Silkworm Genome Informatics Database

Gene

KWMTBOMO15013

Pre Gene Modal

BGIBMGA004871

Annotation

PREDICTED:_uncharacterized_protein_LOC106136208_[Amyelois_transitella]

Location

Bomo_Chr25(-):2437228-2442672 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.535 Mitochondrial Reliability : 1.179

CDS

ATGATTTCTAGTTTAGTGCTAATACTGGCTTTGTCGTATGCTTCCGGGCAAAACAATCTAGTTGTCGACACCAGGGCGAGAGTGCAGCATCACACAGAATACTACACAAAACTTATTCAAAAGCTAGTTTATGAGTTGGAAAAACGTGGCTTCTGCAATTTGAAATTGAATGACGTAATTATAGAACATAATGAACAACTCTACAACTTCCTGGTATCCGGAAACGCGACTTACACTAACGGGTTTCTAGTGTCCATAGAGAAGATAGATGTCACGAATATGGAACAGAGAGTCACCAGGGATATTGTGAATGGGGCGAGCGTTCCTACGGCGTTAGTTCGCGGAAGATTGAATTTAAGGGACGTGAAAGTTGGCTTCGATGTTGATGCGCACATCAATGATGAACTTAGGCACTATACCGGAGCTTTTACACACATACTAGTCCAATACGAATTGAATGTCCACAAGAATTTGGTGTCTGGGGAACTTCATACTTCTATGAGGCTGTTGAGTCTGATGCCCAGTGCTACAGTCCGGATGGACTACATGCCAACGGACAGCATCACCGAAGCTTTGTCGAGACGTTTCGTACCAAGCATGAACAGGAATAGCGCTGAAAACTGGGGAACACATTTCGCTTCGATATTGTTGGAGAAGGCGAAAAATAAAATACCGTTCCCAAATGTTTGCTTTAATTGTTAA

Protein

MISSLVLILALSYASGQNNLVVDTRARVQHHTEYYTKLIQKLVYELEKRGFCNLKLNDVIIEHNEQLYNFLVSGNATYTNGFLVSIEKIDVTNMEQRVTRDIVNGASVPTALVRGRLNLRDVKVGFDVDAHINDELRHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRFVPSMNRNSAENWGTHFASILLEKAKNKIPFPNVCFNC

Uniprot

H9J5T1 A0A2A4JT51 A0A2H1WNV7 A0A194RHN1 A0A1E1VXT7 A0A2W1C0F4 + More
A0A2A4JTZ8 A0A2H1WNY9 A0A194PFT3 A0A2A4JU81 W5JSZ6 T1DLY1 A0A336LPM7 Q17DG4 A0A2C9GR65 A0A340TB29 A0A182XUI4 A0A182LEP7 Q7PR80

Pubmed

19121390 26354079 28756777 20920257 23761445 17510324 + More
20966253 12364791 14747013 17210077

EMBL

BABH01025161 NWSH01000660 PCG74956.1 ODYU01009975 SOQ54749.1 KQ460205 + More
KPJ17072.1 GDQN01011527 JAT79527.1 KZ149903 PZC78446.1 PCG74953.1 SOQ54748.1 KQ459604 KPI92152.1 PCG74952.1 ADMH02000177 ETN67497.1 GAMD01000186 JAB01405.1 UFQT01000043 SSX18751.1 CH477295 EAT44420.1 APCN01000295 AAAB01008859 EAA07695.4

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000000673 UP000008820 + More
UP000075840 UP000075903 UP000076407 UP000075882 UP000007062

PRIDE

H9J5T1

ProteinModelPortal

H9J5T1 A0A2A4JT51 A0A2H1WNV7 A0A194RHN1 A0A1E1VXT7 A0A2W1C0F4 + More
A0A2A4JTZ8 A0A2H1WNY9 A0A194PFT3 A0A2A4JU81 W5JSZ6 T1DLY1 A0A336LPM7 Q17DG4 A0A2C9GR65 A0A340TB29 A0A182XUI4 A0A182LEP7 Q7PR80

KEGG

101746888 no KO assigned | (RefSeq) uncharacterized LOC101746888

GO

SignalP

Position: 1 - 16, Likelihood: 0.978264

Length:

233

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15698

Exp number, first 60 AAs:

0.14542

Total prob of N-in:

0.00933

outside

1 - 233

Pi

256.205913

Theta

172.86091

Tajima's D

1.591697

CLR

0.21603

CSRT

0.807559622018899

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics