Gene

KWMTBOMO15065  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004823

Annotation

hypothetical_protein_KGM_00713_[Danaus_plexippus]

Location

Bomo_Chr25(+):3888523-3901852      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.54

CDS

ATGGATGGTCCACCAGGGACCGGATCTACGAATAACAATGCTTCGGTGGGGCCTCCACCGGGGATGCCAAACTTTCCTCCGATGCCGCCACCACCGGGATCTATGGGACCGCCACCGGGGTCCATTGGACCGCCACCAGGAACTATGGGACCGCCACCAGGAACTATGGGACCGCCACCAGGAACTATGGGACCACCACCAGGAACTATGGGACCGCCACCAGGAGCTATGGGACCGCCACCGGGATCCATGGGGCCTCCACCAATGGGTCCGCCTGGACCACCACCTGTTAGCTCGTCTGGTGGACCTCCAAACATGCCGCCGGGAATAGGTCCACCTCCACCAGGAATGATGCCTCCGGGAATGGGACCACCGCCAATGGGGCCGCCTGGAATGGGTCCACCTCCAATGGGCCCCCCGGGTATGGGACCTCCTGGTATGGGTCCACCCGGTATGGGACCTCCCGGAATGGGTCCTCCCGGAATGGGACCTCCAGGAATGGGTCCACCCCGAATGCCACCAAATATGATGCGTAATAAGAATAATTATAATAATCAAAATATGGACATGGGACCACCTGGGATGAGACCACCTATGGGACCATGGGATGGACCACCAGGCCCACCTGGTCCACCTGGCCCCCCTGGGCCTGGGTGGGGAATGCAAAGTGATGGTCCGCCAGGATGGAATGATCAAGATGATGATGATGAAGAAGAAGAAGAAGAAGATGGGGAAGAAGATTTATCCTCTGACCAACATTCTTCTCTGCCATCACTCTTGACCATGAAGATTGAAACACCAGAAGAATTTAAAAATAAACAGGGAAATGCTGGAGGTGTAGTACTCCCAAAGGCTCTGGAAGAAGCTCTTGCTTACAAAGACCAAAGACAAGCAGCTCTTGGTAGTGAAGAAGATAAAGAAACAGATGTGCAAAAAGACATGGAAGCACCGCCAGCTCCAGTGATCAGTACGGAGTATGACGTGGAAGAGGATGAACAGTCAGACGATGAAAACATTCCTGATCCACCGATGCCACCAGTAATTTCCAAACAAGAGTCCCAAGCTAGCAAATCCAATAAAAACAAAAGAAAGAAAAAGAAAAAGAAGCTGGCTAAACAGAAACGCAATGAAGAGTCTAAGACAAAGAACAACGCACAAGAAGAAAAGAGATCCAGTGACAAAGAAAATGAAAAAGAAGCAGATATTGAATACGTGCAAGAAAACATACAGTTTCATGAAATGGAACCAATGTACCGTCAGTTCCATCGGATACTGGAAGCATTTAAAATTTCGGAGAAAAAGGAAGAGACGATCAAAGATGAGGGTATGGATGCTCCAAAACCAACAAAACATCAGGATAAAGTGCAAGACCAGTTCGCAGCGGATGATGAGGCAGCTGAGAAAAACGCAGCCGACGAAAAGGAGCGCCTATCAAAACGCAAACTAAAAAAATTGTCGCGTTTGTCAGTGGCCGAACTGAAGCAGCTAGTGGCTCGACCCGACGTCGTGGAAATGTACGACGTGACCGCGCGGGATCCCAAACTACTTGTCCAGCTAAAGGCACACAGGAACACTGTCCAAGTACCCAGACATTGGTGTTACAAGAGGAAGTACTTGCAAGGAAAACGCGGTATAGAAAAACCTCCCTTCGATCTACCGGACTTTATAAAGAAGACAGGAATCATGGAAATGAGAGCATCGCTGCAGGACAAAGAAGAGACTAAAACCCTTAAAGCGAAGATGAGGGAACGTTCTAGACCGAAATTGGGCAAGATCGATATTGACTACCAGAAATTGCATGATGCCTTTTTCAAATGGCAAACAAAACCGCGTATGACAATCCACGGAGATCTGTACTACGAAGGCAAAGAGTTCGAGACTCGTCTGCGCGAGAAGAAGCCCGGAGATCTGTCCGAGGAACTGAGAACTGCTCTCGGTATGCCCGTCGGGCCCGGCTCACAGAAGGTACCACCGCCGTGGTTGATCGCGCAGCAGCGGTACGGGCCGCCGCCCTCGTACCCGAACCTCAAGATCCCCGGCCTCAACGCGCCCATACCCGAGGGGTGCGCCTTCGGCTACCACGCCGGGGGGTGGGGCAAACCGCCCGTCGACGAAATGGGAAAACCGCTCTACGGAGATGTCTTCGGACATCAGACGAGTGGACAAGATGACGGCGAAGACGTGGACATCGACAGGACAATGTGGGGCGAACTGGAGTCTGAATCAGAAGAAGAGTCGGAGGAGGAGGAATCGGGCGAGGAGGGCGAGGCAGAGATGGGCGGGGTCGGCACTCCCGCGGAGGGACTCGCCACGCCGCTCGGACTCAGCTCCGTGCCGCCCGGACTCGAGACTCCCGACAGCATTGAACTCAGGAAAAAGAAATTGGACTCCGATCTTGACGGAGGAGAGACTCCGGCTCTGTACCAAGTACTGCCGGAGCGCCGCGTGGGGGTGACGTCAGGGATGATGGCGTCCACGCACGTGTACGACATTAACGCAACGAACCCCGTGAAGCGAGCGGGCGCGACCTCGACGGGTCACGGCCCGGCGGGCGGCGTGGAGGTCACGCTGGACCCCTCCGAGCTGGAGCTGGAGCCCGAGGCGGTGGCGGCGCGCTACGAGCGCCATCTGCGCGACCAGCGACCCAACACCCACGAGGACCTCTCCGACATGCTCGCGGACCACGTGGCCAGGCAGAAGAACAAAAGGAAACGTCAACAGAACACGGACTCAAAACATGCGAAGAAATACAAGGAGTTCAAGTTCTAG

Protein

MDGPPGTGSTNNNASVGPPPGMPNFPPMPPPPGSMGPPPGSIGPPPGTMGPPPGTMGPPPGTMGPPPGTMGPPPGAMGPPPGSMGPPPMGPPGPPPVSSSGGPPNMPPGIGPPPPGMMPPGMGPPPMGPPGMGPPPMGPPGMGPPGMGPPGMGPPGMGPPGMGPPGMGPPRMPPNMMRNKNNYNNQNMDMGPPGMRPPMGPWDGPPGPPGPPGPPGPGWGMQSDGPPGWNDQDDDDEEEEEEDGEEDLSSDQHSSLPSLLTMKIETPEEFKNKQGNAGGVVLPKALEEALAYKDQRQAALGSEEDKETDVQKDMEAPPAPVISTEYDVEEDEQSDDENIPDPPMPPVISKQESQASKSNKNKRKKKKKKLAKQKRNEESKTKNNAQEEKRSSDKENEKEADIEYVQENIQFHEMEPMYRQFHRILEAFKISEKKEETIKDEGMDAPKPTKHQDKVQDQFAADDEAAEKNAADEKERLSKRKLKKLSRLSVAELKQLVARPDVVEMYDVTARDPKLLVQLKAHRNTVQVPRHWCYKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRASLQDKEETKTLKAKMRERSRPKLGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLREKKPGDLSEELRTALGMPVGPGSQKVPPPWLIAQQRYGPPPSYPNLKIPGLNAPIPEGCAFGYHAGGWGKPPVDEMGKPLYGDVFGHQTSGQDDGEDVDIDRTMWGELESESEEESEEEESGEEGEAEMGGVGTPAEGLATPLGLSSVPPGLETPDSIELRKKKLDSDLDGGETPALYQVLPERRVGVTSGMMASTHVYDINATNPVKRAGATSTGHGPAGGVEVTLDPSELELEPEAVAARYERHLRDQRPNTHEDLSDMLADHVARQKNKRKRQQNTDSKHAKKYKEFKF

Uniprot

H9J5N3   A0A212FLI8   A0A2A4JNQ6   A0A2W1BYU5   A0A194PHK4   A0A0N0PCE8   + More
A0A026WXB6   F4WDL6   A0A151WQ27   A0A158NIM6   A0A195BC82   A0A151J4P9   A0A195CSE6   Q174Z5   A0A151JVB6   A0A0P4ZXH2   A0A0P6IC20   A0A154P2M0   A0A0P5QU28   A0A3P9IMM2   A0A3P9K850   H2LW52   A0A3P8RXM7   A0A3Q3M223   F1RU38   A0A2Y9FPS9   A0A3Q0E6H9   A0A2Y9FQ51   A0A1U7U1N1   A0A287D6W9   I3N5P3   A0A384DJK5   E2RL65   A0A3Q7PKD8   A0A3Q7PW63   A0A2Y9GPM1   A0A2Y9GVF9   A0A2U3Y931   A0A2I2ULW3   A0A2Y9JMY5   A0A3Q7SGQ3   A0A3Q7STM9   A0A2U3ZW58   A0A2U3VGQ3   A0A3Q7TS94  

Pubmed

19121390    22118469    28756777    26354079    24508170    30249741    + More
21719571    21347285    17510324    17554307    30723633    16341006    17975172   

EMBL

BABH01025033    AGBW02007763    OWR54601.1    NWSH01000949    PCG73406.1    KZ149918    + More
PZC77846.1    KQ459604    KPI92199.1    KQ460594    KPJ13924.1    KK107072    QOIP01000007    EZA60657.1    RLU20869.1    GL888087    EGI67796.1    KQ982850    KYQ49964.1    ADTU01017000    KQ976529    KYM81809.1    KQ980102    KYN17749.1    KQ977306    KYN03626.1    CH477404    EAT41636.1    KQ981702    KYN37457.1    GDIP01207270    LRGB01002226    JAJ16132.1    KZS08411.1    GDIQ01006727    JAN88010.1    KQ434809    KZC06185.1    GDIQ01112335    JAL39391.1    AEMK02000006    DQIR01038324    DQIR01038325    DQIR01070820    DQIR01070821    DQIR01070822    DQIR01070823    DQIR01071405    DQIR01071646    DQIR01071861    DQIR01071862    DQIR01072101    DQIR01075821    DQIR01081759    DQIR01082671    DQIR01085404    DQIR01085952    DQIR01085953    DQIR01096066    DQIR01101185    DQIR01106893    DQIR01116504    DQIR01116505    DQIR01123929    DQIR01123930    DQIR01123931    DQIR01129409    DQIR01130494    DQIR01140448    DQIR01157010    DQIR01157011    DQIR01157893    DQIR01157895    DQIR01160082    DQIR01160083    DQIR01160604    DQIR01161892    DQIR01162635    DQIR01164842    HCZ93799.1    HDA27337.1    HDA51542.1    HDA56661.1    AGTP01072361    AAEX03011631    AANG04000779   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000053097    + More
UP000279307    UP000007755    UP000075809    UP000005205    UP000078540    UP000078492    UP000078542    UP000008820    UP000078541    UP000076858    UP000076502    UP000265200    UP000265180    UP000001038    UP000265080    UP000261640    UP000008227    UP000248484    UP000189704    UP000005215    UP000261680    UP000002254    UP000286641    UP000248481    UP000245341    UP000011712    UP000248482    UP000286640    UP000245340    UP000286642   

PRIDE

H9J5N3    F1RU38    E2RL65   

Pfam

PF04037   DUF382        + More
PF04046   PSP
PF02037   SAP

Interpro

IPR006568   PSP_pro-rich        + More
IPR007180   DUF382       
IPR003034   SAP_dom       

ProteinModelPortal

H9J5N3   A0A212FLI8   A0A2A4JNQ6   A0A2W1BYU5   A0A194PHK4   A0A0N0PCE8   + More
A0A026WXB6   F4WDL6   A0A151WQ27   A0A158NIM6   A0A195BC82   A0A151J4P9   A0A195CSE6   Q174Z5   A0A151JVB6   A0A0P4ZXH2   A0A0P6IC20   A0A154P2M0   A0A0P5QU28   A0A3P9IMM2   A0A3P9K850   H2LW52   A0A3P8RXM7   A0A3Q3M223   F1RU38   A0A2Y9FPS9   A0A3Q0E6H9   A0A2Y9FQ51   A0A1U7U1N1   A0A287D6W9   I3N5P3   A0A384DJK5   E2RL65   A0A3Q7PKD8   A0A3Q7PW63   A0A2Y9GPM1   A0A2Y9GVF9   A0A2U3Y931   A0A2I2ULW3   A0A2Y9JMY5   A0A3Q7SGQ3   A0A3Q7STM9   A0A2U3ZW58   A0A2U3VGQ3   A0A3Q7TS94  

PDB

6QX9     E-value=1.8981e-137,     Score=1257

KEGG

101742628    K12829 splicing factor 3B subunit 2 | (RefSeq) splicing factor 3B subunit 2

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

GO:0005634   GO:0016021   GO:0071013   GO:0005686   GO:0000398   GO:0005689   GO:0071005   GO:0016607   GO:0005524   GO:0003682   GO:0003677   GO:0003700   GO:0006355   GO:0008270   GO:0043565   GO:0005112   GO:0015930  

Length:

922

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00001

outside

1  -  922

 

 

Pi

218.573879

Theta

150.316889

Tajima's D

1.382603

CLR

0.219065

CSRT

0.76111194440278

Interpretation

Uncertain