Gene

KWMTBOMO15053

Pre Gene Modal

BGIBMGA004814

Annotation

PREDICTED:_transmembrane_protein_8A_[Bombyx_mori]

Location

Bomo_Chr25(+):3531588-3543132      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.834

CDS

ATGCGGTTCCTATACTGTTTATTGTTGTATACAATCACAGTAGTGATAAGTGTGGACCACGAAGCCGAAGAGGAAAGCAACAGGAGGAGGATAATCGATCAGCTGACGAGGACTAAAACGGTGCTATTAGATGATTACCACTTGGTAACAAGACATATTGCAACAGAAGTAAATATGTATAGGAATTATCGTACAGTTTCTGTGCTTTTCTATTCTATGAATATTGATTTAACGTACGCTCAATTCACATTTCAATCAGAAGAGCTTCATCTAAATAACATAGGATCGTGCAGTCCGCAAGAAGTGTTGATCAAATTAAAACATGGATCGTATCCTGCAGTTAATCCCGACGGTTACGATTTCCCGAAGGATTTCATAGAACCAAGTCTGAGGGAAGAGGTTCACACCATAGACATACTATCGGATGGTAGAAACAGGACTTACACGATAAGGTATCCCAAGCCTGGGAGCTGGTACGCTCTTGTGTACATAAAATGGGAAGATCCGAGGAAGCAAAAAGTAGAACAGGAAGGTCTAGTAGCAGATTGTCGAACGATATTGTACACCGATTTACAAGTAAAAGAAGAAGAGAAAATACGATTTGTAGATTGCTACAGCGGTTTTAATTTGGACCAAAAAGACATGCCGGCCACATTGAAATGCATGGCCACAGATAAGCCCGATCCGATCTCGTTAAATATCACGTTTCTCGACATTGATACGTCTGCAGACACCTACGTGACATTAAGGCTGCAGTCATTGTCATTGCCGTCCGACGATAATTACATAATATATTGTATTTATGATCCGAAAATAAACAATATACTTTCGGTAACGTTTACGCCCAATCCGAACGCGTGGCACTACATCCGAGTAGACCAGACTAGGGAAAACGTAACAATGGTAGCGAATTGCGAATCGTATCAACGGACAGATCTAAGTGACGCCGAAAATTTAACGATTCTCGACCTTATGCGCGACGACAAAGGAAGGTTCTTCACGTTCGACTACGGTCTCCCGACGACAGACTTGCAGGACGCTACCAGCGTCCTAAACGTGACCTCATCCGAAATCAAAAGTATGCGATTTAAAGTGAATCAGTTTCTGGATATCGGCGGCAGTCTCTCGATCGAGGCTAGCCTGCTGATGAGCCTGAAGTACTACATGGGTAATTACAAGAGAGAATCGACGAAGGGGGACTTATTGGAATTCACCGAAGACAATCAGTTTATGAAAGCAGTAATCTGTTTGAACGTTGGTCATGCTAGCGTGCCTTTGGAGAGCGGACATTGCAAATACAACGACCGGGTCACACCGGCGCTTTTCGTGTTGAATAGCACCGATTCCGAATCGGTGTACTCGAAGTCTATAATACCGTTTCCCGAGAGCGGCACTTGGTATCTAACGTTTCGGCTGTTCTGCGACTCGACCGTCTGTCCTTGTCCCACTTCGGAGGACGGAACGAAATATTATGTGAATTCGAGCGGGATAACAGATGTCGGTCTGTCCAGCAACAAAACTAGACAGGGCTCTTCGGAGTGCAACGCGAGTGTGGTGGTGGCCTTGTCGTCGAGTTCGTGCGTGGGCGGGAGCTGTAGCAACCACGGGAACTGCCTCCTGAATACCTTTGGAGGGATGGTCATGTCCTTTTGTTCGTGCTCTGCAGGATATGGAGGTTGGGATTGTTCGGACGATTCAAGAATGGACAGCCGAGCGTATATGCTACTTTCGATCCTGCTGCTCACGCTAAGCAATCTCGTATTCTTTTTCTCGATATACGTGGCGACAATACGTTTCTACTACACCGAAGCCATGATGTACGCCTTCACGATGTTGTTCTCGACGTTCTACCACGCTTGCGACGCGCCCTCCCAGGTAGCCTACTGCATCATCAGAGGCAATATCCTTCAGTTCGGCGATTTTTACTGCGGCCTCATGTCGTTCTGGGTGACGCTACTGGCTATGAGCATCGTCAGTGACGAATTAAGGTCCTTCTGTCAGCTGACCGGAGCTATTGTCGTGGCCTTGTTCACGACCTGGAACATGCATTCGTTCGTATCGTTTCTCCTGCCCGTGGCGATAGGAGCGACCGTGCTGTTGGTCTCTTGGTATCTCGATTACAGGAAGACCGGTATAATGAGATACCCGTGGTCTTATTACTCGAAGTACATGCCGATCGGTATAATTCTGGTCAGCACCGGTCTGATATGTTACGCGTTTCTACAGACCGAACAGAATTACAAAATCGTTCATTCGATTTGGCACATGATAATAGCGTTTAGCGTTGTGTTTCTGTTGCCCGATGTGAAACGGGGCCCGAATGCGAACCCCTTCCTACCGACACCGAGTTATTATACGGGTAAGTTTTCTAGATACTTCCGCAGATCTCGCACGCCCATTGCCGAATGA

Protein

MRFLYCLLLYTITVVISVDHEAEEESNRRRIIDQLTRTKTVLLDDYHLVTRHIATEVNMYRNYRTVSVLFYSMNIDLTYAQFTFQSEELHLNNIGSCSPQEVLIKLKHGSYPAVNPDGYDFPKDFIEPSLREEVHTIDILSDGRNRTYTIRYPKPGSWYALVYIKWEDPRKQKVEQEGLVADCRTILYTDLQVKEEEKIRFVDCYSGFNLDQKDMPATLKCMATDKPDPISLNITFLDIDTSADTYVTLRLQSLSLPSDDNYIIYCIYDPKINNILSVTFTPNPNAWHYIRVDQTRENVTMVANCESYQRTDLSDAENLTILDLMRDDKGRFFTFDYGLPTTDLQDATSVLNVTSSEIKSMRFKVNQFLDIGGSLSIEASLLMSLKYYMGNYKRESTKGDLLEFTEDNQFMKAVICLNVGHASVPLESGHCKYNDRVTPALFVLNSTDSESVYSKSIIPFPESGTWYLTFRLFCDSTVCPCPTSEDGTKYYVNSSGITDVGLSSNKTRQGSSECNASVVVALSSSSCVGGSCSNHGNCLLNTFGGMVMSFCSCSAGYGGWDCSDDSRMDSRAYMLLSILLLTLSNLVFFFSIYVATIRFYYTEAMMYAFTMLFSTFYHACDAPSQVAYCIIRGNILQFGDFYCGLMSFWVTLLAMSIVSDELRSFCQLTGAIVVALFTTWNMHSFVSFLLPVAIGATVLLVSWYLDYRKTGIMRYPWSYYSKYMPIGIILVSTGLICYAFLQTEQNYKIVHSIWHMIIAFSVVFLLPDVKRGPNANPFLPTPSYYTGKFSRYFRRSRTPIAE

Uniprot

H9J5M4   A0A2A4JX45   A0A1E1VXU9   A0A2W1BXA0   A0A0N1PI20   A0A194PHJ0   + More
A0A2H1WT40   A0A212ETD8   K7IQD6   B0X6P2   A0A2A3EQ67   E9IBG8   A0A0C9QQ78   A0A195EFB5   A0A154P4H7   A0A195C8S0   A0A0L7QTK9   F4WG19   A0A158NTG7   A0A0M8ZVU1   A0A151JWF7   D6WPY8   A0A026W8H2   A0A195BH79   A0A1W4WWC0   A0A2P8Z8K6   E2AI30   A0A067RJM9   A0A2J7R4S0   A0A1Y1KUE1   E2BBK0   T1GH31   A0A087T5G0   A0A0P4W6E8   A0A0P4W1T3   R7VLX5   A0A2P6KNR9   A0A2I4CWE9   A0A147A6J8   A0A3Q3F377  

Pubmed

19121390    28756777    26354079    22118469    20075255    21282665    + More
21719571    21347285    18362917    19820115    24508170    30249741    29403074    20798317    24845553    28004739    23254933   

EMBL

BABH01025054    NWSH01000485    PCG76073.1    GDQN01011553    GDQN01005826    JAT79501.1    + More
JAT85228.1    KZ149918    PZC77827.1    KQ460594    KPJ13939.1    KQ459604    KPI92184.1    ODYU01010860    SOQ56221.1    AGBW02012595    OWR44750.1    DS232420    EDS41525.1    KZ288194    PBC33847.1    GL762111    EFZ22025.1    GBYB01002787    JAG72554.1    KQ978957    KYN26970.1    KQ434809    KZC06224.1    KQ978205    KYM96513.1    KQ414741    KOC61960.1    GL888128    EGI66786.1    ADTU01025893    KQ435848    KOX71056.1    KQ981639    KYN38692.1    KQ971354    EFA06895.2    KK107341    QOIP01000012    EZA52402.1    RLU16249.1    KQ976488    KYM83583.1    PYGN01000147    PSN52826.1    GL439621    EFN66938.1    KK852590    KDR20728.1    NEVH01007402    PNF35830.1    GEZM01073546    JAV65013.1    GL447114    EFN86930.1    CAQQ02189636    KK113503    KFM60349.1    GDRN01079633    GDRN01079632    JAI62364.1    GDRN01079635    JAI62362.1    AMQN01016525    KB292164    ELU18005.1    MWRG01007947    PRD27972.1    GCES01012170    JAR74153.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000002358    + More
UP000002320    UP000242457    UP000078492    UP000076502    UP000078542    UP000053825    UP000007755    UP000005205    UP000053105    UP000078541    UP000007266    UP000053097    UP000279307    UP000078540    UP000192223    UP000245037    UP000000311    UP000027135    UP000235965    UP000008237    UP000015102    UP000054359    UP000014760    UP000192220    UP000265000    UP000264800   

PRIDE

H9J5M4   

Pfam

PF12036   DUF3522

Interpro

IPR013032   EGF-like_CS        + More
IPR000742   EGF-like_dom       
IPR021910   NGX6/PGAP6/MYMK       

ProteinModelPortal

H9J5M4   A0A2A4JX45   A0A1E1VXU9   A0A2W1BXA0   A0A0N1PI20   A0A194PHJ0   + More
A0A2H1WT40   A0A212ETD8   K7IQD6   B0X6P2   A0A2A3EQ67   E9IBG8   A0A0C9QQ78   A0A195EFB5   A0A154P4H7   A0A195C8S0   A0A0L7QTK9   F4WG19   A0A158NTG7   A0A0M8ZVU1   A0A151JWF7   D6WPY8   A0A026W8H2   A0A195BH79   A0A1W4WWC0   A0A2P8Z8K6   E2AI30   A0A067RJM9   A0A2J7R4S0   A0A1Y1KUE1   E2BBK0   T1GH31   A0A087T5G0   A0A0P4W6E8   A0A0P4W1T3   R7VLX5   A0A2P6KNR9   A0A2I4CWE9   A0A147A6J8   A0A3Q3F377  

KEGG

101739294    no KO assigned | (RefSeq) transmembrane protein 8A

GO

GO:0016021   GO:0005886   GO:0005515   GO:0003676   GO:0006164   GO:0004180   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

PANTHER

PTHR14319  

SignalP

Position:   1 - 17,         Likelihood:  0.914907

 

 

Length:

802

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

133.11215

Exp number, first 60 AAs:

0.07208

Total prob of N-in:

0.01659

outside

1  -  574

TMhelix

575  -  597

inside

598  -  640

TMhelix

641  -  658

outside

659  -  682

TMhelix

683  -  705

inside

706  -  716

TMhelix

717  -  739

outside

740  -  748

TMhelix

749  -  766

inside

767  -  802

 

 

Pi

231.338212

Theta

179.546706

Tajima's D

0.8319

CLR

0.055513

CSRT

0.609669516524174

Interpretation

Uncertain