SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15056
Pre Gene Modal
BGIBMGA009030
Annotation
hypothetical_protein_KGM_08988_[Danaus_plexippus]
Location
Bomo_Chr25(-):3565770-3583627      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.212
 

Sequence

CDS
ATGTATCCGGAAAGAATAATGTCGCCGTACACGGTGATCATCAGACGCAGTGGGAACCCCTTCGAGCTAGCTCACGTGTTGGTGTCGTGGCTAATAGGAGCTGGATATGACGCATACGTGGTCGTCGGCTGTGCCACCAGAGACACTTGCATGGCTATAAAGTACAGGAGCATTTGTGCTGACATCCCTGATGAGAGCGAGAAAAAAGAAGAAATTCCACCACCTGACGAAGAGCCCAGATATCGCCTGGTGCCCCTACCGGATCTCACTTCTAAGTACTGCCGTGATATGGACAAGAAAGCCGATGATAAGAAACAAGCTGAACTGAACAAGACCGAGAAAGAGCGACTTCGTAAAATTGCTGATTTGGAAAAAGCCCCGGCTGACGCTATTAACGGGTGGAGAACTCACGCCTGGGTCCTCGTGCTGCCGGGATACATGGGAATCGACGAACCTTTCTTCATAGAGCCGAGCGAAGGCGAAGGTCATCTCCTCGACTCAGAAAAATACCAATTCATAGACAGCGTGTACAATCACGAAAACTACTATGCAAACGTCCAAAGCACAGACATTGGGTTGGACAGCCTGAATTATGATCTGAGCGACCTCTCAGCGTGGGAGCATCTTCTGGCCGGCGAGCCCCACCATCGGAGGCAGATGGTCGGCATTGACATCGCCGACAAGAAGACAGCTGTGCAAACAGAGAAGCATCTGGATATGCCAGTCAGCTGGGTTGAGAAACTGGAGATTAGTACTGATGAGTACGGTCAAAGATATCCGGGCAGCCACAAAGTGATACACTACAAGAAAGTTTTACTGGATAAGTTCTCGCCCTACTCCGAGAGGGATGGTGTAGTGAAGAGGATCAGAACGTTTGAGGACTACGCTTTGACCGTCCCGCTGATCACGTACGAGTGGTACAAGCATCGCGTCGACAAAATGGAAACCGTTCGAATAGATCACACGAAGCGTGAGATACGCGAGACGTTCGGTATCGGAAGGAGGGATCATTTACTCAAGCACGTGTACTCCATGGACGCGCTGGTCGGCTCTGTGGAGGCAGTCAGGACCATGGAGTTCAATTACTACGCCCGACTTGACCACCTCACGAGGCTGGTCTGCACTACCCTTACATTCGATGAATATTATTCGAACAGAAGCGACAGATTAGAATCAAGATTAGTAATATATACAGAAGGAACGAAAGAAACTAAACGTCAAATAAAGGACGTAACTGAGACGTACAGCAGAAACCATGAGATCCCATCAAAGCAAGACGTCTGGAAGAAGATCTTCCACCTCCAGGACAATACTATAGAACTGCTGTACCAATACGCGTACAATTACGTAACTAACAACACAAGGAGCTATATAAAACCTAACTTGGCTGAGACCGGCGGGAAAATCTTGTTCTATCCCGACAAAACCTCCGGGTATATCGCCGACCCGAACGCTAAACAACCCCGCGACTTGGAAGTGTATTACGCCCTCTGCGAAAACATGGAATGGGAGCACGCGACCACGAAGCAGATACGCGACAGAGAGACCGACGTCAATGGATATCTGCGGCAGAGACACAAGGAGCTCACCGAACCGATGCTGGCCGTCGCGCTCTTCGATACCGAGAAGAACGAGGCCGCCAAGAAAGGCTGGAAGGAGCAGGAAGCAAAAAAAGCCGAAGTGACCGAACGAGAAAAGGAAGCTGAAATCGATCCGTTAGCTCCGTACCTGGCTCGGATGTTCGGCTCGGGGCACGGCTCCGGGAATCCGCTCACTGTCAAAGAAGCCACTCTAATCAGGGAACAGTGCATCAACGATTTCAAATCCAAGCAATTGGCCCGACAGATGCTCGTCCAGGAGAGGTTCGAAAAGTTCAAAATATTAAATCACACAAGTATTACAATACAACTTTATCCCTGCTGTCCATCTGTAAACCACAAGACAATGGCAAAGTGTGGAGCATGTGGAAAATTCTTGTCAACCGCGGACTGTGCGCGTTGTAGTAAATGCAGTGACAATTTCCATAAAGGATGCGTGGCAATCCCATCTACGGGCGCTGCGCCTCGGGGCTGGATCTGCCCTAGTTGCTCAGCGAAGGTACCTCGTGGGGATAATGCGGCAACTCCTGTACGAGGGTTGACAACTGTCGGGGTGCATCACACTTCGAGCGAGGGAGATGTTGATGCAGATACGATGAATCGGTCGCTGGAGTCTCGTGTCGACCTTGGCTTAGAAATCCGATCTTTTAAGGATGAGCTGGTGGGCCTAAGAACTGACTTGAGAGAGTGCCGAAATGATATCGCTGAGTTTAAGGAGCTCCTCAAGTCTTGTCATGGACGCATCGACGCGGTGGAAGCCCGAGTGCTTGGTCTTGAGGCTCGTCTAGCAGAGATCGTCTCAACAGCAGCAGGTTCTGACTTGGATTCCACGGTGGCTGAACTTCGCATTCAGCTGCGTGAACGCGACCAGGACTTGCTCAGGAATGATATCGACATCATTGGTTTGCCGGAAGTCCGTGAAGAAAGCGCTTGTCATTTAGTCCAGGTTGTGGCGGTAAAACTGGGAGTGAAACTTGACGTGCGCGACATAGTTCACGCGGAGCGGATTGGTGCAGTAAGACGCAATTTCACTGAGGGCGACGAGAATCGTCCTCGTATACTATCAGTACGACTGGCTCGTCGCTCGGTTCGCGATGCACTATTGAAGGGAGCCCGCGTGCGCCGTAACCTCTCCACTACTGATTTAGATGTACCTGGCCCCGTCCGTACTGTATATTTAAATGAACGTTTGTCCGCATATAATCGCAAGCTGTTTGGTACTACCCGTCAAAAGGGAAAGGATAAAGGTTGGAAGTTTGGGGAGGAGGGCCGTGCACCTTGTGTGTCAGGCTACAGGCTCAAGCATGTTCCTCGACCAGTTAGTATAAGGGGTGGTCGTGGTGGCGGGGTGGCCTTTTATCTCAGAGCTGATATAAGTGCTCGGGTGTGTATGCACCCCGGACATTTGGATGTTGAACAGTTGTGGATAACAGTGAATTTTTGCGGGAAAAAGCTATTAATAGGCACTGCATATCGCCCCCCTTGGTCTGATCTGGAAAATTTCCTAGAGGGATTGACCGAAAGTATTGGTGCTATGGCTCCTTATGACAATATAGTGCTTCTCGGAGATTTTAATGTAAACCTATTGGACTGTAATTGTTCTAGAACAAAAAAAATAAATGAATTTCTAAGCCACTTCAGTCTCTCGCAAATAGTAAGGACTGCAACACACTTTATGAGTGGTAGTAGTACTCTGTTGGATGTTATTTGTACTGACATTGGCATTAATGATGTCGGGGTTGATTATATTCCCGAGCTTGGCCACCATGCTTTTGTCACATGTGAGACTTTGATCCGAAAGGAAAGACCAATGTCTAGAATGATCACTTCCCGTCAATTTAAAAATATCTTGGAGGAGTTCTTTACTCAGGATCTAAATACAATACCCTGGTCGAACATCGCCCTCCTGGATGACGTTGACACGATGGTTTACACTTTTTCTATGTTTATTCTGTACCTGTACGATCTCCATGCTCCGCACAAAACCCTGAAATTCAAAACACGTTCCACTCCTTGGATTACTGATAATGTTCGATTATTGTTTAAATTGCGAGATGCTGCACGCTATAGATCACATGTAACTCAGGTTCATAGTCATAAACAGTATTATTTAGACCTTAAGAAGCAGGCAGCTAGCGTCTTAGCATCGGAAAAAAAGACCTACTACAACAATTATATTAATAGCAACTTCGGAAACCCTAAAAAGTTATGGAAAAATCTGAAATCTGATGTGATTCCGTCACATCAGGAGAAAGCATTGCCTGAACACCTTAATGACGCTAATGCTATCAATGATGCTTTTCTGGATGTACCCGGGGTCTGTAGTTCTGACGTTTCAGGATACTCATTCTTTGAGTATTCTAACACATCTCCAAAGTTTACGCTTAAAACTGTCAACCAGGATACGGTTCTTAAGATTATTAACAGCATTAAATCCAACGCTCAAGGCACTGACGGGATAAGCGGTGAGATGATATCGCTCTCACTGCCTTCAACATTGGAGGCGATTACTAGCATTATCAATAAGTCCATTGATACAAATACGTTTCCTGCTCAGTGGCGATGTTCTGTGGTTAGCCCTATTCCGAAAGTCACGCACCCTCAAGCTTTTAAAGATCTTAGGCCTATTAGTGTGTTGCCTTTTCTATCCAAGATCTTGGAGAAGGTAGTTTACTCACAGGTAGCAGCATATATCGAATCAAATAACATTCTTCCAGTGCTTCAATCGGGTTTCAGAAAAAGCCGAGGAACGGCCGCTGCTCTTACTGACATTGTGGGTAATATTCTCGAGGCTCGTGACAGGAGCCAGGGTACGATACTGACGCTGCTGGATTTCTCACGGGCTTTTGATACAATTAACACTGCCTTACTCTTAGCAAAATTAACTCACTATGGGTTCTCTGATAATGCTGTGCAATGGTTTAGCAGTTATATGTCGAGTAGAACGCAATTTGTACAGATACGGAAAGAAGATGGAACTAAACTAACCTCTACTTCTAAGCCGATTACTAGAGGCGTTCCCCAAGGTTCTGTCCTGGGACCATTGTTATTTATTTTGTACAGTGCAGATATCACTCAGTGTTTCAAGAATTGTAAATACCATGTTTATGCTGACGATGTACAATTATACCACTCTTTTGATGTTGGAGATACCCCTTCTGCTGTCAGTTTTATCAATGAGGATCTGCAGAGGATTGTCTCTTGGTCTGAACAGAATTCCTTAGTATTGAACCCCTCTAAGTCTAAATACATGATACTAGGCAGTAAATCTCAGATAGCAAAGATTTTATCACTCGATCCTAAGGTGACTGTTTCGGGTAAGGAAATTGATCGGGTGGAGTTAGCATGCAGTTTGGGTTTGACAATTGATCCCGAATTGCGATTCGAGGCCCATATTACAAAGAATTTAAGAACTTGTTTTTACAGACTGAAGATTCTGTACTCGTTTAGACAGTACTTGAACAACGAATACAAAAACAAGAGACTGTGGTACTTAGCGAACCAATTCATTCTGACACCCGAGAAAGAGAGTAACTACTTCACTATGAGTGCGGAATTAGCATTCCAAGTACACACACTAGAGGTGCGATTGACAAGGCATCAAGATTTGTCAGGTCCAAGATATAAAATCCTCCTAGAGTATCTTGACAAACATCCATTACTGAAGGAATATAATCGTTCAAAGAATTATTATGGCATAAAATAG
Protein
MYPERIMSPYTVIIRRSGNPFELAHVLVSWLIGAGYDAYVVVGCATRDTCMAIKYRSICADIPDESEKKEEIPPPDEEPRYRLVPLPDLTSKYCRDMDKKADDKKQAELNKTEKERLRKIADLEKAPADAINGWRTHAWVLVLPGYMGIDEPFFIEPSEGEGHLLDSEKYQFIDSVYNHENYYANVQSTDIGLDSLNYDLSDLSAWEHLLAGEPHHRRQMVGIDIADKKTAVQTEKHLDMPVSWVEKLEISTDEYGQRYPGSHKVIHYKKVLLDKFSPYSERDGVVKRIRTFEDYALTVPLITYEWYKHRVDKMETVRIDHTKREIRETFGIGRRDHLLKHVYSMDALVGSVEAVRTMEFNYYARLDHLTRLVCTTLTFDEYYSNRSDRLESRLVIYTEGTKETKRQIKDVTETYSRNHEIPSKQDVWKKIFHLQDNTIELLYQYAYNYVTNNTRSYIKPNLAETGGKILFYPDKTSGYIADPNAKQPRDLEVYYALCENMEWEHATTKQIRDRETDVNGYLRQRHKELTEPMLAVALFDTEKNEAAKKGWKEQEAKKAEVTEREKEAEIDPLAPYLARMFGSGHGSGNPLTVKEATLIREQCINDFKSKQLARQMLVQERFEKFKILNHTSITIQLYPCCPSVNHKTMAKCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGAAPRGWICPSCSAKVPRGDNAATPVRGLTTVGVHHTSSEGDVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEARLAEIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREESACHLVQVVAVKLGVKLDVRDIVHAERIGAVRRNFTEGDENRPRILSVRLARRSVRDALLKGARVRRNLSTTDLDVPGPVRTVYLNERLSAYNRKLFGTTRQKGKDKGWKFGEEGRAPCVSGYRLKHVPRPVSIRGGRGGGVAFYLRADISARVCMHPGHLDVEQLWITVNFCGKKLLIGTAYRPPWSDLENFLEGLTESIGAMAPYDNIVLLGDFNVNLLDCNCSRTKKINEFLSHFSLSQIVRTATHFMSGSSTLLDVICTDIGINDVGVDYIPELGHHAFVTCETLIRKERPMSRMITSRQFKNILEEFFTQDLNTIPWSNIALLDDVDTMVYTFSMFILYLYDLHAPHKTLKFKTRSTPWITDNVRLLFKLRDAARYRSHVTQVHSHKQYYLDLKKQAASVLASEKKTYYNNYINSNFGNPKKLWKNLKSDVIPSHQEKALPEHLNDANAINDAFLDVPGVCSSDVSGYSFFEYSNTSPKFTLKTVNQDTVLKIINSIKSNAQGTDGISGEMISLSLPSTLEAITSIINKSIDTNTFPAQWRCSVVSPIPKVTHPQAFKDLRPISVLPFLSKILEKVVYSQVAAYIESNNILPVLQSGFRKSRGTAAALTDIVGNILEARDRSQGTILTLLDFSRAFDTINTALLLAKLTHYGFSDNAVQWFSSYMSSRTQFVQIRKEDGTKLTSTSKPITRGVPQGSVLGPLLFILYSADITQCFKNCKYHVYADDVQLYHSFDVGDTPSAVSFINEDLQRIVSWSEQNSLVLNPSKSKYMILGSKSQIAKILSLDPKVTVSGKEIDRVELACSLGLTIDPELRFEAHITKNLRTCFYRLKILYSFRQYLNNEYKNKRLWYLANQFILTPEKESNYFTMSAELAFQVHTLEVRLTRHQDLSGPRYKILLEYLDKHPLLKEYNRSKNYYGIK

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
6AR3     E-value=0.00309909,     Score=102

Ontologies

KEGG
101743528    no KO assigned | (RefSeq) coiled-coil domain-containing protein lobo
GO
GO:0005515   GO:0008270   GO:0006164   GO:0004180   GO:0003676   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

Topology

Length:
1767
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
8.14944999999997
Exp number, first 60 AAs:
8.0658
Total prob of N-in:
0.35494
outside
1  -  1767
 
 

Population Genetic Test Statistics

Pi
329.98324
Theta
172.940144
Tajima's D
3.251634
CLR
0.393307
CSRT
0.987300634968252
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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