Gene

KWMTBOMO15046

Pre Gene Modal

BGIBMGA004810

Annotation

PREDICTED:_N-acetylneuraminate_lyase-like_[Amyelois_transitella]

Location

Bomo_Chr25(+):3443268-3449303      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.021 Mitochondrial   Reliability : 1.001

CDS

ATGGCATCCAACATCGAAGGAATTTTGGCACCGGTGTTCACTCCGATGTACGAAGACGGCGAAGTTAACTATTCTGTGATAGCGGATTATTTGAGTTTTCTAAAACGGAAGAACATAAACGGTATCCTAGTTGGTGGTACCACCGGAGAAACAGCATCTCTGAGCTTGCAAGAACGGAAAGACGTACTCAACGCTTGGCTACAGAGCGCAAGAAGGCACAAAATCAAGGTCATCGCACAGATCGGCGGAATACCTCTACCTGATGTCATTGAAATGGCACAATTCGCTGAAGATGTGGAGGTCGACGCCATCATGACTCTACCAGAACTTTACTACAAGCCCCGAAACGTAGAGCAGCTGGTCTCCTATTTAGAGACGGTATCTAAGGCGGCACCTACACTACCTTTAATCTACTACCACTTTCCTATGATGAGTGGCGTGGACTTGAACATGAAAAGGTTCTTTGCACTGGCTTCATCGAGGATTCCAAATTTCATGGGAATGAAAGCGGATTTAAACGTTGCTGTACAAGTCGCTGATTTGCTTGCAACCGATCAGAAAATATTCATGGCTAATCACCATTTAGCGGAAGCGGCACTAATGGGACACGAATCTAGTATTGCAACGGTTACAAACATGTTCCCGGAATTAGTACAAACTATTGTGAATGCCGTGAGCACTGGCGACGTGAACACTGCAAGGAAACTACAGGAGACCCTTAATCGGGCAGTTGATAACATTACTGAACAAGGTGAATTCCTGCCCTGCATGAAATCAGCCATGCCGATGATCACTGGAATCCAAGTGGGCCCGCCGAGACGGCCGCTTTTCGCTGTAGATGAGACAACGAAGAAAAACATAGAAGACAGATTGAAAGCCATAAAGATAATTTTCTGA

Protein

MASNIEGILAPVFTPMYEDGEVNYSVIADYLSFLKRKNINGILVGGTTGETASLSLQERKDVLNAWLQSARRHKIKVIAQIGGIPLPDVIEMAQFAEDVEVDAIMTLPELYYKPRNVEQLVSYLETVSKAAPTLPLIYYHFPMMSGVDLNMKRFFALASSRIPNFMGMKADLNVAVQVADLLATDQKIFMANHHLAEAALMGHESSIATVTNMFPELVQTIVNAVSTGDVNTARKLQETLNRAVDNITEQGEFLPCMKSAMPMITGIQVGPPRRPLFAVDETTKKNIEDRLKAIKIIF

Similarity

Belongs to the DapA family.

Uniprot

H9J5M0   A0A2A4JEY1   A0A2H1W3A5   A0A3S2L1T7   A0A2W1BRW0   A0A212ETD9   + More
I4DPJ4   A0A194PFM7   A0A0N0PCS5   A0A3S2NC89   A0A2A4JFY8   A0A2A4JFM5   E2BFR7   A0A158P438   E2AJ86   A0A195FJA2   A0A151WF36   E9IK31   F4X1Y9   H9J5R9   A0A151IUE1   A0A232FEM4   K7IMV4   A0A336M102   A0A158P437   A0A195FJP7   J3JYH0   A0A023F7H9   R4FL94   F4X1Z0   A0A151JBW8   A0A0C9RWH4   D6WME9   A0A1B6DZ58   A0A151WF58   A0A1S4FMA1   A0A087ZVV2   Q16WA2   A0A1Y1KKF9   A0A1Y1KGM9   A0A1Y1KH54   A0A182JTV7   A0A182M3E0   A0A2A3EF84   A0A336KD48   A0A1L8DCV7   A0A1Y1KN37   A0A182WIY3   A0A182JMC6   A0A182PA02   A0A232EGK8   Q7PTG5   A0A224XHH7   A0A182VFB3   A0A182X6K7   A0A182KS08   A0A1B6IYA4   R4WNH6   A0A182I3V6   A0A0N0BGL6   A0A182TEK1   A0A0K8SKB8   K7J245   A0A0A9Z1Y6   A0A182T0U9   A0A182GZ29   T1DNX9   A0A084VF66   A0A182RB21   A0A1B6LID4   A0A182QP80   A0A1Q3FDN6   A0A336M1U9   A0A0P4VHC9   A0A0C9QMI7   A0A067RJQ4   E0VUC4   A0A1Y1KBI2   A0A1B0CHZ1   A0A2J7QQ19   B0VZR3   A0A182FG30   N6UI15   A0A182NHC9   A0A1S3KF98   A0A1S3KG04   A0A1B6I5W9   W5JKQ9   A0A2J7QPZ4   A0A026WBS3   A0A154PSC7   K7IMV5   A0A0L7L8A9   A0A1W4X969   A0A1W4X7X0   A0A195CNB7   A0A310SPK1   A0A2R7WW08   N6TWK1  

Pubmed

19121390    28756777    22118469    22651552    26354079    20798317    + More
21347285    21282665    21719571    28648823    20075255    22516182    25474469    18362917    19820115    17510324    28004739    12364791    14747013    17210077    20966253    23691247    26823975    25401762    26483478    24438588    27129103    24845553    20566863    23537049    20920257    23761445    24508170    26227816   

EMBL

BABH01025066    NWSH01001636    PCG70617.1    ODYU01006029    SOQ47513.1    RSAL01000235    + More
RVE43726.1    KZ149918    PZC77822.1    AGBW02012595    OWR44747.1    AK403635    BAM19834.1    KQ459604    KPI92181.1    KQ460594    KPJ13942.1    RVE43727.1    PCG70618.1    PCG70619.1    GL448039    EFN85455.1    ADTU01008424    GL439967    EFN66526.1    KQ981523    KYN40483.1    KQ983227    KYQ46426.1    GL763924    EFZ18997.1    GL888558    EGI59525.1    BABH01025065    KQ980964    KYN11012.1    NNAY01000352    OXU28970.1    UFQT01000393    SSX23925.1    KYN40482.1    BT128298    AEE63256.1    GBBI01001520    JAC17192.1    GAHY01001523    JAA75987.1    EGI59526.1    KQ979110    KYN22602.1    GBYB01013345    JAG83112.1    KQ971343    EFA04261.2    GEDC01006332    GEDC01003561    JAS30966.1    JAS33737.1    KYQ46425.1    CH477572    EAT38848.1    GEZM01081089    JAV61892.1    GEZM01087347    JAV58745.1    GEZM01087346    JAV58746.1    AXCM01001459    KZ288262    PBC30397.1    UFQS01000285    UFQT01000285    SSX02419.1    SSX22794.1    GFDF01009887    JAV04197.1    GEZM01081090    JAV61891.1    NNAY01004742    OXU17487.1    AAAB01008807    EAA03961.4    GFTR01004480    JAW11946.1    GECU01015785    JAS91921.1    AK417186    BAN20401.1    APCN01000225    KQ435775    KOX74992.1    GBRD01012074    GBRD01012073    GDHC01015486    JAG53751.1    JAQ03143.1    GBHO01005141    GBHO01005140    GDHC01021560    JAG38463.1    JAG38464.1    JAP97068.1    JXUM01098550    KQ564429    KXJ72292.1    GAMD01002465    JAA99125.1    ATLV01012362    KE524785    KFB36610.1    GEBQ01016525    JAT23452.1    AXCN02000896    GFDL01009354    JAV25691.1    SSX22803.1    GDKW01002751    JAI53844.1    GBYB01004719    JAG74486.1    KK852639    KDR19640.1    DS235785    EEB16980.1    GEZM01087348    JAV58744.1    AJWK01012915    AJWK01012916    NEVH01012087    PNF30663.1    DS231815    EDS35155.1    APGK01035366    APGK01035367    KB740923    ENN78297.1    GECU01025380    JAS82326.1    ADMH02001258    ETN63359.1    PNF30658.1    KK107293    EZA53418.1    KQ435100    KZC14657.1    JTDY01002387    KOB71521.1    KQ977513    KYN02246.1    KQ760538    OAD59997.1    KK855746    PTY23732.1    APGK01058332    KB741288    ENN70677.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000053240    + More
UP000008237    UP000005205    UP000000311    UP000078541    UP000075809    UP000007755    UP000078492    UP000215335    UP000002358    UP000007266    UP000005203    UP000008820    UP000075881    UP000075883    UP000242457    UP000075920    UP000075880    UP000075885    UP000007062    UP000075903    UP000076407    UP000075882    UP000075840    UP000053105    UP000075902    UP000075901    UP000069940    UP000249989    UP000030765    UP000075900    UP000075886    UP000027135    UP000009046    UP000092461    UP000235965    UP000002320    UP000069272    UP000019118    UP000075884    UP000085678    UP000000673    UP000053097    UP000076502    UP000037510    UP000192223    UP000078542   

PRIDE

H9J5M0    H9J5R9    A0A087ZVV2   

Pfam

PF00701   DHDPS        + More
PF03101   FAR1
PF09774   Cid2

Interpro

IPR002220   DapA-like        + More
IPR013785   Aldolase_TIM       
IPR020624   Schiff_base-form_aldolases_CS       
IPR020625   Schiff_base-form_aldolases_AS       
IPR004330   FAR1_DNA_bnd_dom       
IPR019171   Caffeine_induced_death_Cid2       

Gene 3D

3.20.20.70    

ProteinModelPortal

H9J5M0   A0A2A4JEY1   A0A2H1W3A5   A0A3S2L1T7   A0A2W1BRW0   A0A212ETD9   + More
I4DPJ4   A0A194PFM7   A0A0N0PCS5   A0A3S2NC89   A0A2A4JFY8   A0A2A4JFM5   E2BFR7   A0A158P438   E2AJ86   A0A195FJA2   A0A151WF36   E9IK31   F4X1Y9   H9J5R9   A0A151IUE1   A0A232FEM4   K7IMV4   A0A336M102   A0A158P437   A0A195FJP7   J3JYH0   A0A023F7H9   R4FL94   F4X1Z0   A0A151JBW8   A0A0C9RWH4   D6WME9   A0A1B6DZ58   A0A151WF58   A0A1S4FMA1   A0A087ZVV2   Q16WA2   A0A1Y1KKF9   A0A1Y1KGM9   A0A1Y1KH54   A0A182JTV7   A0A182M3E0   A0A2A3EF84   A0A336KD48   A0A1L8DCV7   A0A1Y1KN37   A0A182WIY3   A0A182JMC6   A0A182PA02   A0A232EGK8   Q7PTG5   A0A224XHH7   A0A182VFB3   A0A182X6K7   A0A182KS08   A0A1B6IYA4   R4WNH6   A0A182I3V6   A0A0N0BGL6   A0A182TEK1   A0A0K8SKB8   K7J245   A0A0A9Z1Y6   A0A182T0U9   A0A182GZ29   T1DNX9   A0A084VF66   A0A182RB21   A0A1B6LID4   A0A182QP80   A0A1Q3FDN6   A0A336M1U9   A0A0P4VHC9   A0A0C9QMI7   A0A067RJQ4   E0VUC4   A0A1Y1KBI2   A0A1B0CHZ1   A0A2J7QQ19   B0VZR3   A0A182FG30   N6UI15   A0A182NHC9   A0A1S3KF98   A0A1S3KG04   A0A1B6I5W9   W5JKQ9   A0A2J7QPZ4   A0A026WBS3   A0A154PSC7   K7IMV5   A0A0L7L8A9   A0A1W4X969   A0A1W4X7X0   A0A195CNB7   A0A310SPK1   A0A2R7WW08   N6TWK1  

PDB

6ARH     E-value=7.04285e-39,     Score=402

KEGG

101744495    K01639 N-acetylneuraminate lyase [EC:4.1.3.3] | (RefSeq) N-acetylneuraminate lyase-like

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016829   GO:0008152   GO:0003824   GO:0004180   GO:0005515   GO:0003676   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

PANTHER

PTHR12128  

Length:

298

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07807

Exp number, first 60 AAs:

0.00551

Total prob of N-in:

0.01697

outside

1  -  298

 

 

Pi

323.085684

Theta

186.429028

Tajima's D

2.45786

CLR

0.209722

CSRT

0.942752862356882

Interpretation

Uncertain