Gene

KWMTBOMO15089

Pre Gene Modal

BGIBMGA014080

Annotation

PREDICTED:_autophagy-related_protein_2_homolog_A-like_[Bombyx_mori]

Location

Bomo_Chr25(+):4728427-4743219      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.568 Nuclear   Reliability : 1.903

CDS

ATGGCATGCAATGCAATGCATGCCATCGATAGACAGCATGTCATTGATATACAGGATGAAAAGCGTGGGGGAGAGCACCGAACTTTGTGGAACGCCAGCGTTAATGATCATCGTATCAGAACAGGCACCGTCTACAACGACCGTGATGTTCCGCCCATCCAAAAAGCTAGCGATCCACTTGCAGAGACCCTCGGGGATTCCGTAAGATGGGTCCTGACGTCTCCTGGCATCAACCCATGCCGCGTATGCGGACCGCTTAAGGTGTGCAGCATCCCTACTGGCATTGTTATACCAGGGTCTGCCGCGACCCCCAACGAGCACCTCAGAGGAGAGAATAAACAATTCCATCCCCTGGAGCACTACGTCTTTAAGACAGTCCGCACAGACGTCAGGATCGGTAGAGGAAAAGCAGAACCGTCCCCATGGGTTAAATCCGGCGGCGATGGGAGCAACACCGACGACGAATACTGTTTCGTGGAGACCCAACCCAGCAGTCAGGACAACGATCTGGATGAGCCAGTCGTGAACTGGATCGGTTCAGGGCCGGCCTACATGTTCGACAATCACTTCAGCGTTCCCGCTGCTAGGACTGATGTACTTAAAGCACCGAAGAGTTTCCCATTGCCGATGTTGCGGTACACGTTGTGCGAAATGAGCATCACATGGAACATGTACGGGGGCAATGACTTCCGTAATCCCGCCGACGCGGTATCTTCCAAGAAAACGGTCACCATAGATGACAATCGTAAATTAGGATCCCCTACCTCTGTAAAGCGCAGTAAAGACTACGAGCCGTACGAGAGCGGCCGCGCCATTGCAGCCGCGTACAGAAGCGGCGGGGTCGGCTGGGCGGCGGGCGCCGACCGAGTGCGGACCAACACGCGCGCGAGCGTGAAGCGCAGGGAACTACGCACCAGGGGCGGACCTCAACGCGACCACAAGACGAAGGTCAAACTGTGCCTCACTAAAGTGAAATTCCAATACGAGGTGTATCCTTCTGGTGGCATGCACGCGTCCCGGCAAACCCTCGCGATCAGCAAGATCGAAGTATTGGATCAACTTGAGTGCAGCGACATCAACAAGCTTCTCAGCCAGTACAAGTTGAAAGACGAGCCGGAGAGAAAAAACGCCCATATGTTAGTTGTGAAAGCGGTACACCTGCGTCCAGACCCAGCACTGACGGCCCAGGAGTGCTGCCTCAAGATATCTCTGTTGCCGCTCTGGTTCAACCTCGACCAAGACACGTTGGGCTTCTTGATGGGATACTTTTCTAAATTAGGGTCTGATGAATGCAGCGGTGAAGACGACTCAAAAAGCGTCGGAGGTCTGTCGACGGACTCGAGCGGGTCGAGACAGACCACGCCCACCCACCGGCCCCCCGTCATGACCATCGCGAGCCACCTCAAGGACCCGCCCCCCACCCCCACCTCGCTGGGGGACGCTGATGCCCTATCGCTCAACGAAACTGTGCTTCGCGATGAAGAGCCTCTAATGGAGACATACGAAGCGGAACGTCTGGTCTCCGAGAACCTGATCCAGCTCGAGGAAGACTTCAACAAACTGGGCATCGATCAAGGGAAACCGGCCGCGAAGCTACCCGTCGACGCTGAGCCCGTCGACGACTCACCGATTTACTTCAGACGCGTGGTGTTTTCCCCGGAAGTACCCATACGGTTGGACTACGTGGGCAAACGCGTGGACCTGTCGTCTGGTCCGGTCGCTGGCCTGCTCATGGGACTGGGACAGCTCAACTGCTCCGAACTCACACTGAAGAGGCTTGACTACAAACTTGGATTGTTGGGCACTGAGAAACTAGTTCAGTGGGCGTTGCACGAATGGCTCTCCGACATAAAGAGGCATCAACTACCGGGATTGCTCAGTGGAATAGGACCGATGCACTCGCTTTTACAACTCATAACCGGCATCCGCGACCTGGTGTGGCTGCCGGTGGAGCAGTGGCGGCGCGACGGGCGGCTGGTGCACGGGCTGCGGCGCGGCGCGGCCTCCTTCACGGCGCGCACCGCCGTCGCCGCGCTCGACATCACCACGCGCATCCTGCACCTCATACAGGCCACAGCAGAGACAGCATTCGACATGCTGACCCCCGGGCCGACCCTGCAGCTGCAAGACGCGTACAACCGCCGGGAGAGGCGTCGCCGGCGGCGGCTGGACCCCTCGCGTCATCCTACTGATATCAGAGACGGAGTGGCCAGCGCCTATCAAACAGTCCGAGAGGGCTTCGCGGAGACAGCGGCGACGGTGAGTCTGGCGGCGCGCGAGTCTAGCGGCGTGGGCGTGCTGCGCATGCTGCCCGGCGCCGCGGTGTCGCCGCTGCTGCTGGCGGCCGCGGGCGCCGCCGACCTGCTGGGCGGGGTGCGCGCCACGCTGGCGCCGCACGAGCGGGGACACTGCGCCGACAAGTGGCGCCGCCACCCTACTCCGGGCTAA

Protein

MACNAMHAIDRQHVIDIQDEKRGGEHRTLWNASVNDHRIRTGTVYNDRDVPPIQKASDPLAETLGDSVRWVLTSPGINPCRVCGPLKVCSIPTGIVIPGSAATPNEHLRGENKQFHPLEHYVFKTVRTDVRIGRGKAEPSPWVKSGGDGSNTDDEYCFVETQPSSQDNDLDEPVVNWIGSGPAYMFDNHFSVPAARTDVLKAPKSFPLPMLRYTLCEMSITWNMYGGNDFRNPADAVSSKKTVTIDDNRKLGSPTSVKRSKDYEPYESGRAIAAAYRSGGVGWAAGADRVRTNTRASVKRRELRTRGGPQRDHKTKVKLCLTKVKFQYEVYPSGGMHASRQTLAISKIEVLDQLECSDINKLLSQYKLKDEPERKNAHMLVVKAVHLRPDPALTAQECCLKISLLPLWFNLDQDTLGFLMGYFSKLGSDECSGEDDSKSVGGLSTDSSGSRQTTPTHRPPVMTIASHLKDPPPTPTSLGDADALSLNETVLRDEEPLMETYEAERLVSENLIQLEEDFNKLGIDQGKPAAKLPVDAEPVDDSPIYFRRVVFSPEVPIRLDYVGKRVDLSSGPVAGLLMGLGQLNCSELTLKRLDYKLGLLGTEKLVQWALHEWLSDIKRHQLPGLLSGIGPMHSLLQLITGIRDLVWLPVEQWRRDGRLVHGLRRGAASFTARTAVAALDITTRILHLIQATAETAFDMLTPGPTLQLQDAYNRRERRRRRRLDPSRHPTDIRDGVASAYQTVREGFAETAATVSLAARESSGVGVLRMLPGAAVSPLLLAAAGAADLLGGVRATLAPHERGHCADKWRRHPTPG

Uniprot

A0A1E1W624   A0A194PFZ7   A0A212ERB3   A0A2H1W423   A0A1Y1M7G5   A0A1Y1M2J6   + More
A0A139WEE2   A0A182GP91   D6WPD4   A0A182GHW3   A0A0L7R1L6   A0A182M5K2   A0A182L7L8   A0A182RID7   A0A2A3EQF2   A0A088A0E9   A0A182V062   A0A182W0F9   Q17EJ4   A0A182Y760   A0A1I8JVR9   A0A2J7PZ47   A0A182K4W6   Q7QBB6   A0A2C9GPY0   A0A182TCX7   A0A2J7PZ50   A0A336LYP4   A0A182FAT7   W5J3H3   A0A0T6B0W9   B0X651   A0A182PNM0   A0A182QX62   A0A2M3ZZJ7   A0A232EP42   A0A2M3ZZ30   A0A2M4B807   A0A0M8ZVG2   A0A1Q3FXZ6   A0A026W559   A0A182N5K0   A0A1Q3FY49   A0A182IY01   A0A3L8D4K5   A0A1Q3FUR3   A0A1Q3FUU4   A0A084VCJ1   E2BCN5   A0A1L8DVF7   A0A1L8DVE2   A0A154P2Q2   E2ATP3   A0A0A9Y0W2   A0A146KUZ5   N6TWZ4   U4UK95   A0A151JC29   A0A224XCK3   A0A1J1IRZ7   A0A151WUL5   A0A1B6D799   A0A151JWS4   A0A195BX82   A0A158NIS8   F4WDD5   A0A195C9X4   A0A0J7KWF9   E0VNF9   A0A2S2R827   A0A0P6E0Z5   A0A0P6F3J4   A0A0L0C4Y2   A0A164TG66   A0A293N6S4   A0A1B0CUM3   A0A0P6IFL7   A0A0P5SPR2   A0A0P6I755   A0A0P6B2Q7   A0A0P5XG31   T1PF62   A0A1I8MR16   A0A1I8PZM8   A0A3R7SNZ9   J9KAE7   A0A226DD79   A0A2H8TGD4   A0A3P4RNI1  

Pubmed

26354079    22118469    28004739    18362917    19820115    26483478    + More
20966253    17510324    25244985    12364791    14747013    17210077    20920257    23761445    28648823    24508170    30249741    24438588    20798317    25401762    26823975    23537049    21347285    21719571    20566863    26108605    25315136   

EMBL

GDQN01008634    JAT82420.1    KQ459604    KPI92217.1    AGBW02013098    OWR43991.1    + More
ODYU01006127    SOQ47706.1    GEZM01043182    JAV79247.1    GEZM01043181    JAV79248.1    KQ971354    KYB26227.1    JXUM01078091    KQ563044    KXJ74581.1    EFA07398.2    JXUM01064717    KQ562311    KXJ76186.1    KQ414667    KOC64737.1    AXCM01002419    KZ288194    PBC33937.1    CH477282    EAT44885.1    NEVH01020340    PNF21609.1    AAAB01008880    EAA08640.5    APCN01002595    APCN01002596    PNF21608.1    UFQS01000189    UFQT01000189    SSX00997.1    SSX21377.1    ADMH02002196    ETN57873.1    LJIG01016265    KRT81120.1    DS232402    EDS41201.1    AXCN02001163    GGFK01000646    MBW33967.1    NNAY01003012    OXU20123.1    GGFK01000493    MBW33814.1    GGFJ01000043    MBW49184.1    KQ435863    KOX70359.1    GFDL01002607    JAV32438.1    KK107405    EZA51215.1    GFDL01002599    JAV32446.1    QOIP01000014    RLU14943.1    GFDL01003706    JAV31339.1    GFDL01003708    JAV31337.1    ATLV01010765    KE524612    KFB35685.1    GL447336    EFN86545.1    GFDF01003674    JAV10410.1    GFDF01003673    JAV10411.1    KQ434809    KZC06215.1    GL442637    EFN63197.1    GBHO01018318    JAG25286.1    GDHC01019672    JAP98956.1    APGK01057870    KB741282    ENN70837.1    KB632233    ERL90415.1    KQ979079    KYN22683.1    GFTR01008928    JAW07498.1    CVRI01000059    CRL03003.1    KQ982730    KYQ51543.1    GEDC01015740    JAS21558.1    KQ981667    KYN38464.1    KQ976394    KYM93249.1    ADTU01017115    ADTU01017116    GL888087    EGI67715.1    KQ978068    KYM97612.1    LBMM01002400    KMQ94872.1    DS235339    EEB14915.1    GGMS01016983    MBY86186.1    GDIQ01081173    JAN13564.1    GDIQ01068336    JAN26401.1    JRES01000902    KNC27438.1    LRGB01001800    KZS10430.1    GFWV01023164    MAA47891.1    AJWK01029397    AJWK01029398    AJWK01029399    GDIQ01005267    JAN89470.1    GDIQ01101218    JAL50508.1    GDIQ01034443    JAN60294.1    GDIP01020857    JAM82858.1    GDIP01073634    JAM30081.1    KA646800    AFP61429.1    QCYY01002618    ROT68945.1    ABLF02012006    LNIX01000025    OXA42667.1    GFXV01001381    MBW13186.1    CYRY02042655    VCX36440.1   

Proteomes

UP000053268    UP000007151    UP000007266    UP000069940    UP000249989    UP000053825    + More
UP000075883    UP000075882    UP000075900    UP000242457    UP000005203    UP000075903    UP000075920    UP000008820    UP000076408    UP000076407    UP000235965    UP000075881    UP000007062    UP000075840    UP000075902    UP000069272    UP000000673    UP000002320    UP000075885    UP000075886    UP000215335    UP000053105    UP000053097    UP000075884    UP000075880    UP000279307    UP000030765    UP000008237    UP000076502    UP000000311    UP000019118    UP000030742    UP000078492    UP000183832    UP000075809    UP000078541    UP000078540    UP000005205    UP000007755    UP000078542    UP000036403    UP000009046    UP000037069    UP000076858    UP000092461    UP000095301    UP000095300    UP000283509    UP000007819    UP000198287   

Pfam

PF09333   ATG_C        + More
PF12624   Chorein_N
PF16909   VPS13_C
PF13329   ATG2_CAD

Interpro

IPR026849   ATG2        + More
IPR015412   Autophagy-rel_C       
IPR026854   VPS13_N       
IPR026885   ATG2_CAD_motif       
IPR031645   VPS13_C       

ProteinModelPortal

A0A1E1W624   A0A194PFZ7   A0A212ERB3   A0A2H1W423   A0A1Y1M7G5   A0A1Y1M2J6   + More
A0A139WEE2   A0A182GP91   D6WPD4   A0A182GHW3   A0A0L7R1L6   A0A182M5K2   A0A182L7L8   A0A182RID7   A0A2A3EQF2   A0A088A0E9   A0A182V062   A0A182W0F9   Q17EJ4   A0A182Y760   A0A1I8JVR9   A0A2J7PZ47   A0A182K4W6   Q7QBB6   A0A2C9GPY0   A0A182TCX7   A0A2J7PZ50   A0A336LYP4   A0A182FAT7   W5J3H3   A0A0T6B0W9   B0X651   A0A182PNM0   A0A182QX62   A0A2M3ZZJ7   A0A232EP42   A0A2M3ZZ30   A0A2M4B807   A0A0M8ZVG2   A0A1Q3FXZ6   A0A026W559   A0A182N5K0   A0A1Q3FY49   A0A182IY01   A0A3L8D4K5   A0A1Q3FUR3   A0A1Q3FUU4   A0A084VCJ1   E2BCN5   A0A1L8DVF7   A0A1L8DVE2   A0A154P2Q2   E2ATP3   A0A0A9Y0W2   A0A146KUZ5   N6TWZ4   U4UK95   A0A151JC29   A0A224XCK3   A0A1J1IRZ7   A0A151WUL5   A0A1B6D799   A0A151JWS4   A0A195BX82   A0A158NIS8   F4WDD5   A0A195C9X4   A0A0J7KWF9   E0VNF9   A0A2S2R827   A0A0P6E0Z5   A0A0P6F3J4   A0A0L0C4Y2   A0A164TG66   A0A293N6S4   A0A1B0CUM3   A0A0P6IFL7   A0A0P5SPR2   A0A0P6I755   A0A0P6B2Q7   A0A0P5XG31   T1PF62   A0A1I8MR16   A0A1I8PZM8   A0A3R7SNZ9   J9KAE7   A0A226DD79   A0A2H8TGD4   A0A3P4RNI1  

KEGG

101738071    K17906 autophagy-related protein 2 | (RefSeq) autophagy-related protein 2 homolog A-like

PATHWAY

04136    Autophagy - other - Bombyx mori (domestic silkworm)
04140    Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0006914   GO:0000422   GO:0000045   GO:0019898   GO:0000407  

PANTHER

PTHR13190  

Length:

815

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.20653

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00043

outside

1  -  815

 

 

Pi

245.46305

Theta

165.13826

Tajima's D

3.275386

CLR

0.347525

CSRT

0.989050547472626

Interpretation

Uncertain