Gene

KWMTBOMO15064  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004850

Annotation

ubiquitin-conjugating_enzyme_E2_J1-like_[Bombyx_mori]

Location

Bomo_Chr25(-):3876948-3877862      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.936

CDS

ATGGCCGAAATAGTTGAAAAATATAATACGAAATGTCCCGGAGTAAAACGATTAATGCGAGAAGCGATCGAACTAGCCGAGGCCACTGAGGAATATTGTGCAAGGCCTTTGGAAGACAATCTGTTTGAATGGCACTTCACCGTACAAGGACCTAAAGGTACGGAATTCGAAGGAGGCATTTACCATGGAAGAATATTACTACCTAAAGAATATCCCATGCATCCACCTCACATCATTTTATTGACACCTAATGGCAGGTTTGAAATTAACAAAAAAATTTGTCTATCTATATCTGGCCACCATCCTGAGACATGGCAGCCTTCATGGTCAATAAGGACTGCATTGCTAGCTCTCATTGCATTCATGCCAACGCCTGCCGAAGGCACGATAGGCTCGCTTGACTATACACCAGCAGAGCGTAAAATATTAGCTAAAAAGTCCACCAATTGGTCTTGTTCTCAATGTGGAGAAATAAAGTTATTATTGTCGTCCACTGCTGCTAAACCTCTAACAGAAGAAGAGCAGTCCGTGTTGAACCAAATAGCATTCAAAGGCGAAGATGATCAAAGTTCCAAGCCGCCTCCACCTACAGAAGAAGAAACTCCAGAACCTGAACTACAAGTTTTGGAGTCTACTGAACCAGTTACTGGCTTTTTAGATCAACTCACAGAAATTCTTGTAGCACTTCTTGTAGGTGCAATTGGAATATTCATATACAGGCGTTGGAATGCTTTTTATGCAGAAGCAGAAACTGAATTGTAA

Protein

MAEIVEKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYTPAERKILAKKSTNWSCSQCGEIKLLLSSTAAKPLTEEEQSVLNQIAFKGEDDQSSKPPPPTEEETPEPELQVLESTEPVTGFLDQLTEILVALLVGAIGIFIYRRWNAFYAEAETEL

Uniprot

G8GE15   A0A2W1C171   A0A2H1WTB4   A0A1E1WMI8   A0A0L7LMC7   A0A194PGN8   + More
A0A0N1IP56   A0A212FLI9   S4Q039   A0A1B6L4F2   A0A2A3EPY2   A0A088ADM3   A0A1B6ELJ2   A0A1B6ILA8   D6WFJ4   A0A0A9ZGF9   A0A0J7KJ50   E2A5V8   A0A151WU97   E2BDY0   A0A195AYV1   A0A158NYL4   F4WY17   A0A195FT62   A0A195DFE7   A0A151IF91   A0A026X3P7   V5I998   A0A2P8ZIM2   K7J036   A0A1B6CD29   E9JDF6   A0A1Y1L6X2   A0A0T6BEW5   A0A1W4WA37   A0A224XVC9   A0A069DRW9   A0A0V0GEM5   A0A2J7QHP0   A0A023F7U9   J3JUG1   J9JQW7   A0A154PD53   A0A0K8T904   A0A2R7W8R3   A0A0N0BC19   A0A1B6D8V1   A0A067R646   U4UEC7   N6TV57   A0A0P4W4T7   R4FNE2   A0A1Y1L866   A0A1Z5L7K7   A0A2I9LPX7   A0A293MVU9   G3MMK2   A0A2R5LN29   A0A023G7P6   J3SFJ9   A0A131XE18   A0A131YVR7   A0A224Z345   A0A0N4Y4C8   L7M0M9   A0A0B8RWJ1   B7QB87   A0A0K8REQ5   A0A1S4M0R5   T1E491   A0A3S1BQM7   A0A3B4ATI9   A0A0F7Z458   A0A1S3F6D7   T1KAW7   B5X1W4   A0A1W4ZFC4   A0A1W7RC00   A0A1E1XBN1   A0A2D4FEV1   A0A1E1XVR5   A0A1S3F696   A0A3P9AAG1   A0A2D4K1R1   V3ZR05   A0A2D4M0E3   H3AND0   A0A3B4CB46   A0A0C9SC82   A0A3B3U742   A0A3B3X504   A0A087Y8F5   A0A250XYA8   W5UCS3   A0A023FFP7   A0A0D6LEJ3  

Pubmed

19121390    28756777    26227816    26354079    22118469    23622113    + More
18362917    19820115    25401762    26823975    20798317    21347285    21719571    24508170    30249741    29403074    20075255    21282665    28004739    26334808    25474469    22516182    24845553    23537049    27129103    28528879    29248469    22216098    23025625    28049606    26830274    28797301    25576852    25476704    23758969    25463417    20433749    26358130    28503490    29209593    25069045    23254933    9215903    26131772    28087693    23127152   

EMBL

BABH01025034    JN127348    AET05794.1    KZ149918    PZC77843.1    ODYU01010900    + More
SOQ56298.1    GDQN01002821    JAT88233.1    JTDY01000578    KOB76597.1    KQ459604    KPI92198.1    KQ460594    KPJ13925.1    AGBW02007763    OWR54602.1    GAIX01000458    JAA92102.1    GEBQ01021603    JAT18374.1    KZ288206    PBC33101.1    GECZ01030983    GECZ01018183    JAS38786.1    JAS51586.1    GECU01032120    GECU01026178    GECU01020393    GECU01019999    GECU01008262    GECU01003253    GECU01002256    JAS75586.1    JAS81528.1    JAS87313.1    JAS87707.1    JAS99444.1    JAT04454.1    JAT05451.1    KQ971328    EEZ99808.2    GBHO01000433    GDHC01001569    JAG43171.1    JAQ17060.1    LBMM01006879    KMQ90236.1    GL437069    EFN71176.1    KQ982748    KYQ51321.1    GL447693    EFN86106.1    KQ976701    KYM77376.1    ADTU01004021    GL888434    EGI60942.1    KQ981276    KYN43790.1    KQ980953    KYN11174.1    KQ977854    KYM99348.1    KK107013    QOIP01000003    EZA62902.1    RLU25100.1    GALX01003310    JAB65156.1    PYGN01000045    PSN56348.1    GEDC01025956    JAS11342.1    GL771866    EFZ09241.1    GEZM01065113    JAV68551.1    LJIG01001082    KRT85858.1    GFTR01004363    JAW12063.1    GBGD01002527    JAC86362.1    GECL01000327    JAP05797.1    NEVH01013973    PNF28086.1    GBBI01001392    JAC17320.1    BT126874    AEE61836.1    ABLF02027172    KQ434875    KZC09761.1    GBRD01003827    JAG61994.1    KK854447    PTY15929.1    KQ435944    KOX68262.1    GEDC01015179    JAS22119.1    KK852931    KDR13633.1    KB632256    ERL90683.1    APGK01050868    KB741178    ENN73150.1    GDKW01000207    JAI56388.1    GAHY01000603    JAA76907.1    GEZM01065114    JAV68550.1    GFJQ02003720    JAW03250.1    GFWZ01000443    MBW20433.1    GFWV01018712    MAA43440.1    JO843103    AEO34720.1    GGLE01006702    MBY10828.1    GBBM01005574    JAC29844.1    JU176383    GBEX01003797    AFJ51906.1    JAI10763.1    GEFH01003332    JAP65249.1    GEDV01005248    JAP83309.1    GFPF01013130    MAA24276.1    UYSL01020377    VDL74333.1    GACK01008395    JAA56639.1    GBSH01002994    JAG66033.1    DS899572    EEC16109.1    GADI01004191    JAA69617.1    ABJB010177736    GAAZ01002791    JAA95152.1    RQTK01000141    RUS86359.1    GBEW01001161    JAI09204.1    CAEY01001943    BT045033    ACI33295.1    GDAY02002799    JAV48668.1    GFAC01002523    JAT96665.1    IACJ01059945    LAA46015.1    GFAA01000245    JAU03190.1    IACL01019481    LAB02659.1    KB203357    ESO84955.1    IACM01052984    LAB26817.1    AFYH01179415    AFYH01179416    AFYH01179417    AFYH01179418    GBZX01001478    JAG91262.1    AYCK01013665    GFFV01003587    JAV36358.1    JT412299    AHH39796.1    GBBK01003676    JAC20806.1    KE125199    EPB70359.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007151    UP000242457    + More
UP000005203    UP000007266    UP000036403    UP000000311    UP000075809    UP000008237    UP000078540    UP000005205    UP000007755    UP000078541    UP000078492    UP000078542    UP000053097    UP000279307    UP000245037    UP000002358    UP000192223    UP000235965    UP000007819    UP000076502    UP000053105    UP000027135    UP000030742    UP000019118    UP000038043    UP000271162    UP000001555    UP000271974    UP000261520    UP000081671    UP000015104    UP000087266    UP000192224    UP000265140    UP000030746    UP000008672    UP000261440    UP000261500    UP000261480    UP000028760   

PRIDE

G8GE15   

Pfam

PF00179   UQ_con        + More
PF00400   WD40

Interpro

IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF54495   SSF54495        + More
SSF50978   SSF50978       

Gene 3D

3.10.110.10     2.130.10.10    

CDD

cd00195  UBCc

ProteinModelPortal

G8GE15   A0A2W1C171   A0A2H1WTB4   A0A1E1WMI8   A0A0L7LMC7   A0A194PGN8   + More
A0A0N1IP56   A0A212FLI9   S4Q039   A0A1B6L4F2   A0A2A3EPY2   A0A088ADM3   A0A1B6ELJ2   A0A1B6ILA8   D6WFJ4   A0A0A9ZGF9   A0A0J7KJ50   E2A5V8   A0A151WU97   E2BDY0   A0A195AYV1   A0A158NYL4   F4WY17   A0A195FT62   A0A195DFE7   A0A151IF91   A0A026X3P7   V5I998   A0A2P8ZIM2   K7J036   A0A1B6CD29   E9JDF6   A0A1Y1L6X2   A0A0T6BEW5   A0A1W4WA37   A0A224XVC9   A0A069DRW9   A0A0V0GEM5   A0A2J7QHP0   A0A023F7U9   J3JUG1   J9JQW7   A0A154PD53   A0A0K8T904   A0A2R7W8R3   A0A0N0BC19   A0A1B6D8V1   A0A067R646   U4UEC7   N6TV57   A0A0P4W4T7   R4FNE2   A0A1Y1L866   A0A1Z5L7K7   A0A2I9LPX7   A0A293MVU9   G3MMK2   A0A2R5LN29   A0A023G7P6   J3SFJ9   A0A131XE18   A0A131YVR7   A0A224Z345   A0A0N4Y4C8   L7M0M9   A0A0B8RWJ1   B7QB87   A0A0K8REQ5   A0A1S4M0R5   T1E491   A0A3S1BQM7   A0A3B4ATI9   A0A0F7Z458   A0A1S3F6D7   T1KAW7   B5X1W4   A0A1W4ZFC4   A0A1W7RC00   A0A1E1XBN1   A0A2D4FEV1   A0A1E1XVR5   A0A1S3F696   A0A3P9AAG1   A0A2D4K1R1   V3ZR05   A0A2D4M0E3   H3AND0   A0A3B4CB46   A0A0C9SC82   A0A3B3U742   A0A3B3X504   A0A087Y8F5   A0A250XYA8   W5UCS3   A0A023FFP7   A0A0D6LEJ3  

PDB

2F4W     E-value=8.40719e-30,     Score=323

KEGG

100852386    K10578 ubiquitin-conjugating enzyme E2 J1 [EC:2.3.2.23] | (RefSeq) ubiquitin-conjugating enzyme E2 J

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0061631   GO:0016874  

Length:

253

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

18.36121

Exp number, first 60 AAs:

0

Total prob of N-in:

0.22034

outside

1  -  253

 

 

Pi

228.38249

Theta

175.667787

Tajima's D

0.944042

CLR

0.877562

CSRT

0.646517674116294

Interpretation

Uncertain