   E9FUY6   A0A182NFM2   A0A3Q0IYK8   A0A0L7QY34   A0A0P4WDR8   A0A195CEG4   A0A0N7ZX18   A0A310SDA1   A0A2A3EIH9   A0A088ANP4   A0A034VBY0   A0A151WFM5   W8BZ46   A0A195FAV2  

Pubmed

19121390    26354079    23622113    22118469    18362917    19820115    + More
22516182    23537049    29403074    17510324    24845553    26483478    28004739    25244985    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    12364791    15632085    20920257    23761445    17550304    25315136    27289101    14747013    17210077    20566863    26108605    21292972    25348373    24495485   

EMBL

BABH01024941    ODYU01011986    SOQ58043.1    NWSH01002042    PCG69326.1    GDQN01006279    + More
JAT84775.1    KQ460045    KPJ18269.1    GAIX01006406    JAA86154.1    KQ459604    KPI92223.1    AGBW02013098    OWR43984.1    CVRI01000020    CRK90623.1    AJWK01015969    KQ971354    EFA06979.1    APGK01059435    BT128691    KB741293    KB632046    AEE63648.1    ENN70268.1    ERL88277.1    GFDF01009786    JAV04298.1    PYGN01001299    PSN35883.1    AJVK01013103    CH477305    EAT44129.1    KK853153    KDR10571.1    JXUM01077275    KQ562998    KXJ74676.1    NEVH01006756    PNF36506.1    GANO01000559    JAB59312.1    GFDL01012460    JAV22585.1    DS232350    EDS40475.1    GEZM01026151    JAV87207.1    LJIG01000869    KRT86071.1    GGFM01005856    MBW26607.1    GGFM01005863    MBW26614.1    GGFJ01009535    MBW58676.1    GEDC01026655    JAS10643.1    CM000364    EDX11681.1    CH480821    EDW54910.1    AE014297    BT010211    BT150425    AAN13262.1    AAQ23529.1    AHB37787.1    CH902617    EDV44336.1    ATLV01011840    KE524725    KFB36163.1    AAF52064.3    AAF52065.2    CH916373    EDV94791.1    OUUW01000008    SPP84611.1    AAAB01008859    EGK96650.1    AXCM01001259    CH964272    EDW84764.1    GDIP01034162    JAM69553.1    CM000070    EAL28553.1    ADMH02001371    ETN62778.1    CH479182    EDW34338.1    CH933806    KRG01788.1    GGFK01009987    MBW43308.1    EDW15876.1    CM000160    EDW95732.1    KRK02662.1    APCN01000616    KA648591    AFP63220.1    CH954181    EDV47848.1    KQ434782    KZC04624.1    LJIJ01000065    ODN03732.1    CH940652    EDW59693.1    GDIP01107899    JAL95815.1    GDIQ01037427    JAN57310.1    GDIP01049213    JAM54502.1    GDIP01171287    JAJ52115.1    GDIP01191247    JAJ32155.1    GDIQ01201062    JAK50663.1    GDIQ01125592    GDIP01123594    JAL26134.1    JAL80120.1    GDIP01171285    LRGB01002978    JAJ52117.1    KZS05271.1    UFQS01000046    UFQT01000046    SSW98506.1    SSX18892.1    GDIQ01077912    JAN16825.1    GDIQ01011609    JAN83128.1    GDIQ01063126    JAN31611.1    EAA44830.1    DS235804    EEB17277.1    KQ435833    KOX71647.1    JRES01000819    KNC28161.1    GL732525    EFX88834.1    KQ414695    KOC63530.1    GDRN01045512    JAI66851.1    KQ977873    KYM99192.1    GDIP01204193    JAJ19209.1    KQ761108    OAD58193.1    KZ288254    PBC30801.1    GAKP01018928    JAC40024.1    KQ983211    KYQ46585.1    GAMC01012056    JAB94499.1    KQ981727    KYN37169.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000183832    + More
UP000092461    UP000007266    UP000019118    UP000030742    UP000245037    UP000192223    UP000092462    UP000008820    UP000027135    UP000069940    UP000249989    UP000235965    UP000002320    UP000076408    UP000075880    UP000075881    UP000075885    UP000075900    UP000000304    UP000001292    UP000000803    UP000007801    UP000030765    UP000192221    UP000001070    UP000268350    UP000007062    UP000075883    UP000075901    UP000007798    UP000001819    UP000000673    UP000008744    UP000009192    UP000002282    UP000075840    UP000095301    UP000069272    UP000095300    UP000075920    UP000008711    UP000076502    UP000094527    UP000008792    UP000076858    UP000075903    UP000076407    UP000075902    UP000009046    UP000053105    UP000037069    UP000000305    UP000075884    UP000079169    UP000053825    UP000078542    UP000242457    UP000005203    UP000075809    UP000078541   

PRIDE

H9J5P5    Q8IPP2    Q9VN84   

Pfam

PF08737   Rgp1

Interpro

IPR014848   Rgp1       

ProteinModelPortal

H9J5P5   A0A2H1WY95   A0A2A4JC34   A0A1E1WCU5   A0A194RLH4   S4P7F1   + More
A0A194PGQ7   A0A212ERA5   A0A1J1HRF0   A0A1B0CKC0   D6WQI4   J3JZK9   A0A1L8DCV5   A0A2P8XV54   A0A1W4WUR7   A0A1B0GNB1   Q17CR6   A0A067QWW0   A0A182GNW8   A0A2J7R6R6   U5EY67   A0A1Q3F4T7   B0X4Q8   A0A1Y1MV04   A0A0T6BGQ3   A0A2M3ZDI1   A0A2M3ZDI5   A0A2M4C038   A0A182Y4D9   A0A182J8Z2   A0A182KAS2   A0A182PAC1   A0A182RNN1   A0A1B6CB05   B4QW82   B4I3W7   Q8IPP2   B3M166   A0A084VDW9   A0A0C4DHA5   Q9VN84   A0A1W4UX57   B4JSQ1   A0A3B0KHN1   F5HK98   A0A182LZW4   A0A182T1F4   B4NI72   A0A0P6A8E2   Q296A5   W5JHJ3   B4GFF3   A0A0Q9X127   A0A2M4ART5   B4KCM7   B4PV63   A0A0R1E043   A0A182HUB0   T1PIJ8   A0A1I8NGZ6   A0A182F7G7   A0A1I8PIZ5   A0A182W093   B3P298   A0A154NZV7   A0A1D2NES4   B4M4Y2   A0A0P5UW27   A0A0P6G7K1   A0A0P5Z5X0   A0A0P5DMG1   A0A0P5B1H6   A0A0P5JET3   A0A0P5U149   A0A0P5CI45   A0A336K0S1   A0A0P6DG15   A0A0P6HZW5   A0A0P6FAP0   A0A182V754   A0A182WRG7   Q7PGR9   A0A182U244   E0VV71   A0A0M8ZV87   A0A0L0C7E0   E9FUY6   A0A182NFM2   A0A3Q0IYK8   A0A0L7QY34   A0A0P4WDR8   A0A195CEG4   A0A0N7ZX18   A0A310SDA1   A0A2A3EIH9   A0A088ANP4   A0A034VBY0   A0A151WFM5   W8BZ46   A0A195FAV2  

KEGG

101739575    K20477 RAB6A-GEF complex partner protein 2 | (RefSeq) RAB6A-GEF complex partner protein 2

GO

GO:0005829   GO:0042147   GO:0034066   GO:0017112   GO:0000139   GO:0017137   GO:0016021   GO:0043547  

PANTHER

PTHR12507  

Length:

103

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04512

Exp number, first 60 AAs:

0.04247

Total prob of N-in:

0.57349

inside

1  -  103

 

 

Pi

375.787635

Theta

211.127955

Tajima's D

2.660385

CLR

0.022138

CSRT

0.95665216739163

Interpretation

Uncertain