Gene

KWMTBOMO15054

Annotation

PREDICTED:_SAYSvFN_domain-containing_protein_1_[Amyelois_transitella]

Location

Bomo_Chr25(-):3548958-3550327      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.264 Nuclear   Reliability : 1.27 PlasmaMembrane   Reliability : 1.121

CDS

ATGGAGGCAAAATTAAAGGAATATCGGGCCTTAAGACGCCGAAAAGAATTGGTAGAAAATACGAAAGAAAAGATAAGAAAGTCGAGAGATAAAATTGTCAACTTTCTGATACCACAAGTTTTTTTAGACATGACCAAAGATAGAAGCGAAGAAGAGGTTCTGCTCATTGAAAATGAAGAACAAATACCTCAGAAATTCCAACCTCTACAAACTGAAGACCCGAGTGATATAACTTCAGAAGCAAGTGAACTGGAATCCTTAGAAGATGAGCCGAAAGAATCTTGGCAATATTTTGCAATTAAATGGTCAATCGGCTCTATTATCTGGTTATCTTTGTACATGTACTTCTTACAGATACAGTTTGGTGCTGTATTTTTTGTAGTATCTGTTTTAATAGGTATTTGCGTTAACACTAGGACAACGCCTAAAAAGCGGGGTGAAGTTTCAGCATACAGTGTTTTCAATGAAAACTGTGTGAGTATAGATGGCACGTTGAAAGCTGAGCAATTCGAAAAAGAAATACGATATGGAGCTGGTACAGTACGGTAA

Protein

MEAKLKEYRALRRRKELVENTKEKIRKSRDKIVNFLIPQVFLDMTKDRSEEEVLLIENEEQIPQKFQPLQTEDPSDITSEASELESLEDEPKESWQYFAIKWSIGSIIWLSLYMYFLQIQFGAVFFVVSVLIGICVNTRTTPKKRGEVSAYSVFNENCVSIDGTLKAEQFEKEIRYGAGTVR

Uniprot

A0A3S2NLG5   S4PEH9   A0A212ETH8   A0A2A4JXF7   A0A0L7KGR0   A0A2W1BS01   + More
A0A2H1X2F9   A0A0N1IP58   A0A1E1WL57   I4DLK4   A0A194PM46   B4IJI1   B4QUD2   B4PUB6   Q9VBW0   Q4QQ08   B3P6Q0   A0A1Y1KXB0   A0A1W4VM12   A0A2P8YPC9   K7IUM9   B3M282   A0A232EDZ4   A0A1J1HLL0   A0A067RDX9   A0A1B6DY18   A0A1B6MAL2   Q297G5   A0A0A1WL49   A0A0L7QTL4   A0A1L8D9L0   A0A1L8D9N5   A0A1B0FV46   A0A0L0BQR5   A0A1B6JF81   A0A1B0GJC9   A0A0T6B6H3   A0A1B0DFT2   A0A1B0D3C8   A0A1I8P937   U4UGY6   N6T3E2   Q17MC2   A0A182QTL5   A0A182P3Z5   A0A182NCH9   A0A182RRR6   U5ETK4   A0A023EL55   A0A182YG47   A0A182KXU3   Q7QAJ6   A0A182W118   A0A182U5W0   Q7QKP9   A0A182URX3   A0A182I965  

Pubmed

23622113    22118469    26227816    28756777    26354079    22651552    + More
17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28004739    29403074    20075255    28648823    24845553    15632085    25830018    26108605    23537049    17510324    24945155    25244985    20966253    12364791    14747013    17210077    9087549   

EMBL

RSAL01000008    RVE53930.1    GAIX01004502    JAA88058.1    AGBW02012595    OWR44751.1    + More
NWSH01000485    PCG76072.1    JTDY01009951    KOB62104.1    KZ149918    PZC77828.1    ODYU01012915    SOQ59457.1    KQ460594    KPJ13938.1    GDQN01003349    JAT87705.1    AK402172    BAM18794.1    KQ459604    KPI92185.1    CH480848    EDW51172.1    CM000364    EDX14369.1    CM000160    EDW98803.1    AE014297    AAF56417.1    BT023608    AAY85008.1    CH954182    EDV53720.1    GEZM01075039    GEZM01075038    JAV64325.1    PYGN01000452    PSN46118.1    AAZX01006018    CH902617    EDV42273.1    NNAY01005719    OXU16579.1    CVRI01000010    CRK88943.1    KK852526    KDR22066.1    GEDC01021381    GEDC01006728    JAS15917.1    JAS30570.1    GEBQ01007004    JAT32973.1    CM000070    EAL28240.1    GBXI01014700    JAC99591.1    KQ414741    KOC61965.1    GFDF01010933    JAV03151.1    GFDF01010932    JAV03152.1    AJWK01010365    JRES01001513    KNC22338.1    GECU01009902    JAS97804.1    AJWK01020158    LJIG01009496    KRT82964.1    AJVK01058980    AJVK01023436    KB632319    ERL92292.1    APGK01045628    KB741037    ENN74664.1    CH477207    EAT47827.1    AXCN02001187    GANO01002739    JAB57132.1    GAPW01004639    JAC08959.1    AAAB01008888    EAA08826.4    AAAB01008680    EAA03470.4    APCN01003211   

Proteomes

UP000283053    UP000007151    UP000218220    UP000037510    UP000053240    UP000053268    + More
UP000001292    UP000000304    UP000002282    UP000000803    UP000008711    UP000192221    UP000245037    UP000002358    UP000007801    UP000215335    UP000183832    UP000027135    UP000001819    UP000053825    UP000092461    UP000037069    UP000092462    UP000095300    UP000030742    UP000019118    UP000008820    UP000075886    UP000075885    UP000075884    UP000075900    UP000076408    UP000075882    UP000007062    UP000075920    UP000075902    UP000075903    UP000075840   

PRIDE

Q9VBW0    Q4QQ08   

Pfam

PF10260   SAYSvFN

Interpro

IPR039159   SAYSD1        + More
IPR019387   Uncharacterised_SAYSvFN       

ProteinModelPortal

A0A3S2NLG5   S4PEH9   A0A212ETH8   A0A2A4JXF7   A0A0L7KGR0   A0A2W1BS01   + More
A0A2H1X2F9   A0A0N1IP58   A0A1E1WL57   I4DLK4   A0A194PM46   B4IJI1   B4QUD2   B4PUB6   Q9VBW0   Q4QQ08   B3P6Q0   A0A1Y1KXB0   A0A1W4VM12   A0A2P8YPC9   K7IUM9   B3M282   A0A232EDZ4   A0A1J1HLL0   A0A067RDX9   A0A1B6DY18   A0A1B6MAL2   Q297G5   A0A0A1WL49   A0A0L7QTL4   A0A1L8D9L0   A0A1L8D9N5   A0A1B0FV46   A0A0L0BQR5   A0A1B6JF81   A0A1B0GJC9   A0A0T6B6H3   A0A1B0DFT2   A0A1B0D3C8   A0A1I8P937   U4UGY6   N6T3E2   Q17MC2   A0A182QTL5   A0A182P3Z5   A0A182NCH9   A0A182RRR6   U5ETK4   A0A023EL55   A0A182YG47   A0A182KXU3   Q7QAJ6   A0A182W118   A0A182U5W0   Q7QKP9   A0A182URX3   A0A182I965  

KEGG

101743667    no KO assigned | (RefSeq) SAYSvFN domain-containing protein 1

GO

GO:0016021  

PANTHER

PTHR13527  

Length:

182

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

25.35087

Exp number, first 60 AAs:

0.00427

Total prob of N-in:

0.21459

outside

1  -  113

TMhelix

114  -  136

inside

137  -  182

 

 

Pi

308.570754

Theta

236.163717

Tajima's D

0.940674

CLR

0.618144

CSRT

0.645117744112794

Interpretation

Uncertain