Gene

KWMTBOMO15043

Pre Gene Modal

BGIBMGA014522

Annotation

PREDICTED:_N-acetylneuraminate_lyase-like_[Bombyx_mori]

Location

Bomo_Chr25(-):3408083-3417247      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.167 PlasmaMembrane   Reliability : 1.359

CDS

ATGATTCGTTTTCTTTTTTCTTTTTTGATTGTGCTAGTGAGTATATCGAAAGAGGCGTACGGGCAGCAAGAAGCCCTTTCCGGAATGTACAGTCCCGTGTTCACTCCATTTAACACGTCTAGTGGAGAAATCGACCTATCTGTCATTCCTGAGTATGCGCAGTTCTTGAAGGATGGTGGAACTGATGGGGTCTCCGTGGCCACGCTTACCGGGGAGGGCTTGAGTTTGAGTGTAGATGAAAAGAAAAAGCTATATGAAGCTTGGGTGAATGCGGCCAGGCCTCTGGGTCTCAAGATTATCGTTCAAGTAGGAGGAATACCCGTGCCTGATATCATTGAACTGACACATTATGCTGTCAATATAAGTGTGGACGGCATTCAACTTCTTCCACCGCCTTATTATATTATAACGAATTCGGATGAGTTCGTTGCCTTACTTGAGATAGTGGCCGAGAACGCTGGCGACCTACCTATTTATTACGATGATTTTTACGAATATACACTCGAAGAAGAAGACGACTTTTCTCTACAATCTTACTTCGATTCGGCCTCTAGGAGAGTAGCGCAATTCAAGGGCATGGTCGGTACATTTAGGGTCGCAGTGTATGCATCTCTAGAAAACGACCCGAGGAGCGACCAGACCATCTTTATTTATAACCAGCCAAATGTTGAAGCCGCAGCTTTCATGGACTGTAATTCGTTCATGCTACCGGCAATGAACATTTTCCCGAGCCTTTTCAAGCAGATCGTCGACCTGAGCTCTAACGGAACTAGATCAGAAGAAGCTCTCGCTATTCAGGACAGATTGAACGATATCGTCTACGAGATATTAGACAAAGGAGATGATGTAGCAACGTTAAAAGCAGCCGCTGAACTGGTATCAGGGATTAAGCTTGGCGGCGTTCGTCCTCCAATGCGTGCTTTATCCAGGACGACGTACATGGAGATCAAGGATATACTTGAAGACAATGACGTCGAAACACACGACTAG

Protein

MIRFLFSFLIVLVSISKEAYGQQEALSGMYSPVFTPFNTSSGEIDLSVIPEYAQFLKDGGTDGVSVATLTGEGLSLSVDEKKKLYEAWVNAARPLGLKIIVQVGGIPVPDIIELTHYAVNISVDGIQLLPPPYYIITNSDEFVALLEIVAENAGDLPIYYDDFYEYTLEEEDDFSLQSYFDSASRRVAQFKGMVGTFRVAVYASLENDPRSDQTIFIYNQPNVEAAAFMDCNSFMLPAMNIFPSLFKQIVDLSSNGTRSEEALAIQDRLNDIVYEILDKGDDVATLKAAAELVSGIKLGGVRPPMRALSRTTYMEIKDILEDNDVETHD

Similarity

Belongs to the DapA family.

Uniprot

H9JYA2   H9JYA3   A0A2A4JEY1   A0A2H1W3A5   A0A3S2L1T7   H9J5M0   + More
A0A0C9RWH4   A0A2W1BRW0   A0A151WF36   A0A151JBW8   F4X1Y9   A0A212ETD9   E9IK31   A0A151IUE1   A0A195FJA2   A0A158P438   E2BFR7   A0A195FJP7   A0A158P437   R4FL94   A0A1B6DZ58   A0A0C9QMI7   A0A182QP80   A0A084VF66   A0A336KD48   A0A0N0PCS5   A0A151WF58   A0A1W4X969   A0A1W4X7X0   A0A182JMC6   A0A182NHC9   A0A182M3E0   A0A194PFM7   A0A1Q3FDN6   A0A182WIY3   B0VZR3   A0A3S2NC89   I4DPJ4   A0A0N0BGL6   A0A182T0U9   W5JKQ9   A0A232FEM4   K7IMV4   A0A182VFB3   F4X1Z0   A0A182X6K7   A0A182KS08   A0A023F7H9   E2AJ86   A0A182TEK1   A0A232EGK8   J3JYH0   Q7PTG5   A0A1S4FMA1   A0A182FG30   Q16WA2   T1DNX9   A0A087ZVV2   A0A2A4JFY8   A0A182JTV7   A0A182I3V6   A0A0P4VHC9   A0A2A4JFM5   A0A2A3EF84   K7J245   K7J519   A0A1Y1KKF9   A0A232FM85   A0A182PA02   A0A023FWC0   R4WNH6   A0A1Y1KN37   A0A182RB21   N6TUA9   A0A2J7QQ19   A0A023FJR7   D6WME9   A0A182GZ29   A0A2J7QPZ4   A0A224XHH7   A0A1B6LID4   N6TWK1   A0A224YUB4   A0A131YL38   A0A1E1XAM2   A0A1B6IYA4   A0A195CNB7   A0A1B6I5W9   E0VUC4   A0A067RJQ4   N6UI15   D6WP51   H9J5R9   A0A1E1X9I1   A0A336M102   A0A1Y1LHN7   A0A1L8DCV7   A0A310SPK1   A0A0T6ATU1  

Pubmed

19121390    28756777    21719571    22118469    21282665    21347285    + More
20798317    24438588    26354079    22651552    20920257    23761445    28648823    20075255    20966253    25474469    22516182    12364791    14747013    17210077    17510324    27129103    28004739    23691247    23537049    18362917    19820115    26483478    28797301    26830274    28503490    20566863    24845553   

EMBL

BABH01042768    NWSH01001636    PCG70617.1    ODYU01006029    SOQ47513.1    RSAL01000235    + More
RVE43726.1    BABH01025066    GBYB01013345    JAG83112.1    KZ149918    PZC77822.1    KQ983227    KYQ46426.1    KQ979110    KYN22602.1    GL888558    EGI59525.1    AGBW02012595    OWR44747.1    GL763924    EFZ18997.1    KQ980964    KYN11012.1    KQ981523    KYN40483.1    ADTU01008424    GL448039    EFN85455.1    KYN40482.1    GAHY01001523    JAA75987.1    GEDC01006332    GEDC01003561    JAS30966.1    JAS33737.1    GBYB01004719    JAG74486.1    AXCN02000896    ATLV01012362    KE524785    KFB36610.1    UFQS01000285    UFQT01000285    SSX02419.1    SSX22794.1    KQ460594    KPJ13942.1    KYQ46425.1    AXCM01001459    KQ459604    KPI92181.1    GFDL01009354    JAV25691.1    DS231815    EDS35155.1    RVE43727.1    AK403635    BAM19834.1    KQ435775    KOX74992.1    ADMH02001258    ETN63359.1    NNAY01000352    OXU28970.1    EGI59526.1    GBBI01001520    JAC17192.1    GL439967    EFN66526.1    NNAY01004742    OXU17487.1    BT128298    AEE63256.1    AAAB01008807    EAA03961.4    CH477572    EAT38848.1    GAMD01002465    JAA99125.1    PCG70618.1    APCN01000225    GDKW01002751    JAI53844.1    PCG70619.1    KZ288262    PBC30397.1    AAZX01004643    GEZM01081089    JAV61892.1    NNAY01000037    OXU31693.1    GBBL01001516    JAC25804.1    AK417186    BAN20401.1    GEZM01081090    JAV61891.1    APGK01052042    APGK01052043    KB741208    KB631654    ENN72860.1    ERL85066.1    NEVH01012087    PNF30663.1    GBBK01003068    JAC21414.1    KQ971343    EFA04261.2    JXUM01098550    KQ564429    KXJ72292.1    PNF30658.1    GFTR01004480    JAW11946.1    GEBQ01016525    JAT23452.1    APGK01058332    KB741288    ENN70677.1    GFPF01010061    MAA21207.1    GEDV01008890    JAP79667.1    GFAC01002885    JAT96303.1    GECU01015785    JAS91921.1    KQ977513    KYN02246.1    GECU01025380    JAS82326.1    DS235785    EEB16980.1    KK852639    KDR19640.1    APGK01035366    APGK01035367    KB740923    ENN78297.1    KQ971352    EFA07262.1    BABH01025065    GFAC01003271    JAT95917.1    UFQT01000393    SSX23925.1    GEZM01055082    JAV73162.1    GFDF01009887    JAV04197.1    KQ760538    OAD59997.1    LJIG01022832    KRT78489.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000075809    UP000078492    UP000007755    + More
UP000007151    UP000078541    UP000005205    UP000008237    UP000075886    UP000030765    UP000053240    UP000192223    UP000075880    UP000075884    UP000075883    UP000053268    UP000075920    UP000002320    UP000053105    UP000075901    UP000000673    UP000215335    UP000002358    UP000075903    UP000076407    UP000075882    UP000000311    UP000075902    UP000007062    UP000069272    UP000008820    UP000005203    UP000075881    UP000075840    UP000242457    UP000075885    UP000075900    UP000019118    UP000030742    UP000235965    UP000007266    UP000069940    UP000249989    UP000078542    UP000009046    UP000027135   

PRIDE

H9JYA2    H9JYA3    H9J5M0    A0A087ZVV2    H9J5R9   

Pfam

PF00701   DHDPS        + More
PF03101   FAR1
PF09774   Cid2

Interpro

IPR002220   DapA-like        + More
IPR013785   Aldolase_TIM       
IPR020624   Schiff_base-form_aldolases_CS       
IPR004330   FAR1_DNA_bnd_dom       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR000690   Matrin/U1-C_Znf_C2H2       
IPR020625   Schiff_base-form_aldolases_AS       
IPR019171   Caffeine_induced_death_Cid2       

SUPFAM

SSF48726   SSF48726       

Gene 3D

3.20.20.70     2.60.40.10    

ProteinModelPortal

H9JYA2   H9JYA3   A0A2A4JEY1   A0A2H1W3A5   A0A3S2L1T7   H9J5M0   + More
A0A0C9RWH4   A0A2W1BRW0   A0A151WF36   A0A151JBW8   F4X1Y9   A0A212ETD9   E9IK31   A0A151IUE1   A0A195FJA2   A0A158P438   E2BFR7   A0A195FJP7   A0A158P437   R4FL94   A0A1B6DZ58   A0A0C9QMI7   A0A182QP80   A0A084VF66   A0A336KD48   A0A0N0PCS5   A0A151WF58   A0A1W4X969   A0A1W4X7X0   A0A182JMC6   A0A182NHC9   A0A182M3E0   A0A194PFM7   A0A1Q3FDN6   A0A182WIY3   B0VZR3   A0A3S2NC89   I4DPJ4   A0A0N0BGL6   A0A182T0U9   W5JKQ9   A0A232FEM4   K7IMV4   A0A182VFB3   F4X1Z0   A0A182X6K7   A0A182KS08   A0A023F7H9   E2AJ86   A0A182TEK1   A0A232EGK8   J3JYH0   Q7PTG5   A0A1S4FMA1   A0A182FG30   Q16WA2   T1DNX9   A0A087ZVV2   A0A2A4JFY8   A0A182JTV7   A0A182I3V6   A0A0P4VHC9   A0A2A4JFM5   A0A2A3EF84   K7J245   K7J519   A0A1Y1KKF9   A0A232FM85   A0A182PA02   A0A023FWC0   R4WNH6   A0A1Y1KN37   A0A182RB21   N6TUA9   A0A2J7QQ19   A0A023FJR7   D6WME9   A0A182GZ29   A0A2J7QPZ4   A0A224XHH7   A0A1B6LID4   N6TWK1   A0A224YUB4   A0A131YL38   A0A1E1XAM2   A0A1B6IYA4   A0A195CNB7   A0A1B6I5W9   E0VUC4   A0A067RJQ4   N6UI15   D6WP51   H9J5R9   A0A1E1X9I1   A0A336M102   A0A1Y1LHN7   A0A1L8DCV7   A0A310SPK1   A0A0T6ATU1  

PDB

6ARH     E-value=5.98333e-18,     Score=222

KEGG

101739376    K01639 N-acetylneuraminate lyase [EC:4.1.3.3] | (RefSeq) N-acetylneuraminate lyase-like

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016829   GO:0003676   GO:0008270   GO:0005634   GO:0016021   GO:0008152   GO:0003824   GO:0004180   GO:0005515   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

PANTHER

PTHR12128  

SignalP

Position:   1 - 21,         Likelihood:  0.994421

 

 

Length:

329

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0287599999999999

Exp number, first 60 AAs:

0.02343

Total prob of N-in:

0.00273

outside

1  -  329

 

 

Pi

199.496265

Theta

134.303433

Tajima's D

1.172295

CLR

0.114786

CSRT

0.708214589270536

Interpretation

Uncertain