Gene

KWMTBOMO15045  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004809

Annotation

PREDICTED:_N-acetylneuraminate_lyase-like_[Bombyx_mori]

Location

Bomo_Chr25(+):3428718-3440800      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.934

CDS

ATGTACTCGATATCTGGATTAACGTTTTTATGTGTTTTGATAATAAATGTGTTTGATACGAAATGCGAAGACTATGCCGAGTTCAACCAAAAAGGTGTCTTTGCAACAGTCTTCACTCCCTTCAACGATGATGGAAGCGTCAACTACAAAGTCATACCCAAAATCGCGACCTATCTGAAGTATAACGGGATTGATGGAGTTGTTGTCGCGGATACACCAGGAGAGGGACCGAACTTGAACCTTTGTGAGACGAAGAAACTTCTTGACTCTTGGACAACTGCTGGGAGGCCCTTAGGATTGAAAGTGGTCGCCCAAATCGGAGGAAGCGCTCTGCCTGTCATCATCTCCTTGGCAAAATACGCAGCAAACCTTCAAGTAGACGCCCTCCTCGTTCTACCAACTCCTTACTACAAACCTGAAGACGCTTTGCAACTGGTCAGTCTTCTAGAACTGGTTGCTAAGGCAGCGCCTTCACTGCCTATCATCTACAATGATTCACACTTATCTGGATTGAATGTTGACATGGTGAGCTTCTTTAAGCTGGCTTCAGAAAGGATACCACAATTCAAAGGACTGAAGACAAAACTCGAAGTGGCTCTCAACGTAAAATCGTCAAACAATTTGAGAGAAGATCAGAACATATACATATCGGATTACCTTTCCATATCATCGGCACTTCAAGCGGGATTTGATACGTTCTTTGACGTGACTGCTAGCGTTTACCCCGAACTGATCTTGGAAATAATAAAATCGTGTAAAAACTCCGACGACACGGCAGCTATTGAAGCTCAACAGAAACTATCACATCTTACAAATAAAATTATCGCTAAAGGCGGAGTCATACCAGGCTTAAAAGCAGCTGCGGAAATCGTTACCGGTTACAAATTCGGGGACCCCAGACAGCCCCTGCAGCCAGTCTCCCAAGAAGACAAGAATGATATCAAGACCATCTTAGAAGAAAACGGGTGCAGAATCTCCGCATTTTAG

Protein

MYSISGLTFLCVLIINVFDTKCEDYAEFNQKGVFATVFTPFNDDGSVNYKVIPKIATYLKYNGIDGVVVADTPGEGPNLNLCETKKLLDSWTTAGRPLGLKVVAQIGGSALPVIISLAKYAANLQVDALLVLPTPYYKPEDALQLVSLLELVAKAAPSLPIIYNDSHLSGLNVDMVSFFKLASERIPQFKGLKTKLEVALNVKSSNNLREDQNIYISDYLSISSALQAGFDTFFDVTASVYPELILEIIKSCKNSDDTAAIEAQQKLSHLTNKIIAKGGVIPGLKAAAEIVTGYKFGDPRQPLQPVSQEDKNDIKTILEENGCRISAF

Similarity

Belongs to the DapA family.

Uniprot

A0A2A4JEY1   A0A2H1W3A5   H9JYA3   A0A212ETD9   A0A3S2L1T7   H9JYA2   + More
H9J5M0   A0A158P438   A0A151IUE1   A0A2W1BRW0   E9IK31   A0A151WF36   A0A0N0PCS5   A0A023F7H9   A0A3S2NC89   A0A195FJA2   A0A1B6DZ58   E2BFR7   A0A2A4JFY8   F4X1Y9   I4DPJ4   R4FL94   A0A194PFM7   A0A2A4JFM5   A0A195FJP7   A0A151JBW8   A0A1L8DCV7   A0A158P437   A0A151WF58   A0A0C9RWH4   A0A232EGK8   A0A1S4FMA1   Q16WA2   A0A087ZVV2   F4X1Z0   E2AJ86   A0A232FEM4   A0A0P4VHC9   K7IMV4   A0A224XHH7   K7J245   A0A0N0BGL6   A0A336M102   A0A182GZ29   A0A1B6IYA4   A0A2A3EF84   A0A067RJQ4   A0A1Y1KGM9   A0A1Y1KH54   A0A1B6CQ74   A0A182T0U9   A0A182M3E0   A0A2J7QQ19   A0A0A9Z1Y6   A0A0K8SKB8   A0A0C9QMI7   A0A1B0CHZ1   A0A182PA02   A0A1B6I5W9   A0A182VFB3   A0A084VF66   A0A2J7QPZ4   E0VUC4   Q7PTG5   D6WME9   A0A182X6K7   A0A182KS08   A0A182TEK1   J3JYH0   A0A182WIY3   A0A1B6LID4   A0A195CNB7   A0A336KD48   A0A182I3V6   A0A1D1W6I8   A0A182RB21   A0A232FM85   A0A182QP80   A0A182FG30   A0A1B0AT91   A0A336M1U9   K7IMV5   A0A1Y1KBI2   A0A1W4X969   A0A182NHC9   A0A1W4X7X0   A0A1Q3FDN6   T1HX93   W5JKQ9   A0A182JMC6   B0VZR3   H9J5R9   T1DNX9   R4WNH6   A0A1B7JTC7   A0A292C6V6  

Pubmed

19121390    22118469    21347285    28756777    21282665    26354079    + More
25474469    20798317    21719571    22651552    28648823    17510324    27129103    20075255    26483478    24845553    28004739    25401762    26823975    24438588    20566863    12364791    14747013    17210077    18362917    19820115    20966253    22516182    27649274    20920257    23761445    23691247   

EMBL

NWSH01001636    PCG70617.1    ODYU01006029    SOQ47513.1    BABH01042768    AGBW02012595    + More
OWR44747.1    RSAL01000235    RVE43726.1    BABH01025066    ADTU01008424    KQ980964    KYN11012.1    KZ149918    PZC77822.1    GL763924    EFZ18997.1    KQ983227    KYQ46426.1    KQ460594    KPJ13942.1    GBBI01001520    JAC17192.1    RVE43727.1    KQ981523    KYN40483.1    GEDC01006332    GEDC01003561    JAS30966.1    JAS33737.1    GL448039    EFN85455.1    PCG70618.1    GL888558    EGI59525.1    AK403635    BAM19834.1    GAHY01001523    JAA75987.1    KQ459604    KPI92181.1    PCG70619.1    KYN40482.1    KQ979110    KYN22602.1    GFDF01009887    JAV04197.1    KYQ46425.1    GBYB01013345    JAG83112.1    NNAY01004742    OXU17487.1    CH477572    EAT38848.1    EGI59526.1    GL439967    EFN66526.1    NNAY01000352    OXU28970.1    GDKW01002751    JAI53844.1    GFTR01004480    JAW11946.1    KQ435775    KOX74992.1    UFQT01000393    SSX23925.1    JXUM01098550    KQ564429    KXJ72292.1    GECU01015785    JAS91921.1    KZ288262    PBC30397.1    KK852639    KDR19640.1    GEZM01087347    JAV58745.1    GEZM01087346    JAV58746.1    GEDC01028887    GEDC01021641    JAS08411.1    JAS15657.1    AXCM01001459    NEVH01012087    PNF30663.1    GBHO01005141    GBHO01005140    GDHC01021560    JAG38463.1    JAG38464.1    JAP97068.1    GBRD01012074    GBRD01012073    GDHC01015486    JAG53751.1    JAQ03143.1    GBYB01004719    JAG74486.1    AJWK01012915    AJWK01012916    GECU01025380    JAS82326.1    ATLV01012362    KE524785    KFB36610.1    PNF30658.1    DS235785    EEB16980.1    AAAB01008807    EAA03961.4    KQ971343    EFA04261.2    BT128298    AEE63256.1    GEBQ01016525    JAT23452.1    KQ977513    KYN02246.1    UFQS01000285    UFQT01000285    SSX02419.1    SSX22794.1    APCN01000225    BDGG01000014    GAV07054.1    NNAY01000037    OXU31693.1    AXCN02000896    JXJN01003203    SSX22803.1    GEZM01087348    JAV58744.1    GFDL01009354    JAV25691.1    ACPB03006242    ADMH02001258    ETN63359.1    DS231815    EDS35155.1    BABH01025065    GAMD01002465    JAA99125.1    AK417186    BAN20401.1    CP023965    ATM99059.1   

Proteomes

UP000218220    UP000005204    UP000007151    UP000283053    UP000005205    UP000078492    + More
UP000075809    UP000053240    UP000078541    UP000008237    UP000007755    UP000053268    UP000215335    UP000008820    UP000005203    UP000000311    UP000002358    UP000053105    UP000069940    UP000249989    UP000242457    UP000027135    UP000075901    UP000075883    UP000235965    UP000092461    UP000075885    UP000075903    UP000030765    UP000009046    UP000007062    UP000007266    UP000076407    UP000075882    UP000075902    UP000075920    UP000078542    UP000075840    UP000186922    UP000075900    UP000075886    UP000069272    UP000092460    UP000192223    UP000075884    UP000015103    UP000000673    UP000075880    UP000002320    UP000222988   

PRIDE

H9JYA3    H9JYA2    H9J5M0    A0A087ZVV2    H9J5R9   

Pfam

PF00701   DHDPS        + More
PF03101   FAR1

Interpro

IPR020624   Schiff_base-form_aldolases_CS        + More
IPR002220   DapA-like       
IPR013785   Aldolase_TIM       
IPR020625   Schiff_base-form_aldolases_AS       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR004330   FAR1_DNA_bnd_dom       

SUPFAM

SSF48726   SSF48726       

Gene 3D

3.20.20.70     2.60.40.10    

ProteinModelPortal

A0A2A4JEY1   A0A2H1W3A5   H9JYA3   A0A212ETD9   A0A3S2L1T7   H9JYA2   + More
H9J5M0   A0A158P438   A0A151IUE1   A0A2W1BRW0   E9IK31   A0A151WF36   A0A0N0PCS5   A0A023F7H9   A0A3S2NC89   A0A195FJA2   A0A1B6DZ58   E2BFR7   A0A2A4JFY8   F4X1Y9   I4DPJ4   R4FL94   A0A194PFM7   A0A2A4JFM5   A0A195FJP7   A0A151JBW8   A0A1L8DCV7   A0A158P437   A0A151WF58   A0A0C9RWH4   A0A232EGK8   A0A1S4FMA1   Q16WA2   A0A087ZVV2   F4X1Z0   E2AJ86   A0A232FEM4   A0A0P4VHC9   K7IMV4   A0A224XHH7   K7J245   A0A0N0BGL6   A0A336M102   A0A182GZ29   A0A1B6IYA4   A0A2A3EF84   A0A067RJQ4   A0A1Y1KGM9   A0A1Y1KH54   A0A1B6CQ74   A0A182T0U9   A0A182M3E0   A0A2J7QQ19   A0A0A9Z1Y6   A0A0K8SKB8   A0A0C9QMI7   A0A1B0CHZ1   A0A182PA02   A0A1B6I5W9   A0A182VFB3   A0A084VF66   A0A2J7QPZ4   E0VUC4   Q7PTG5   D6WME9   A0A182X6K7   A0A182KS08   A0A182TEK1   J3JYH0   A0A182WIY3   A0A1B6LID4   A0A195CNB7   A0A336KD48   A0A182I3V6   A0A1D1W6I8   A0A182RB21   A0A232FM85   A0A182QP80   A0A182FG30   A0A1B0AT91   A0A336M1U9   K7IMV5   A0A1Y1KBI2   A0A1W4X969   A0A182NHC9   A0A1W4X7X0   A0A1Q3FDN6   T1HX93   W5JKQ9   A0A182JMC6   B0VZR3   H9J5R9   T1DNX9   R4WNH6   A0A1B7JTC7   A0A292C6V6  

PDB

5AFD     E-value=9.18101e-22,     Score=255

KEGG

101739659    K01639 N-acetylneuraminate lyase [EC:4.1.3.3] | (RefSeq) N-acetylneuraminate lyase-like

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016829   GO:0008152   GO:0003824   GO:0004180   GO:0005515   GO:0003676   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

PANTHER

PTHR12128  

SignalP

Position:   1 - 22,         Likelihood:  0.945599

 

 

Length:

328

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13986

Exp number, first 60 AAs:

0.08302

Total prob of N-in:

0.00838

outside

1  -  328

 

 

Pi

25.687077

Theta

170.140504

Tajima's D

1.376579

CLR

1.418368

CSRT

0.763261836908155

Interpretation

Uncertain