SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15030
Pre Gene Modal
BGIBMGA004867
Annotation
PREDICTED:_uncharacterized_protein_LOC101745601_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.954
 

Sequence

CDS
ATGGACGGAACATGGTACGTGGCAGCGGTCGCCACAGACATGCAGGTCCAGGGTGACTGCGCGATGATAATCTTCGACCACCAGGAGACCCCGGACGTTTCCATCAGGTGGATCACCAACAACACCGCTTCCTTCTATAACGGCTCTGTGGCTCTGACTCCTGATCCAAACGGCAACAGTACAGGCGGTGATCTTTTACTGGTGACCTATAATGACAACAAAACGGAGACTTATTCGTTTCTGGACATCAACTACGAACATTATGCTGTCGTGTTCGCATGTTACAACAACGACGATGGTAGCAGCACATATGAAATTTGGAAATTGACGCGCACGCCACATCTGAAGGACACGGACGCCGTGAAACTAGACCAGGCTATAGCGAACTACAGTCTACAAGGCACACCTTTCATCAATTTTAATAATACAGAAGACACTTGCCGGATTAACGCTGGCAGACAGTTGGATGCGTCGACTCTCATAATGACGTCAGCGGCTGCGATCACGCTCCTCAGGCGAATGTTCTAG
Protein
MDGTWYVAAVATDMQVQGDCAMIIFDHQETPDVSIRWITNNTASFYNGSVALTPDPNGNSTGGDLLLVTYNDNKTETYSFLDINYEHYAVVFACYNNDDGSSTYEIWKLTRTPHLKDTDAVKLDQAIANYSLQGTPFINFNNTEDTCRINAGRQLDASTLIMTSAAAITLLRRMF

Summary

Similarity
Belongs to the calycin superfamily. Lipocalin family.
Pfam
PF00061   Lipocalin        + More
PF03973   Triabin
PF08212   Lipocalin_2
Interpro
IPR012674   Calycin        + More
IPR000566   Lipocln_cytosolic_FA-bd_dom       
IPR003057   Invtbrt_color       
IPR005657   Triabi/Procalin       
IPR022272   Lipocalin_CS       
IPR022271   Lipocalin_ApoD       
IPR002969   ApolipopD       
IPR026222   ApoD_vertbrte       
SUPFAM
SSF50814   SSF50814       
Gene 3D
PDB
4GET     E-value=0.0600991,     Score=80

Ontologies

Topology

Length:
175
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.36217
Exp number, first 60 AAs:
0.00827
Total prob of N-in:
0.24765
outside
1  -  175
 
 

Population Genetic Test Statistics

Pi
280.186364
Theta
157.98207
Tajima's D
2.103147
CLR
0.017398
CSRT
0.898755062246888
Interpretation
Uncertain
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