Silkworm Genome Informatics Database

Gene

KWMTBOMO15052

Pre Gene Modal

BGIBMGA009860

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr25(+):3516758-3524363 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.08

CDS

ATGGAATCTCAACGTGCTGCAGCAGGTCGAGGCAGAAGTGGTCGTGCTGGCGGTCAACGTGTTCGTGGTCATCACCAAGCCCGACCTTCGGCCTCTGAATCACTCGTCACTATGCCAATCGAGGCGTTGCCGGCGGGTCGAGCGATGGAGACGCCGATGCACCCGAAGAGGGTAAGGGTGCTCGAGCCCGTAGTGGAAAACCCTAGATCAGAAATGTGGGGATCCAACGCTTCGTCCCCAGCCAGGAGGGACCAGGAGACGCCTCCGGTGCCATCACCTGCCCTATACGTAGAATGTGGGCCTAGCAGCGGGGCAAGCACGCCGACCACCGAGCGGCCTGCAAGTCTGAGTCACGTCTCAAAGGAAGCTCGGCGTGAATTAATCCCTTCGTCCTCTTCGTCCACTCGACCTCTTCGCGACGAAGAGATTTTGACATTGCTCAATTACGGCAGCGAAGAAGAGTCGGAGGAAGAGGAGGACGAAGAGACTATGCAGCGGCTGACGGTGCCGCACTCGACCAGGATGTGGTTAGACGAAGAGGATGAGGAAGTTGAAAGAGGTGAAGAGAGGATCCCTCCTCTCCCGAGAGATAACATTAATATAGAGCAACCTCCTCAACCTCTTCGTCTATCCACATCCACCTCACCGACGGCTCTTTCGCCCTCTGTGGCGCTAGGGCCAACTAATAAATTTATGTTTGAATGGAGAACGGCGCCAATGCCTGCAATCGAACCTGATTTAAGGCGAGAACCGTTCTCCCAAATTAGTGGTCCAAAGGTTTCTTTCGCGACTCCGTATGATGCATTCATTGCCATATGGGATCGTGAAATAATGGAATCGATAGTCGAGGAAACCAACATTTACGCACAGCAGCTGGCAACGGTCATGCTGGAGACTGGGACGATCCGCCCTCATAGCTGGATTACTCGATGGCAAGATACGGATGTAAACGAACTTTACACGTATTTTGCTATCATTCTGGCTATGGGGGTGTTCATCAAAAGCTGCCTGACCGAGTATTGGTGCACGGCACAAGACGTATTTTATACACCAGGCTTCTCCGCCCAAATGTCGTATGACCGTTTCCGGCTGCTGTCAAGGTGCCTACACTTTTCTAATAACACTGCTTGTGATCTTGCAATGTTGACACGACGCCAGGTCATGCTGTACAAAATACAACCGTTAATAGACCACTTAAATAAAAAATTTGCGGAACTTTACAATTTGGGTCAAAATTTAGCAGTGGATGAAAGTTTGACGATGTGGAAAGGCTGGCTTGATATAAACCAGTTCATTCCACAAAAGGCAGCGACAGTTGGGATCAAAACTTATGAAGTTTGTGAATCGCAGAGTGGTTACCTGTGGCGGTTTGAAGTTCACGCTGGCCATGACATCTCGGCTTCACAGGACGATCCAATTTCTGGCACAGTACCAGCTCTCGTGCTCAGACTTTTAAATGGTCTTGAGCATAAAGGGCACACAATATGGATGGATAATTTTTATAACTCTCCAGCGCTAGCCCGAGAACTTAAGACACGCGGCTTTGACTGTGTGGGCACACTGCGGACTAACCGACAATTTGTGCCGTACGAAGTGACGTCCCTTACAAAAAGGGATATGACAGTCGGTCAAGTGATGGGATGCACCTCGGGAGATGTGGATATTTTGGTGTGGAAAGATAAAGGCCGGGTGGCATTTATTTCCACATACCATGGTCTTGCATCTGTTACGTTTGAGGAAAGACTGAAGCCGACTGTCGCGTACGATTATAATATTTGTATGGGCGGAGTAGACCGCAAGGACCAGCAGCTTGCAGTGTATCCCATAGAAAGAAGAAGGACAAAAGTTTGGTACAAGAGATTCTTTAGAAGGCTCTTGAACGCTAGTGTCTTGAACTCGCACATACTACACCAAAATCAGTCATTCTCACACCGGAAATTCCGGACGGTGTTAATCACTGAACTATTGAGTGCACACCGTACACAACCACCTAGCACACTCACCCCAACACATGTACATTGCCCGGCGCAGTATGGCCTGACCAAGAGCGGTAAATCAGACCGCCTTAGGCGCCAGTGTGCCGTCTGCTCCAGGCGGACTCACACATATTGCAAGGCCTGCAACGTGGCAATGTGCATTTTCACTTGCTACGAGACATACCACACTACACATCGACACTTTACCGCCACCTCAGTACCATGTGAGAGGATTTTTTCAAAATCTGGTAAACTCATTTCTGACCGACGTAACAGGCTTTCGGTAGAAAAAGTAAAAAAGCTGATGTTTTTATGCACCAATAAGAAATAA

Protein

MESQRAAAGRGRSGRAGGQRVRGHHQARPSASESLVTMPIEALPAGRAMETPMHPKRVRVLEPVVENPRSEMWGSNASSPARRDQETPPVPSPALYVECGPSSGASTPTTERPASLSHVSKEARRELIPSSSSSTRPLRDEEILTLLNYGSEEESEEEEDEETMQRLTVPHSTRMWLDEEDEEVERGEERIPPLPRDNINIEQPPQPLRLSTSTSPTALSPSVALGPTNKFMFEWRTAPMPAIEPDLRREPFSQISGPKVSFATPYDAFIAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHSWITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTRRQVMLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVGIKTYEVCESQSGYLWRFEVHAGHDISASQDDPISGTVPALVLRLLNGLEHKGHTIWMDNFYNSPALARELKTRGFDCVGTLRTNRQFVPYEVTSLTKRDMTVGQVMGCTSGDVDILVWKDKGRVAFISTYHGLASVTFEERLKPTVAYDYNICMGGVDRKDQQLAVYPIERRRTKVWYKRFFRRLLNASVLNSHILHQNQSFSHRKFRTVLITELLSAHRTQPPSTLTPTHVHCPAQYGLTKSGKSDRLRRQCAVCSRRTHTYCKACNVAMCIFTCYETYHTTHRHFTATSVPCERIFSKSGKLISDRRNRLSVEKVKKLMFLCTNKK

Uniprot

A0A194RRT0 A0A3S2TBD2 A0A3S2PA36

Pubmed

26354079

EMBL

KQ459989 KPJ18766.1 RSAL01001012 RVE40990.1 RSAL01000155 RVE45659.1 + More

Proteomes

UP000053240 UP000283053

Pfam

PF13843 DDE_Tnp_1_7

Interpro

IPR029526 PGBD

ProteinModelPortal

A0A194RRT0 A0A3S2TBD2 A0A3S2PA36

KEGG

101739439 no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0046983 GO:0003676 GO:0006164 GO:0004180 GO:0005515 GO:0007154 GO:0016020 GO:0005112 GO:0015930

Length:

768

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.38524000000001

Exp number, first 60 AAs:

0.00079

Total prob of N-in:

0.10427

outside

1 - 768

Pi

196.004866

Theta

190.574965

Tajima's D

1.431618

CLR

0.560114

CSRT

0.773961301934903

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree