Gene

KWMTBOMO15092

Annotation

Tubulin--tyrosine_ligase-like_protein_12_[Operophtera_brumata]

Location

Bomo_Chr25(-):4770017-4771826      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.792

CDS

ATGCAAATAACAGCAGATTCGATTGAAGGCAAGATACATGAAATTTCTCAGCAAGTTTGGAAGTATGCCAACACTTATGCCATAGGAGAAAATGTAGAGGAAGGTGATGTCATCACTAGAAATTTTGTAGAGGGTCAGTTTTCTGATCCACTTCAAAGAGAAGCTATGCTTATTCCCTGGAAACAGTATGAACATTTTGATGAAGATTTTACTCAAAAAGAACCAGATGTGAATTATTTTCTTGAAGGACATATTAGTGAAACTTTACCAGATTTAGAATTACTGCAGAATAGGGAAACACCAACAAAATTGAAAGTATATGCAGAATATAGATTTGCCAATAAACCATTTTCATTGGACAATTTTGAAGATTATGAGAAGCATTTTACAGTCATGAACTATGAACAAGAAGCACATCTGTTTAAAATGTTATCTGACCTTTTTACAGCTGCTACATCTAAGGAACCTCCTTGTGGTATTGCCAAAAGTCCACAATCCCGAGCCCTTTATGCTGCAGACTTGATGTTATCCTGGCATCAATCAAATGGTGAGACAGTAGTACAACCTAAAATATTAGAGATAAACTGGATGCCAGACTGTGCTCGAGCATGTGAATATTATCCTGAATTCTACAATGATATATTCTCTTTAATGTTTTTGGATAAAAATGGAGAAACTCTTACCAAAGTTTTGTAA

Protein

MQITADSIEGKIHEISQQVWKYANTYAIGENVEEGDVITRNFVEGQFSDPLQREAMLIPWKQYEHFDEDFTQKEPDVNYFLEGHISETLPDLELLQNRETPTKLKVYAEYRFANKPFSLDNFEDYEKHFTVMNYEQEAHLFKMLSDLFTAATSKEPPCGIAKSPQSRALYAADLMLSWHQSNGETVVQPKILEINWMPDCARACEYYPEFYNDIFSLMFLDKNGETLTKVL

Uniprot

A0A2A4JD17   A0A2H1WQ94   A0A1E1WPG8   A0A194PM79   A0A194RL51   A0A212ER79   + More
A0A1B6GXT4   A0A1B6L5U6   A0A2P8YS31   B3N9E2   A0A087TTE0   A0A0T6ASV6   B4P240   A0A0J9TVN9   N6UKQ0   B4KSY5   Q7JVG6   A0A3Q0R5E6   A0A3Q2WL92   A0A336LIQ2   I3K1Y0   A0A1A7YT33   A0A1A7XL51   A0A0M4EIC6   A0A3Q3ARD6   W5ND60   A0A2D4ERU6   A0A1A8QDB8  

Pubmed

26354079    22118469    29403074    17994087    17550304    22936249    + More
23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25186727   

EMBL

NWSH01002042    PCG69330.1    ODYU01010189    SOQ55142.1    GDQN01002180    JAT88874.1    + More
KQ459604    KPI92220.1    KQ460045    KPJ18272.1    AGBW02013098    OWR43987.1    GECZ01002529    JAS67240.1    GEBQ01021113    JAT18864.1    PYGN01000399    PSN47034.1    CH954177    EDV59629.1    KK116649    KFM68379.1    LJIG01022907    KRT78121.1    CM000157    EDW89241.2    CM002911    KMY92100.1    APGK01029409    KB740734    ENN79262.1    CH933808    EDW08482.1    AE013599    AY118960    AAF59188.2    AAM50820.1    UFQT01000014    SSX17710.1    AERX01022819    HADX01011131    SBP33363.1    HADW01017159    SBP18559.1    CP012524    ALC40817.1    AHAT01025674    AHAT01025675    AHAT01025676    AHAT01025677    AHAT01025678    AHAT01025679    AHAT01025680    IACJ01011327    LAA37972.1    HAEH01011151    SBR91516.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000245037    UP000008711    + More
UP000054359    UP000002282    UP000019118    UP000009192    UP000000803    UP000261340    UP000264840    UP000005207    UP000092553    UP000264800    UP000018468   

PRIDE

Q7JVG6   

Pfam

PF03133   TTL

Interpro

IPR004344   TTL/TTLL_fam        + More
IPR013815   ATP_grasp_subdomain_1       
IPR027749   TTLL12       

Gene 3D

3.30.1490.20    

ProteinModelPortal

A0A2A4JD17   A0A2H1WQ94   A0A1E1WPG8   A0A194PM79   A0A194RL51   A0A212ER79   + More
A0A1B6GXT4   A0A1B6L5U6   A0A2P8YS31   B3N9E2   A0A087TTE0   A0A0T6ASV6   B4P240   A0A0J9TVN9   N6UKQ0   B4KSY5   Q7JVG6   A0A3Q0R5E6   A0A3Q2WL92   A0A336LIQ2   I3K1Y0   A0A1A7YT33   A0A1A7XL51   A0A0M4EIC6   A0A3Q3ARD6   W5ND60   A0A2D4ERU6   A0A1A8QDB8  

KEGG

101740443    K16609 tubulin--tyrosine ligase-like protein 12 | (RefSeq) tubulin--tyrosine ligase-like protein 12

GO

GO:0006464   GO:0005524   GO:0016874   GO:0018094   GO:0070735   GO:0008270   GO:0005840   GO:0006412   GO:0005515   GO:0000166   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR46088  

Length:

231

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06129

outside

1  -  231

 

 

Pi

203.458903

Theta

203.643213

Tajima's D

0.291153

CLR

0.436488

CSRT

0.450677466126694

Interpretation

Uncertain