Gene

KWMTBOMO15066  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004824

Annotation

electron-transfer-flavoprotein_beta_polypeptide_[Bombyx_mori]

Location

Bomo_Chr25(+):3915003-3917635      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.829

CDS

ATGTCTCGTGTTCTTGTTGGCGTTAAGAGAGTTATCGACTATGCTGTAAAAATTCGTGTGAAGCCAGACAAGTCTGGTGTAGTCACAGATGGGGTGAAGCACTCAATGAATCCTTTTGATGAGATAGCAGTAGAGGAGGCTGTTCGAATGAAAGAAAAAAAGTTAGCAAGCGAAGTCATTGCAGTCTCTTGTGGACCATCACAAGCACAGGAAACTCTCAGAACTGCTCTTGCGATGGGTGCAGATCGAGCTATTCATGTTGAAGTGGCTGGGGCTGAATATGACACATTACAGCCCATTCATGTTGCAAAAATCTTAGCAAAACTGTCACAAGATGAGAAGGCAGACTTAGTTATTGTTGGCAAACAGGCCATAGATGATGACTCCAACCAGACAGCACAGATGACTGCTGCTTTATTAGATTGGCCACAAGGAACATTTGCATCAAAGATAGAAAAGACTGATGGTGCTCTAACTATAACCCGTGAAATTGATGGAGGTTTAGAGGTTATCAAGACAAAAATCCCAGCTGTACTGAGTGCTGATCTGCGACTGAATGAACCACGATATGCTACACTGCCTAACATCATGAAAGCAAAGAAGAAGCCTCTCAAAAAAGTAAGTGCCAAAGACCTTGGGGTGGACCTGGCACCTCGTATCAAGGTGGTCTCTGTGGAAGATCCTCCAGTCCGACAGGCTGGCTCCATCATACCTGATGTCGACACTCTCGTTGCTAAGCTTAAGGAAGGCGGACATGTGTAA

Protein

MSRVLVGVKRVIDYAVKIRVKPDKSGVVTDGVKHSMNPFDEIAVEEAVRMKEKKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMKAKKKPLKKVSAKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV

Uniprot

Q2F6A1   A0A2A4JMV5   A0A212FLM7   A0A3S2NLH6   A0A194PM61   S4NJ39   + More
A0A2H1WV21   A0A0N1I7H4   A0A1B6F3Z7   A0A1B6EF91   A0A2J7QLI2   K7IR93   D6WSM6   W8CCA7   A0A195FPB7   A0A1Y1MB95   A0A0T6ASW5   A0A151WM30   E2AIR9   A0A0J7L4M3   A0A1A9VDP3   A0A182G5Z7   A0A026WVS2   A0A1W4WX89   F4WJ49   A0A023ENM9   B0W9P9   A0A0K8VV21   T1PHZ9   J3JYG8   N6U2K5   A0A034VPU8   A0A0C9R912   A0A1L8EHB8   A0A1A9ZSV8   D3TNF0   A0A0A1XT47   A0A1A9YQ62   A0A195BMF2   A0A1L8E115   A0A158NTV2   A0A1A9W5P6   E2B6H4   A0A151JR04   A0A1B0C9H6   A0A182ITB0   A0A067RME8   A0A1I8PJD8   A0A182Q436   B4PPJ8   B3P5C9   A0A182NN50   A0A0K8TSS5   A0A195CTV2   A0A0C9QL89   Q8MR58   B4R0S9   B4HZF2   Q0KHZ6   A0A1B0DM44   W5JJZ6   B3LWX6   A0A084W805   A0A0A9XI89   A0A0M5JCP3   A0A182PST4   Q297T4   A0A182LQ71   Q7Q501   A0A182I9E3   A0A182X4S9   A0A182V5E2   A0A182RE72   A0A182YEP7   A0A182TDY7   A0A182T8P6   B4KAN5   A0A1W4UC91   A0A2M3Z262   B4G306   A0A2M4A8G6   A0A3B0JF93   A0A0M8ZSX3   A0A182LW32   T1DNI8   A0A2M4BYC4   A0A0L0BYC8   A0A0P4VLG6   T1IBK0   A0A310SLQ8   A0A182VPX5   A0A182F8S1   R4FQ22   A0A0L7R2V3   A0A088A7F1   U4UD08   A0A2A3EAZ4   U4UF37   A0A069DRJ2   U5EYT1  

Pubmed

19121390    22118469    26354079    23622113    20075255    18362917    + More
19820115    24495485    28004739    20798317    26483478    24508170    30249741    21719571    24945155    25315136    22516182    23537049    25348373    20353571    25830018    21347285    24845553    17994087    17550304    26369729    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20920257    23761445    18057021    24438588    25401762    26823975    15632085    23185243    20966253    12364791    14747013    17210077    25244985    26108605    27129103    26334808   

EMBL

BABH01025030    DQ311171    ABD36116.1    NWSH01000949    PCG73405.1    AGBW02007763    + More
OWR54600.1    RSAL01000008    RVE53944.1    KQ459604    KPI92200.1    GAIX01013834    JAA78726.1    ODYU01011277    SOQ56915.1    KQ460594    KPJ13923.1    GECZ01025176    JAS44593.1    GEDC01000709    JAS36589.1    NEVH01013243    PNF29454.1    KQ971354    EFA05895.1    GAMC01004026    JAC02530.1    KQ981382    KYN42303.1    GEZM01035760    JAV83099.1    LJIG01022885    KRT78227.1    KQ982959    KYQ48755.1    GL439869    EFN66681.1    LBMM01000651    KMQ97887.1    JXUM01042943    JXUM01044222    KQ561391    KQ561344    KXJ78732.1    KXJ78884.1    KK107079    QOIP01000010    EZA60130.1    RLU17817.1    GL888181    EGI65819.1    GAPW01003569    JAC10029.1    DS231865    EDS40368.1    GDHF01009587    GDHF01003129    JAI42727.1    JAI49185.1    KA647508    AFP62137.1    BT128296    AEE63254.1    APGK01052246    KB741211    ENN72797.1    GAKP01013636    JAC45316.1    GBYB01004650    JAG74417.1    GFDG01000754    JAV18045.1    CCAG010010757    EZ422952    ADD19228.1    GBXI01000061    JAD14231.1    KQ976435    KYM87055.1    GFDF01001748    JAV12336.1    ADTU01026166    GL445973    EFN88718.1    KQ978615    KYN29828.1    AJWK01002349    KK852540    KDR21775.1    AXCN02002214    CM000160    EDW98248.1    CH954182    EDV53179.1    GDAI01000179    JAI17424.1    KQ977279    KYN04095.1    GBYB01001352    JAG71119.1    AY122112    AAM52624.1    CM000364    EDX14900.1    CH480819    EDW53409.1    AE014297    AAF56940.1    AAN14188.1    AJVK01016664    ADMH02001214    ETN63633.1    CH902617    EDV43815.1    KPU80482.1    ATLV01021336    KE525316    KFB46349.1    GBHO01025086    GBHO01025085    GBRD01007754    GDHC01014085    GDHC01001019    JAG18518.1    JAG18519.1    JAG58067.1    JAQ04544.1    JAQ17610.1    CP012526    ALC46918.1    CM000070    EAL28121.1    KRT00471.1    KRT00472.1    KRT00473.1    KRT00474.1    AAAB01008961    EAA11983.3    APCN01008266    CH933806    EDW16772.2    GGFM01001840    MBW22591.1    CH479179    EDW24201.1    GGFK01003773    MBW37094.1    OUUW01000005    SPP81054.1    KQ435866    KOX70297.1    AXCM01000327    GAMD01002830    JAA98760.1    GGFJ01008597    MBW57738.1    JRES01001160    KNC25043.1    GDKW01000639    JAI55956.1    ACPB03006483    KQ762343    OAD55932.1    GAHY01000629    JAA76881.1    KQ414664    KOC65207.1    KB632263    ERL90932.1    KZ288296    PBC28943.1    ERL90933.1    GBGD01002627    JAC86262.1    GANO01001831    JAB58040.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    + More
UP000235965    UP000002358    UP000007266    UP000078541    UP000075809    UP000000311    UP000036403    UP000078200    UP000069940    UP000249989    UP000053097    UP000279307    UP000192223    UP000007755    UP000002320    UP000095301    UP000019118    UP000092445    UP000092444    UP000092443    UP000078540    UP000005205    UP000091820    UP000008237    UP000078492    UP000092461    UP000075880    UP000027135    UP000095300    UP000075886    UP000002282    UP000008711    UP000075884    UP000078542    UP000000304    UP000001292    UP000000803    UP000092462    UP000000673    UP000007801    UP000030765    UP000092553    UP000075885    UP000001819    UP000075882    UP000007062    UP000075840    UP000076407    UP000075903    UP000075900    UP000076408    UP000075902    UP000075901    UP000009192    UP000192221    UP000008744    UP000268350    UP000053105    UP000075883    UP000037069    UP000015103    UP000075920    UP000069272    UP000053825    UP000005203    UP000030742    UP000242457   

PRIDE

Q2F6A1    Q8MR58    Q0KHZ6    A0A088A7F1   

Pfam

PF01012   ETF        + More
PF01399   PCI
PF10602   RPN7

Interpro

IPR014729   Rossmann-like_a/b/a_fold        + More
IPR014730   ETF_a/b_N       
IPR033948   ETF_beta_N       
IPR012255   ETF_b       
IPR000049   ET-Flavoprotein_bsu_CS       
IPR000717   PCI_dom       
IPR036390   WH_DNA-bd_sf       
IPR033008   CSN1       
IPR019585   Rpn7/CSN1       

SUPFAM

SSF46785   SSF46785       

Gene 3D

3.40.50.620    

CDD

cd01714  ETF_beta

ProteinModelPortal

Q2F6A1   A0A2A4JMV5   A0A212FLM7   A0A3S2NLH6   A0A194PM61   S4NJ39   + More
A0A2H1WV21   A0A0N1I7H4   A0A1B6F3Z7   A0A1B6EF91   A0A2J7QLI2   K7IR93   D6WSM6   W8CCA7   A0A195FPB7   A0A1Y1MB95   A0A0T6ASW5   A0A151WM30   E2AIR9   A0A0J7L4M3   A0A1A9VDP3   A0A182G5Z7   A0A026WVS2   A0A1W4WX89   F4WJ49   A0A023ENM9   B0W9P9   A0A0K8VV21   T1PHZ9   J3JYG8   N6U2K5   A0A034VPU8   A0A0C9R912   A0A1L8EHB8   A0A1A9ZSV8   D3TNF0   A0A0A1XT47   A0A1A9YQ62   A0A195BMF2   A0A1L8E115   A0A158NTV2   A0A1A9W5P6   E2B6H4   A0A151JR04   A0A1B0C9H6   A0A182ITB0   A0A067RME8   A0A1I8PJD8   A0A182Q436   B4PPJ8   B3P5C9   A0A182NN50   A0A0K8TSS5   A0A195CTV2   A0A0C9QL89   Q8MR58   B4R0S9   B4HZF2   Q0KHZ6   A0A1B0DM44   W5JJZ6   B3LWX6   A0A084W805   A0A0A9XI89   A0A0M5JCP3   A0A182PST4   Q297T4   A0A182LQ71   Q7Q501   A0A182I9E3   A0A182X4S9   A0A182V5E2   A0A182RE72   A0A182YEP7   A0A182TDY7   A0A182T8P6   B4KAN5   A0A1W4UC91   A0A2M3Z262   B4G306   A0A2M4A8G6   A0A3B0JF93   A0A0M8ZSX3   A0A182LW32   T1DNI8   A0A2M4BYC4   A0A0L0BYC8   A0A0P4VLG6   T1IBK0   A0A310SLQ8   A0A182VPX5   A0A182F8S1   R4FQ22   A0A0L7R2V3   A0A088A7F1   U4UD08   A0A2A3EAZ4   U4UF37   A0A069DRJ2   U5EYT1  

PDB

1T9G     E-value=1.58624e-84,     Score=794

KEGG

692811    K03521 electron transfer flavoprotein beta subunit | (RefSeq) electron-transfer-flavoprotein beta po

GO

GO:0009055   GO:0007406   GO:0006119   GO:0005739   GO:0017133   GO:0008180   GO:0000338   GO:0005524   GO:0003682   GO:0003677   GO:0003700   GO:0006355   GO:0008270   GO:0043565   GO:0005112   GO:0015930  

PANTHER

PTHR21294   PTHR14145:SF2  

Length:

253

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

6e-05

Total prob of N-in:

0.07313

outside

1  -  253

 

 

Pi

378.01387

Theta

233.358103

Tajima's D

1.952297

CLR

0.000517

CSRT

0.874906254687266

Interpretation

Uncertain