SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15062
Pre Gene Modal
BGIBMGA004851
Annotation
PREDICTED:_uncharacterized_protein_LOC106136276_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.693
 

Sequence

CDS
ATGGATGCTGGAAATGAAATGCATATACAGGAAGGAACCAACACAACCCTGACAACATGTACCAAAATGACAGAGGAAGTAGACAGAAGACATGGCGTGAATGGTAACAGCAGCAGTAAGGGTACAAGTGATGATGTTCCAGTTCACAGCTCAGCTATCAATGCCACTGGAGGAAGACTCAAGTTCTTTAAAGATGGAAAATTCATTTTGGAACTGGTACGCGGATGCCCACGTGAAGGCGAGCGGGCTGGATGGGTGTCAGTGCCGCGGAAGACATTCTGGCCGCCCGCCGCCGCGCCCTCCACTCCGCCTGCTGGCGCCCCGCCCTCCGCTGCGCTCAGCCTCTCCGACGATAATAGTTCCGTTCAGTCCTCGCCTTGGCAGCGCGACCATTGCTGGAAGCAGGCAACGCCGCGTCGAAACATATCCAAAGAGTTAGCAATGTACTACTGCAGGCCGAGCACGTTGCAGATATCTGCTATAAACACGGCAAGCCGCCTTAAGCGGAGACGGCCCTATGATCTGACCCATCTCGACGGGCTCGTGAATGGAGGCAGTTCTAAAAAGTCAATCAGTAACGGCATCTACGATAGAAAGCGTAACGGCGACGTGGCATCGCCTGAGCCGCGGGGCGAGGACGCTATCGACGGTGTTACGAAAACTAAATCGAGCTCTGACGACGACAGGTGGACGGATTACGATCGAGAAAAGTACTACCATATGAAATTGAAAAAACCATACCAGTATCGGAAGCTCAGGGTGTACAGGAAGACTCGATCCGCCATAAGGCGTAAAGAGTTAACGAAAACGATTAACAGACTTTACGAACGACTTCCGCCGATTCCGGCGCCCGTTAACGCGAAACTAGCGAGCTGCCGGCAGGAACACATGATGGTTTCTCCAAGAAAACGAATCCTCCGGGAACTCGAGCGGGTCAGCCTCGAAGATCAAGGCAGCAAACGACGCGCGAAGACCGCCCCCGCGCTCAGCACCGCTTCGTACCCGTCGTCGCCGGGCCCGAGTCACGCGGCGCACAAACCACCGCAAGAAACGCCTACGCGATCTCACAATGGAACTGCTGCACCACGGAAAGAGGCAGCCGTTTCAAAGAACGTGAGCAGCTACAGCATTCATTCCCTGTTAAGCATGCCCGACGAGAGTCCAACTCGACCGGCGCCGCCTCTCCCGACGGAATCTCCGTCGAGCGTACATTCGCCGGACCTGAGCCCGAGTCCGGACGGGTACCGGTACCGGCACTCGCTGGGCGTGCGGGACTCGCCCACGCCGCCGCACGAGATGGCTCGGTACCGCGCGCTGACGCCGTACGCGCGCCACTGGAGCCCGGCCGCGTACCGCTCGGCGGCGCGCGAGGAGTGGCGGGACCTGCCCTACGTGTACGGCTACGGGTACGTGCCGCCCTACGGGTACCGCGCCCCGCCGCCGCTGTGGATGCACTACGCCGTGCCGCCTAGTCCCTGGGCGCCGCTCACGCTGCCCCTCCTCACCGACCACATCCCTAAAGATGAATCCGCTTCAGATTTGCCGCTGAACTTGTCGAAGCACTGA
Protein
MDAGNEMHIQEGTNTTLTTCTKMTEEVDRRHGVNGNSSSKGTSDDVPVHSSAINATGGRLKFFKDGKFILELVRGCPREGERAGWVSVPRKTFWPPAAAPSTPPAGAPPSAALSLSDDNSSVQSSPWQRDHCWKQATPRRNISKELAMYYCRPSTLQISAINTASRLKRRRPYDLTHLDGLVNGGSSKKSISNGIYDRKRNGDVASPEPRGEDAIDGVTKTKSSSDDDRWTDYDREKYYHMKLKKPYQYRKLRVYRKTRSAIRRKELTKTINRLYERLPPIPAPVNAKLASCRQEHMMVSPRKRILRELERVSLEDQGSKRRAKTAPALSTASYPSSPGPSHAAHKPPQETPTRSHNGTAAPRKEAAVSKNVSSYSIHSLLSMPDESPTRPAPPLPTESPSSVHSPDLSPSPDGYRYRHSLGVRDSPTPPHEMARYRALTPYARHWSPAAYRSAAREEWRDLPYVYGYGYVPPYGYRAPPPLWMHYAVPPSPWAPLTLPLLTDHIPKDESASDLPLNLSKH

Summary

PDB
5E24     E-value=4.00831e-07,     Score=131

Ontologies

GO

Topology

Length:
521
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00296
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00237
outside
1  -  521
 
 

Population Genetic Test Statistics

Pi
253.157624
Theta
207.980652
Tajima's D
0.566056
CLR
0.239671
CSRT
0.530023498825059
Interpretation
Uncertain
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