SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15079
Pre Gene Modal
BGIBMGA004841
Annotation
PREDICTED:_uncharacterized_protein_LOC101741141_isoform_X3_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.505
 

Sequence

CDS
ATGCGGCGCCTCCTCGTGACGCTGATAGCCATCGCCGCCGACATCTACGCTCAAGACTCGCCCAGGGAACATCAGGGACCACAGATTTGCGGGGGCCGGCTCCGAGGACCCACGGGCGTGATACAGACACCCAATTTCCCCAACCCGTTTCCCGTGCCGATAAAGTGCCGTTGGATTATCGAGCACGACATCGCGAACGGAACTATTTCGATATATTTCACTCAACAATACACGACTAGTGGATTAACCTTCACTGAATACATGTATTATGATGAATCGTATAAGCTGGGCGAGAGGCGGGCTCTAACTGTGACCGAGGACAGCATCACAAGAGTTAAATGGCTGCAGGTAAGCTTATGA
Protein
MRRLLVTLIAIAADIYAQDSPREHQGPQICGGRLRGPTGVIQTPNFPNPFPVPIKCRWIIEHDIANGTISIYFTQQYTTSGLTFTEYMYYDESYKLGERRALTVTEDSITRVKWLQVSL

Summary

EMBL
BABH01024992    JTDY01003498    KOB69464.1    KQ460045    KPJ18281.1    NWSH01000768    + More
PCG74316.1    ODYU01012650    SOQ59079.1    KQ459604    KPI92211.1    KZ150294    PZC71563.1    AJVK01004526    CCAG010019844    CCAG010019845    CCAG010019846    CCAG010019847    JRES01000523    KNC30439.1    JXUM01098114    KQ564395    KXJ72342.1    CH478189    EAT33619.1    CH477493    EAT40003.1    JXJN01003205    JXJN01003206    ATLV01023453    KE525343    KFB49211.1    AAAB01008980    EAA14277.3    APCN01001743    DS231929    EDS27184.1    AXCM01002313    CH479180    EDW28418.1    KQ435078    KZC14507.1    KK855299    PTY21894.1    CH379060    EAL33374.3    OUUW01000010    SPP85607.1    CH954177    EDV58455.2    CVRI01000036    CRK93033.1    AXCN02000691    KZ288215    PBC32638.1    CH902620    EDV32257.2    KPU73861.1    KPU73862.1    GL434853    EFN74454.1    GAMC01002030    JAC04526.1    ADMH02001647    ETN61560.1    CM000157    KRJ97992.1    ACPB03000346    KQ981820    KYN35213.1    CM000361    EDX04460.1    KQ981082    KYN09641.1    KQ977827    KYM99429.1    LBMM01002830    KMQ94307.1    KQ414735    KOC62238.1    GL449738    EFN82099.1    CH480818    EDW52358.1    KQ982254    KYQ58716.1    PYGN01000145    PSN52875.1    KQ976424    KYM88240.1    KQ971372    KYB25425.1    CH916368    EDW03145.1    GL887596    EGI70702.1    GECU01019893    JAS87813.1    CM002910    KMY89398.1    ADTU01027093    AE014134    AAF52856.4    AGB92849.1    CH933807    EDW12262.2    GL768055    EFZ12772.1    GEDC01018408    JAS18890.1    KQ435716    KOX79023.1    GBHO01043757    JAF99846.1    GDHC01010115    JAQ08514.1    QOIP01000006    RLU21863.1    CH964274    EDW85213.2    CH940654    EDW57812.2    KRF77960.1    KK855217    PTY21498.1    AAZX01000615    KK107020    EZA62539.1    ACPB03000334    ACPB03000335    DS235000    EEB10185.1    MWRG01017965    PRD23338.1    AMQN01004347    KB293301    ELU16131.1   
Pfam
PF00431   CUB        + More
PF00008   EGF
PF13895   Ig_2
Interpro
IPR035914   Sperma_CUB_dom_sf        + More
IPR000859   CUB_dom       
IPR036445   GPCR_2_extracell_dom_sf       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR036179   Ig-like_dom_sf       
IPR001879   GPCR_2_extracellular_dom       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR003598   Ig_sub2       
IPR000203   GPS       
IPR029064   L30e-like       
IPR001881   EGF-like_Ca-bd_dom       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR017975   Tubulin_CS       
SUPFAM
SSF49854   SSF49854        + More
SSF111418   SSF111418       
SSF48726   SSF48726       
PDB
6GJE     E-value=0.000413316,     Score=96

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.996788
 
 
Length:
119
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03529
Exp number, first 60 AAs:
0.00107
Total prob of N-in:
0.15353
outside
1  -  119
 
 

Population Genetic Test Statistics

Pi
75.282224
Theta
93.427933
Tajima's D
-0.630442
CLR
24.796442
CSRT
0.214489275536223
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号