Gene

KWMTBOMO15087

Pre Gene Modal

BGIBMGA004832

Annotation

PREDICTED:_autophagy-related_protein_2_homolog_A-like_[Bombyx_mori]

Location

Bomo_Chr25(+):4645797-4671984      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.073

CDS

ATGTTGTGGTACTTACCATGGTCTGAAAGCATTAAGAAGAGAGCCTGTAGATATCTTTTACAGCGTTATTTGGGTAATTTTCTTGAACAGAAACTTACTTTAGATCAGCTGAGCGTCGATTTATACAATGGTACTGGGACAGTGTGCGATGTTAGCCTTGATTGTCAGGCTCTCAATGAATTAGGGGACTCACAAAACTGGCCATTACAAATAGTTGATGGTTATATGCAAGAGATCACTGTCACAATCCCGTGGTCGACTCTGCTAAAAGATGACTCTATTGTTGAAGTTAATGGTCTCTCAGTCACAGTTCAACCCAAAGTGCGGGCTGAGCCAGCATCATCAATGTTGGAATCAATGTGGTCTTCAATGTCATCGTCCATGCAGCTAGCTGCAGAGTGCCTCCGTGACGAAGATGGCCCTCAAGAAACACATGCTGTTGAAGGAATTGAAATGTTTGCACACGCTATTGATTCAATTCTGAGCAGGGTGAAAGTGAAATTCATAAATACAAAAATAAGGATAGAGCATGTACCCAAGAATGGCAACAGAGGAATAGCACTAGAGATTCACGTAAAGAATATCAATTATTTCGACGAAGCTGGTGCTGAACCAGCCCCTGATGTGACAAATCCAGAAAAGACTAAGACATACATCGTAGCTACTTACACCAATAAAAAAATCAAGTTTGACGGTGTGGCTCTCTATACTGATGAGTTTCCATCGAAATTGAGAACTATGTCGCGGAGCCTTATCATGGAAAAGTCTGTTTCTTCTCAACCAGATAAGACTGAACATAATCCATTTGAAACAACAGACATAAATTGTCAGAGTATGGCTTCGGATGTCTTCTATGAAACAAGGAGTGTTTTGTCCACGATAGAGCCAGAACTAGCAGGAGAAACTGTAACAACGTCAAGGAATAGCACGAGTACATCAGAATTGTCACCGGATGACAAAATTAATCAGCCCGATCCAATCCTTCTTGCAAAGATAACTGGACAACAAGAGTTGTCGATGAAGATAAAGCATACAGATGAAGTGGAGGGCCCCAAAATTGAAATTAGAGTGTTGCTAGGATCACTGGTGGCTTTCGTGTCTCCAAGGCAGCTCCACACCATAACTGAGCTGATTGACGCATTGAATCAACCACATCTAGAAGATACAAGCAACATACCGATGCGTTCAAACAGTGTAAACATGCAATGCAAACCGATGCGACCGGTGGATTTCCAGCTAATAGAGGCTCAGCTGTTGGGTAACTTTGAAAGGCAATACTCAAAACCATCGAACATGTACGGATGGTCCGGTCCTAATTATGAAGAGAACGAGTCAGAAAACGAAAAGTTTCTTCCGATGACGTCAGCCGGCAACCAGTTGAGCGAGAGCTTCTCGTCTACAGCCAGCTCGATGAGCGCCAGTATATCTTCGAGCGTGAACCTGCCGACCATGCAGCCTCGGATCAAGAGAAACAAAAAGGTTCCGCATATCGATGGCGATCCAACAGCCGAAGTGTCGCACGTCAGTCTGAGACTCTCATCGGTATCCTGCGTTCTCTTACACAAGGATATTCTGGTCTCCACATCCAGCGGCTCTGATTGCATTTCCCCGAGCAGCGCTAAGAAAATGCAAGAAGCGAGCGAGAGCTTTTTCGAAGATCTACAACCCTCACCGGCGCACGACAGCGACGTATTCGATTCAATAAACAAAGCTATAGATAAAGCTACCGAGAGAAATCATTTGAGGTTGCTGTCGTCTGAAATAACTCTGGACGGGAGCGAGAAGGTGACGTCACACGGCAGCCAGACCGTCTGCGAGGCGGCTGTCAGACATCTCCTGGTGAGAGAGCGTCTGCATCATCCGTGCACGGACAGCGACGACGGCAAACCCAAAAGCTACGACTTAGTGCGCTTTGAAAATAAAGAAGACTGCGATGGCTCAAGTCAAAGAAGTACAGCAAACTCGCTTGCCAACATCAGAATTAATTACAAGCAAACATCCAAATATGTCAAAATATCCGGAGAAAACAAAGTCGTTTATCCTACCACTGATATTGTAGTCAAATGCACACCGTTTTATATAGATGTCGACTTGACGGTGATCGATAGAATGTCAGCAACGTTCTTTGGCGGGTCAGCTTCCGTTCCAAACGCTCCGGCCGCGCCCCCACCCTCACAGAACCAACTGAACCTGACACTCCAATGTCCTGATCTCAGCGCTATACTTAGGTTCCCGATAGCGGATCTCCGTGCTGGTATCGACCACGAGACTCGTCGGGTGCGACCCGACTACCTCACGTTCAACTTCCAGAACGCCACGATAAGCTCCAGCCAATCGCCGAGCATACGACCCCAGCCGACGACAATGACAGTGAAATCCACGTGTTTGGATGTGTACTATCATGAAAATGACATTTTGCCGGCAACACACATAGCACGTGCCACGATCGACAACAATCCATTTGAAAGCGACATTTTGAGAGGGCACGCCGCAACTGCACCTTTACCAACAATCTCATTGACATTCAAACCTCGGAGCCCTAGTAAGGGTCCGTTTGACTCCCTCACGGACGAGAGCTCCTTCGAACCTGCCGCGAATACAATGACAACGTCAATGTACATCATGAACAACTTGCACAACTCATCGCCGAGCCCGTTCAGCGGAAAGAAAACCGCTCATCAGAGCGTTACTAAGCACGAGGGCGGACCTCAGCAAGATCAAGAAGAAGAACTAATAGTTCCAGGCAACGACGAAGAAATGTCCGAATTCACAACGAATTCAATAGATTTATCTTTGATACACCTCGAATTCGATCTGCCTATATTGAGTTTGCAGTTAGAATCGAAACAGCTATACGAGATAATCTACAATCGTATTAATTCCGATTTATTGCTGTGGGAGCCCCACGTGACTAGCGAAGAGGAATTCAACAAGCTTGCATGCGGTCCTATAAATCCAGCCTTCGGTACCTGTAAGGGAAGCGGTTACGATTCCGATTCGAATAGCACGTCATCGGAGGAAGAGCACAACTTGTACTACTCAACGTACGATAATAGATTCAAGAAAGGCTTAACTAACAATAAATCGGAGTACGAAACCAGAGACACGCACAACTTCTGTTTGACCTTCAAAGTCGGCAAAGGGTTGCTCACGATCTATTCTCCAGTTAGGGACAGCAACAAACGCGTGGTTCCAGGTCAAATGGGCGAATTGGTACTCGAAGCTCACAACCTATCGATGTGCCACGTCAGCGGTCTGAAGGGCAGACCGAAGACCGCTCAACTGTGTCTCAGAGCCCAGAAGACTACGCTTTATCATGAATCACTCATAACTATACCATCGGGGAAGCCGCCATTACGACTCTATGGCACAGTGTTGCCATCACATCTGAAACCTACTATTTACCCGTCAAGCAGAGGAGTTATAATAAAGGAACGATTGCAAAGAAAAGACATGTTCACAATGGCTTTGAAGGTGGACCCGGATTCTGAAACTCCCAATCTCAAGACAATCTGCATAGCTCTGGGCATAGAGCAAGCGACGCTGCGTTACAGAGGCGACAAAGGAATCTCCTGGCTGACCCAACTGATGGACGTGCTCGACGTATTGGACTTTCCCGTCCCGGGATACGCCCCGTCCACTGTGCTCTCGGAACTGCACGTGCACGTCGTCGACTGCGCCATCGATTACAGACCACTCTACCTTCCGATCAGAACGGTGGTAACGCTGGGAAACTTCAGCGTATCGAGTAACCTGATAGCCGCGACAAACACATCGTGCCTTCGCTTTCTAGCACAGGAGTGTACGCTATTTCTGTCCTACTTGCACAACACTAAACCGAACACGACCGTGCCTCAAGACGACGATAAACAGCCAGATGTTAATAAAGACTACATTTGCGTGATCGATGTTGGAATATTCGAGCTCTCTTTGAGAATGGAGGACAAGACTAACAACCCAAACGATTACCCACAAGTGGATCTAAGCGCATCAAACAACATGGTGACAGTACACACTTGCTGGGACTCTGCTAGCGCCCTCTGTCGACTCCTTACGTACGTGGCCTCAGATGGAGACTCCCAGCCTCCGTATGATGCTTCTTCAAGGCACACCAGTATATGTTCTGATCATCCTTTGGAACCATTAGTTGGCTTGGAAAATAGACCAATAGAAGAAATACGAGAGCTGTCTCCGAGCGAGATACAGCAGGTTAATGATCTGATGGCTGAAGCAATGAAGGAGAGTCCAAACACAACGCTTGATGAAGATGATCTGAACAGTTCAACAGAGAAAGAAGGAGTAGAGATATTTTTCTTCCCGGACGAGTCTAATACCAGACGGAGACTGCCATCGGAGTCTATCGAGCCGGATGCGGAACCTAAATCGATTGAGTTCGACGAGGGCGGGCAAGAGATCCAGGAGAAGCCAACCAGTCAAGTGGCAAAGGATTTAGGGGACCCCACTGGATCTCCCAAAACCCCCCAAAAGTCCAGACGAAAAAAGCCCCTGCAAGGGCCCGTCTTTATTGGCAGCGAACAATCAGCTGAAAACAAAGGTACAGTCGCGTCCATTATGATTTACGTTCAAATACCGGGACTCGAAACCATCCATAATGATGTGAAATATAAGTTCATAACATAA

Protein

MLWYLPWSESIKKRACRYLLQRYLGNFLEQKLTLDQLSVDLYNGTGTVCDVSLDCQALNELGDSQNWPLQIVDGYMQEITVTIPWSTLLKDDSIVEVNGLSVTVQPKVRAEPASSMLESMWSSMSSSMQLAAECLRDEDGPQETHAVEGIEMFAHAIDSILSRVKVKFINTKIRIEHVPKNGNRGIALEIHVKNINYFDEAGAEPAPDVTNPEKTKTYIVATYTNKKIKFDGVALYTDEFPSKLRTMSRSLIMEKSVSSQPDKTEHNPFETTDINCQSMASDVFYETRSVLSTIEPELAGETVTTSRNSTSTSELSPDDKINQPDPILLAKITGQQELSMKIKHTDEVEGPKIEIRVLLGSLVAFVSPRQLHTITELIDALNQPHLEDTSNIPMRSNSVNMQCKPMRPVDFQLIEAQLLGNFERQYSKPSNMYGWSGPNYEENESENEKFLPMTSAGNQLSESFSSTASSMSASISSSVNLPTMQPRIKRNKKVPHIDGDPTAEVSHVSLRLSSVSCVLLHKDILVSTSSGSDCISPSSAKKMQEASESFFEDLQPSPAHDSDVFDSINKAIDKATERNHLRLLSSEITLDGSEKVTSHGSQTVCEAAVRHLLVRERLHHPCTDSDDGKPKSYDLVRFENKEDCDGSSQRSTANSLANIRINYKQTSKYVKISGENKVVYPTTDIVVKCTPFYIDVDLTVIDRMSATFFGGSASVPNAPAAPPPSQNQLNLTLQCPDLSAILRFPIADLRAGIDHETRRVRPDYLTFNFQNATISSSQSPSIRPQPTTMTVKSTCLDVYYHENDILPATHIARATIDNNPFESDILRGHAATAPLPTISLTFKPRSPSKGPFDSLTDESSFEPAANTMTTSMYIMNNLHNSSPSPFSGKKTAHQSVTKHEGGPQQDQEEELIVPGNDEEMSEFTTNSIDLSLIHLEFDLPILSLQLESKQLYEIIYNRINSDLLLWEPHVTSEEEFNKLACGPINPAFGTCKGSGYDSDSNSTSSEEEHNLYYSTYDNRFKKGLTNNKSEYETRDTHNFCLTFKVGKGLLTIYSPVRDSNKRVVPGQMGELVLEAHNLSMCHVSGLKGRPKTAQLCLRAQKTTLYHESLITIPSGKPPLRLYGTVLPSHLKPTIYPSSRGVIIKERLQRKDMFTMALKVDPDSETPNLKTICIALGIEQATLRYRGDKGISWLTQLMDVLDVLDFPVPGYAPSTVLSELHVHVVDCAIDYRPLYLPIRTVVTLGNFSVSSNLIAATNTSCLRFLAQECTLFLSYLHNTKPNTTVPQDDDKQPDVNKDYICVIDVGIFELSLRMEDKTNNPNDYPQVDLSASNNMVTVHTCWDSASALCRLLTYVASDGDSQPPYDASSRHTSICSDHPLEPLVGLENRPIEEIRELSPSEIQQVNDLMAEAMKESPNTTLDEDDLNSSTEKEGVEIFFFPDESNTRRRLPSESIEPDAEPKSIEFDEGGQEIQEKPTSQVAKDLGDPTGSPKTPQKSRRKKPLQGPVFIGSEQSAENKGTVASIMIYVQIPGLETIHNDVKYKFIT

Uniprot

A0A2A4JD61   A0A1E1WTS8   A0A2H1W423   A0A194PFZ7   A0A194RLT3   A0A067QYI2   + More
A0A1Y1M2J6   A0A2J7PZ47   A0A2J7PZ50   A0A232EP42   A0A154P2Q2   A0A0M8ZVG2   A0A151JWS4   F4WDD5   A0A195C9X4   A0A2A3EQF2   A0A158NIS8   A0A3L8D4K5   E2BCN5   A0A0L7R1L6   A0A0J7KWF9   D6WPD4   A0A1B6D799   E0VNF9   A0A1Q3FUR3   A0A336LYP4   A0A1Y1M5S1   U4UK95   N6TWZ4   A0A2R5LMY0   A0A151WUL5   A0A1Q3FUY0   A0A195BX82   A0A151JC29   A0A0P6B2Q7   A0A026W559   A0A088A0E9   A0A2R7X1T3   T1JN27   A0A2S2R827   A0A2H8TGD4   J9KAE7   V3ZKL3   A0A0A9Y0W2   A0A146KUZ5   A0A1Q3FY02   A0A1Q3FY49   E9G5X5   A0A0P5HTJ2   A0A0P5DKB4   A0A0P5YWT0   A0A0P5ZXR6   A0A0P6E1E0   A0A0P5XG31   A0A0P6D5P3   A0A182K4W6   A0A2M3ZZJ7   A0A2M3ZZ30   A0A1I8JVR9   A0A2C9GPY0   Q7QBB6   A0A0P5P9B3   A0A182V062   A0A182TCX7   V9KAN2  

Pubmed

26354079    24845553    28004739    28648823    21719571    21347285    + More
30249741    20798317    18362917    19820115    20566863    23537049    24508170    23254933    25401762    26823975    21292972    12364791    14747013    17210077    24402279   

EMBL

NWSH01002042    PCG69333.1    GDQN01000843    JAT90211.1    ODYU01006127    SOQ47706.1    + More
KQ459604    KPI92217.1    KQ460045    KPJ18275.1    KK852874    KDR14543.1    GEZM01043181    JAV79248.1    NEVH01020340    PNF21609.1    PNF21608.1    NNAY01003012    OXU20123.1    KQ434809    KZC06215.1    KQ435863    KOX70359.1    KQ981667    KYN38464.1    GL888087    EGI67715.1    KQ978068    KYM97612.1    KZ288194    PBC33937.1    ADTU01017115    ADTU01017116    QOIP01000014    RLU14943.1    GL447336    EFN86545.1    KQ414667    KOC64737.1    LBMM01002400    KMQ94872.1    KQ971354    EFA07398.2    GEDC01015740    JAS21558.1    DS235339    EEB14915.1    GFDL01003706    JAV31339.1    UFQS01000189    UFQT01000189    SSX00997.1    SSX21377.1    GEZM01043182    JAV79246.1    KB632233    ERL90415.1    APGK01057870    KB741282    ENN70837.1    GGLE01006735    MBY10861.1    KQ982730    KYQ51543.1    GFDL01003707    JAV31338.1    KQ976394    KYM93249.1    KQ979079    KYN22683.1    GDIP01020857    JAM82858.1    KK107405    EZA51215.1    KK856437    PTY25752.1    AFFK01020674    GGMS01016983    MBY86186.1    GFXV01001381    MBW13186.1    ABLF02012006    KB203827    ESO82945.1    GBHO01018318    JAG25286.1    GDHC01019672    JAP98956.1    GFDL01002601    JAV32444.1    GFDL01002599    JAV32446.1    GL732533    EFX85094.1    GDIQ01222975    JAK28750.1    GDIP01155015    JAJ68387.1    GDIP01052230    JAM51485.1    GDIP01037187    JAM66528.1    GDIQ01084173    JAN10564.1    GDIP01073634    JAM30081.1    GDIQ01090571    JAN04166.1    GGFK01000646    MBW33967.1    GGFK01000493    MBW33814.1    APCN01002595    APCN01002596    AAAB01008880    EAA08640.5    GDIQ01131862    JAL19864.1    JW862188    AFO94705.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000027135    UP000235965    UP000215335    + More
UP000076502    UP000053105    UP000078541    UP000007755    UP000078542    UP000242457    UP000005205    UP000279307    UP000008237    UP000053825    UP000036403    UP000007266    UP000009046    UP000030742    UP000019118    UP000075809    UP000078540    UP000078492    UP000053097    UP000005203    UP000007819    UP000030746    UP000000305    UP000075881    UP000076407    UP000075840    UP000007062    UP000075903    UP000075902   

Pfam

PF12624   Chorein_N        + More
PF09333   ATG_C
PF16909   VPS13_C
PF13329   ATG2_CAD

Interpro

IPR026849   ATG2        + More
IPR026854   VPS13_N       
IPR015412   Autophagy-rel_C       
IPR026885   ATG2_CAD_motif       
IPR031645   VPS13_C       

ProteinModelPortal

A0A2A4JD61   A0A1E1WTS8   A0A2H1W423   A0A194PFZ7   A0A194RLT3   A0A067QYI2   + More
A0A1Y1M2J6   A0A2J7PZ47   A0A2J7PZ50   A0A232EP42   A0A154P2Q2   A0A0M8ZVG2   A0A151JWS4   F4WDD5   A0A195C9X4   A0A2A3EQF2   A0A158NIS8   A0A3L8D4K5   E2BCN5   A0A0L7R1L6   A0A0J7KWF9   D6WPD4   A0A1B6D799   E0VNF9   A0A1Q3FUR3   A0A336LYP4   A0A1Y1M5S1   U4UK95   N6TWZ4   A0A2R5LMY0   A0A151WUL5   A0A1Q3FUY0   A0A195BX82   A0A151JC29   A0A0P6B2Q7   A0A026W559   A0A088A0E9   A0A2R7X1T3   T1JN27   A0A2S2R827   A0A2H8TGD4   J9KAE7   V3ZKL3   A0A0A9Y0W2   A0A146KUZ5   A0A1Q3FY02   A0A1Q3FY49   E9G5X5   A0A0P5HTJ2   A0A0P5DKB4   A0A0P5YWT0   A0A0P5ZXR6   A0A0P6E1E0   A0A0P5XG31   A0A0P6D5P3   A0A182K4W6   A0A2M3ZZJ7   A0A2M3ZZ30   A0A1I8JVR9   A0A2C9GPY0   Q7QBB6   A0A0P5P9B3   A0A182V062   A0A182TCX7   V9KAN2  

PDB

6CBC     E-value=0.00671751,     Score=99

KEGG

101738071    K17906 autophagy-related protein 2 | (RefSeq) autophagy-related protein 2 homolog A-like

GO

GO:0006914   GO:0000422   GO:0000045   GO:0019898   GO:0000407   GO:0016021  

PANTHER

PTHR13190  

Length:

1546

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00959999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1  -  1546

 

 

Pi

228.347133

Theta

163.599626

Tajima's D

1.448092

CLR

0.133115

CSRT

0.775261236938153

Interpretation

Uncertain