SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15061  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004821
Annotation
PREDICTED:_metastasis-associated_protein_MTA3_[Amyelois_transitella]
Transcription factor
Location in the cell
Mitochondrial   Reliability : 1.684 Nuclear   Reliability : 2.065
 

Sequence

CDS
ATGGAGGAGGAATCTACCGAATTGCCAGGTACAGACGGCCTGGCGCCGAAGCAGCGGCACCAAGCGAAACACCGCGAGCTGTTCCTGTCCAGGCACGTGGAAACGTTGCCGGCGACGCACATTCGCGGCAAGTGCACCGTCACGCTACTCAACGAGACGGAGTCGCTGCTCAGCTATCTCAATAAGGATGACGCATTTTTTTATTGTTTAGTATTTGATCCTTCACAAAAGACTTTATTAGCAGATAAGGGAGAAATCAGAGTTGGAAGTAGATATCAGACTGAAGTAACTAATTTATTAAAAGAAGGCGAAGAGGACCCACGGATCAGTGAAGAATTAGAAACGTTGGTTTGGACACCGGAGCACGGGCTCACGGACCGACAGATAGATCAGTTCTTAGTTGTGTCGCGGTCCGTGGGCACGTTCGCACGAGCCCTCGACTGCTCCTCCAGCGTCAAGCAGCCCTCGCTGCACATGTCCGCCGCCGCCGCGAGCAGGGACATCACACTGTTCCACGCGATGGACACCCTCCACAAGTCTGGCTACAGCATAGAGTCGGCGCTGTCGTCGCTGGTGCCGGCGTCGGGCCCCGTGCTGTGCCGCGATGAGATGGAGGAGTGGTCCGCCTCCGAGGCCAACCTGTTCGAGGAGGCACTCGACAAATACGGAAAGGACTTCGCTGATATACGACAGGACTTTTTACCATGGAAAACGTTAAAGAATTTAGTGGAGTACTACTACATGTGGAAGACGACGGATCGCTACGTACAACAGAAACGCGTGAAAGCGGTCGAAGCTGAGTCAAAACTGAAACAAGTGTACATTCCCAACTATAACAAACCGAATCCGGCGTTAATTACGAACAACAGCAGTGGTAGCAAAAGCGGTGTCCTAAACGGAGGCACAAACGGCACGCCCGCGCCGCAACTCTGTGCATCATGTCAAGTTACAAGTTCAAACCAGTGGTATTCATGGGGACCACAGCATTTACAGTACAGATTGTGTGGTACATGTTGGCAGTACTGGAAAAAATATGGCGGTCTAAAGACGGCGGGTGTGTTCAGTGAGAGCGAGGCGGAGACGACCAAGAGTGTGAGGGAACCTGACGAGACCGCGCTCTCCGCGCCGCACCGGCCCCACCGCTGCGCCGTGCTCAACTGCGCCAAGGAGTTCAAGTTACGCGCCCACCTGGCGCGGCACGTGGCCACCGCGCACGGCGGCGAGGGCGCGCGCCCCGTCATGAAGACGCGCGCTGCCTTCTACCTGCGCGCGTCGCCCTACACGCGCCTCGCGCGCCGCCTGTCCCGCACGCTGCGCCGCCCCAAGCACTACGCGCGCTCGCCCTTCTCGCCCATCAACCTGACGCTGCTCAAGAACGACTGCACCGCGGGGGCGGAAGCGGGCAGCGCGAGCGGGGCGGCAGGTGCGGCGCGCGTGCGCGGGCCAGTGGGCGCGGTGGCGGCGCGTCTGGCGGCCGCGCGTGGGGTGCCGCTGTCCCGCTCCGCCACGCACGAGTGGCTGCTGCTCACGCCCAAGGACCGCATGCCCGTGCCCGACCACGTCGCCTTCCCCAAACCGCCCAAGGCACCAGACGGCAGCCTGCTGTACGAGCGCGTGCTGTCCCGCGGCGAGCTGGAGGCGCGCCGGGCCGAGCCCGCGCCGCCGCTCAAGCGCCGCGCCTACGACGACATCAACGGACTCGACAGAGTGGGCGAGCGGTCGCGCGAGACGCTGGCGCCGCCCGCCAAGCGCCCCAACAAGCACCCGGCGCCCATGCAGCGGCCCTCGCGCGAGCAGTACGCCGCCATGTGCGCGCGCGCGCAGGCCACCGGACAGCCGCTGCCGCCGCACGTCTTCGCGCACGTAAATGGCAAACCGACAAACATCACAGGACGCGGCGGCCGCCGACACGTGATCTCGTGGATGGACGCTCCCGACGACCTATACTTCAGAGCCACCGATGCGGCCAAGGCGGCGCGGCGCGCGCTGAGCGGCGGGGAGGTGCGGCGCGGGGCGCGGGCGCCGTGGCGGGCGGTGCGCGCGGGCGGGAAGGCGCCGCCGCTGCAGCTCGTGATCCTGGACTGA
Protein
MEEESTELPGTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYCLVFDPSQKTLLADKGEIRVGSRYQTEVTNLLKEGEEDPRISEELETLVWTPEHGLTDRQIDQFLVVSRSVGTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLHKSGYSIESALSSLVPASGPVLCRDEMEEWSASEANLFEEALDKYGKDFADIRQDFLPWKTLKNLVEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNYNKPNPALITNNSSGSKSGVLNGGTNGTPAPQLCASCQVTSSNQWYSWGPQHLQYRLCGTCWQYWKKYGGLKTAGVFSESEAETTKSVREPDETALSAPHRPHRCAVLNCAKEFKLRAHLARHVATAHGGEGARPVMKTRAAFYLRASPYTRLARRLSRTLRRPKHYARSPFSPINLTLLKNDCTAGAEAGSASGAAGAARVRGPVGAVAARLAAARGVPLSRSATHEWLLLTPKDRMPVPDHVAFPKPPKAPDGSLLYERVLSRGELEARRAEPAPPLKRRAYDDINGLDRVGERSRETLAPPAKRPNKHPAPMQRPSREQYAAMCARAQATGQPLPPHVFAHVNGKPTNITGRGGRRHVISWMDAPDDLYFRATDAAKAARRALSGGEVRRGARAPWRAVRAGGKAPPLQLVILD

Summary

EMBL
BABH01025034    BABH01025035    KQ460594    KPJ13928.1    AGBW02010293    OWR48792.1    + More
ODYU01010900    SOQ56295.1    KQ459604    KPI92195.1    GEZM01066561    JAV67792.1    GEZM01066560    JAV67793.1    FX985697    BBA84435.1    GFDF01003222    JAV10862.1    FX985698    BBA84436.1    NEVH01013196    PNF30086.1    PNF30083.1    PNF30084.1    PNF30085.1    KQ971354    EFA06006.1    KK852425    KDR24149.1    GECZ01012812    JAS56957.1    GECZ01027627    JAS42142.1    GEBQ01009861    JAT30116.1    GEBQ01010909    JAT29068.1    GEBQ01006495    JAT33482.1    GEBQ01017038    JAT22939.1    CVRI01000040    CRK94885.1    GECZ01017879    JAS51890.1    GECZ01029653    JAS40116.1    GANO01000010    JAB59861.1    GEBQ01029257    JAT10720.1    GEBQ01019207    JAT20770.1    JRES01001160    KNC24990.1    GBHO01005875    JAG37729.1    GBRD01005301    JAG60520.1    GBGD01000569    JAC88320.1    CP012526    ALC47524.1    GECL01002045    JAP04079.1    CH916369    EDV93240.1    CH940652    EDW59297.2    AE014297    AGB95676.1    AAF51980.2    AAF51981.2    CH902617    EDV41634.2    CH933806    EDW14375.2    ACL83470.1    CM000160    EDW97766.2    CM000364    EDX11759.1    OUUW01000013    SPP87922.1    SPP87924.1    KQ435863    KOX70373.1    CH480821    EDW54992.1    KQ414667    KOC64727.1    JXJN01019807    JXJN01019808    SPP87926.1    SPP87923.1    KQ434809    KZC06206.1    CM000070    EDY67911.2    CH954181    EDV47927.1    KK107072    QOIP01000007    EZA60668.1    RLU21032.1    BT015176    AAT94405.1    GL443424    EFN62114.1    LNIX01000002    OXA59815.1    CH964232    EDW81751.1    KRF99526.1    KA648799    AFP63428.1    CH479179    EDW24881.1    KZ288194    PBC33929.1    UFQT01000674    SSX26406.1    KQ983189    KYQ46809.1    KQ980856    KYN12151.1    ADTU01017025    ADTU01017026    AF170345    BT003590    AAD55388.1    AAO39593.1    KQ978068    KYM97649.1    SPP87925.1    LJIJ01000001    ODN06646.1    JH432211    KQ981285    KYN43149.1    GL447812    EFN85907.1    GBYB01012630    JAG82397.1    GBYB01012629    JAG82396.1    GL888087    EGI67785.1    AAAB01008898    EAA09201.5    AXCN02001181    AXCM01000316   
Pfam
PF00249   Myb_DNA-binding        + More
PF01426   BAH
PF01448   ELM2
PF17226   MTA_R1
PF00320   GATA
Interpro
IPR001005   SANT/Myb        + More
IPR040138   MIER/MTA       
IPR009057   Homeobox-like_sf       
IPR000679   Znf_GATA       
IPR017884   SANT_dom       
IPR013087   Znf_C2H2_type       
IPR000949   ELM2_dom       
IPR001025   BAH_dom       
IPR035170   MTA1_R1       
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF46689   SSF46689        + More
SSF57667   SSF57667       
PDB
5ICN     E-value=6.68987e-88,     Score=828

Ontologies

Topology

Subcellular location
Nucleus  
Length:
694
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00004
outside
1  -  694
 
 

Population Genetic Test Statistics

Pi
241.925346
Theta
176.99284
Tajima's D
1.467457
CLR
0.223457
CSRT
0.781010949452527
Interpretation
Uncertain
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