Gene
KWMTBOMO15085
Pre Gene Modal
BGIBMGA004830
Annotation
PREDICTED:_5-hydroxytryptamine_receptor_1A-alpha-like_[Plutella_xylostella]
Location in the cell
PlasmaMembrane Reliability : 4.858
Sequence
CDS
ATGTCGGACTATTTTAATATGAGTGCGAGTAAAATGAGTGAAGGCCCAGAAATTCAATTGTTCAAGGATACGGGGAAAGAACAATTATTGAAATATCAACTTATTGCTTACATACTCGGAACATTGATTGTTTTAAGCAATCTTGTCGTTGTTGTATCGAGCGGATTGATACTAAAAAAAGGTCAGAAACCAAAGAGCACGTACCTTCTGCTGGGCAATGTCTCGCTTGCCGACACAATTGTCGGCTTTTCCCTTATATTCGGAATGTCTATGGAGAACACCATAAGTTCTAATGTACTATGCATCTTTCAAATTGGTATGCTTGCTTGCCCTGTGATGGTGTCACTATTCAGTGTTGGTCTAATAGCTGTCGATCGCTATATCTACATTCTGCACGGCTTGTACTACGGAAGATGGTTCAATACAAAAAGAGTAAGAATCGGTATACTCTGCACGTGGATTATTAGTCTCACTTTGGGATTCTTGCCTGCGACCGGCTGGAAAAACGAGGAGCTTTTGTATACAAGGTGTTATTATGTGGCACTGTTTCCTGGTATCTTAGTGTTGCTGAACTCTGTCCTTAGCATCATTCCAATTATTGTTGTGGCAGTGCTGTACTCTATTATACTGTTTAGAGCTTTGAAGAACGTGAAGAATCTTAAGGCCGCGAAAAATGATGAAAAACCAAAATTAGAAACACCTAAGCTAAGAATGTATCGTGGAACCGTTAACGAGAATAAAGTAAAAACACAGTTCTGTAGGAGTTCAACTAGTGTAAGCGATATTAGCGTTCACAGGAGTTCTTCGTTTCATTTAAGTCGAACGAATCAAACTCCAAAGTCGAGAATTAAAATATCTACAAAATCCAAAAGCATCGATGATCTCACAAGTGACAATGCAAACATTCTACACGACTACCGTGACAGTAAAAATAATGATGGCCGAACGCACGAATCTGGACACGAATCCAAGTTCAGTGTTTACACTGTAGAATCGAATCTTTCTGATAGAAACTCATCGCTTGCTGACGCAAATAATACATCGGATTTGGAGATCAATGTAAACAACAGATCTAATAGTAATGTTAAATCGAAAGAACCAAACAAATGGAGGGCTATAACCGTTGTAATGTTAACATCCGGAAGTTTTATAGTAACGTGGCTTCCTTTCTTCGTGGCCGTAATATTATTTGTGTTCTGTGAAGACAAGCTGAAGAATCAAAAATGTATTGAATTACGACGTTTGATTGAAGGCCCTCTGGCTACTTTAGCATTTGTTAACAGTATTCTGAATCCACTGATATACGCTTGGTGGCATAAAGGATTCCAGAGGTCGGTGCGTGCATACTACCATAAATATGTACACAAATTCACGTGCTATTTCGGTAGATGA
Protein
MSDYFNMSASKMSEGPEIQLFKDTGKEQLLKYQLIAYILGTLIVLSNLVVVVSSGLILKKGQKPKSTYLLLGNVSLADTIVGFSLIFGMSMENTISSNVLCIFQIGMLACPVMVSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPATGWKNEELLYTRCYYVALFPGILVLLNSVLSIIPIIVVAVLYSIILFRALKNVKNLKAAKNDEKPKLETPKLRMYRGTVNENKVKTQFCRSSTSVSDISVHRSSSFHLSRTNQTPKSRIKISTKSKSIDDLTSDNANILHDYRDSKNNDGRTHESGHESKFSVYTVESNLSDRNSSLADANNTSDLEINVNNRSNSNVKSKEPNKWRAITVVMLTSGSFIVTWLPFFVAVILFVFCEDKLKNQKCIELRRLIEGPLATLAFVNSILNPLIYAWWHKGFQRSVRAYYHKYVHKFTCYFGR
Summary
Similarity
Belongs to the G-protein coupled receptor 1 family.
Uniprot
EMBL
Proteomes
Interpro
ProteinModelPortal
PDB
5N2S
E-value=1.34205e-06,
Score=126
Ontologies
GO
Topology
Length:
463
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
162.13763
Exp number, first 60 AAs:
22.93883
Total prob of N-in:
0.00059
POSSIBLE N-term signal
sequence
outside
1 - 33
TMhelix
34 - 56
inside
57 - 67
TMhelix
68 - 87
outside
88 - 101
TMhelix
102 - 124
inside
125 - 144
TMhelix
145 - 167
outside
168 - 186
TMhelix
187 - 209
inside
210 - 377
TMhelix
378 - 400
outside
401 - 414
TMhelix
415 - 437
inside
438 - 463
Population Genetic Test Statistics
Pi
244.632659
Theta
166.998606
Tajima's D
1.783265
CLR
0.210703
CSRT
0.844057797110145
Interpretation
Uncertain
