SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15012  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004872
Annotation
PREDICTED:_eukaryotic_translation_initiation_factor_2-alpha_kinase_4_[Amyelois_transitella]
Full name
eIF-2-alpha kinase GCN2      
Alternative Name
Eukaryotic translation initiation factor 2-alpha kinase 4
GCN2-like protein
Location in the cell
Nuclear   Reliability : 2.939
 

Sequence

CDS
ATGGCTGAAGAGAGCTACGAGGAGAGACAAAATAATGAGCTAACCGCCTTACAGGCTATATATGGTGATGCTGTTATTGATAATCGCGAAAACATTGCTTGGAAAGTATGGCGTCCGCTCGATATAATGTTGACGTTGAATCCACTTCACAACTCAGATATACAAGGTGTTCACTGCTCTGTAACATTGCATTTAAAATGTTGCAATAATTATCCTGACAAGCCACCAAGTCTAGCCATACACAAGATGCATGGATTATCCACAGACAATGCCACCAAATTATTGGCTGAATTGGAGACATTGTCACATCAATTGTGTGGTGAAGTTATGATATTCCAACTAGCCCAGCATGCACAGCAATTTCTGCACGATCACAATAAGCCTATATTGTCGTTTTACGATGAAATGCTGAAGCAGAAGAATGAAATGGAGAAACTGAAACTTCATGATTTACAAACCAAAGAGGAGGAAGAACGCCAAAAAATCAAAGATGAGATACAACGTCGTCAGGAGATACTCAAAGGTGCCGGAAGACAGCGTGTCCGAGTCTCCAGCCTCTGCCATGATAACAGCACGGAACAGGACTGCACTGATGAAAAGGTGGATGCACCAGAGCTTGTATTCTATGCGGACGATAAAATGTCGCCAGTAAAGAAATCAACACGTCTTCGAAACATGGAGGTTCCGTGCACGTGTAACACGCGAGGAGTGCAAGTGCTCAGAGTGACGCAACGGAACAACAAGAAGGTTTACATAGGGAGCTGTTTAGGACATTCATCGACCGGCGCGACAACATATCTAGCGATAGACGACGACACAGGGGAAAGTCTTATCGCAAAGAAGTGGAGCATCCCACCGGCTTCAGACTTCCAAACGAGAAACAAACAGCTTACATCGATACAGCAAGACGTGAAGTCGCTTGCCCGACTCAGCAACGCCTCCTTGATCCCATACGTTGCAATGGAGATGTGTAAAGAAGTAAACAAACGAACGTCAAAACAGTGCATTTATATATTCAGAAGTTTCGTTCTAGGGACGTCCTTGAAGAATCTAGTGAAAAAGTTGAGTGGTTTCAGTGATTGCTTTGAGGTTTTGGGCCTCTTGAGACATGTGGCTGACGGTGTTTTGAGTGCGTTAAACGAATTGCATGCAGCGAATATAATACATAGGGATGTTAGAAGTGAAAATGTATTCGTCGATGACGTTGGCCAAGTGAAGTTGGTTGGTGCTAGCTTGGACACCAGGTTGGCTGAAATGTTGGACAATGATAACTATTGTGATAAGCAAACCCCAGCCCAAGATATCTATGCGACCGGACAACTTCTGTTATCCATTGTTTGCAAAGAAAAATCGTATACAGAAATACCGCAGGAGCTCCCTTGCGTGGCAAAAGACTTCATATCCAGATGTTTAACAGAAGACGAACATTCGCAATGGTCGGCGAAGCAGTTGATGAGTCATTACTTCTTAGTCGAAGCTCCGACAAAGAAACCTTACGTCAAACGTGCCGACGACGGTGGAAGCGGTTCAGAGGACGACGACGCCGTCAAAAAGATTCGACACATGAGTTTTGCCAACAACGGGCTGTCGCGGCTGGACGCTGAGTTTGAGGTGCTAGCGTGGCTCGGGAAAGGCGCATTCGGTGATGTTTTGAAGGTAAAGAACAAACTGGACGGAGGTTTCTACGCGATAAAAAGAGTCCAATTGAATCCTGAAAGCGTTCAGCTCAACAAGAAGATAACAAGGGAAGTGAAACTCCTCTCCAGGCTCAACCACGAGAACGTAGTCCGCTATTACAACGCGTGGATCGAGTCGACAACTGAGCCGATAGACTGTGAGGAATCTCCCACCAAAACTCCTACCCGGAAACCCAGCTTGGAAGGTATTGTCGCGAAACTGGGACAAGAGGTCAAAGTGGAGTGGTCCATGTCAGAGGGACCGGCGCAGATGACGAATTCCACATCGGACACCGAAGATAGCGATGACGATGAACCGGATCCGTGGTTTAATATCATCAGCCCCGGTGACGAATCGAGCGAACTTATCGAATTCGAAAAGACCTCTGACGACGAAGAATCTCAGACGTTACCATCGGAAGACGTTGTCGACGCGCCGAGACCTCAATCCGAGCGTCTCAAGCAAGTCCTATACATCCAAATGGAATTTTGCGAGAAGCATACATTGAGACAAGCCATAGACAACGGCTTGTTCCAGGAACATTTCAGGGCGTGGAGGCTGTTCCGGGAGATCGTCGAGGGTCTGGCCCACGTGCATCAGAGAGGCATGATACACAGGGACCTCAAGCCTGTGAATATATTCTTGGACTCGAACGACCATGTCAAGATTGGAGACTTCGGACTAGCAACTAAGGCGTTCACGGGACTGCCGGTTGAAGATAAAACGAAACAAGAAGAAATAGGCGGTTCGCTAACTGGGCAAATAGGAACAGCCCTATACGTAGCTCCCGAACTACTCCAGTCTGCTACAAAGGTCATATACAATCAAAAAGTGGACATATATTCATTAGGCATAATATTGTTTGAAATGTTCCATCCGCCCCTCGAAACTGGAATGGAGAGAATGATGGTGCTCACCAATTTGAGGAGCAAGGATATCGTCATACCGAATAAGTTTGATGTCGACGAAAATGTGAAGCAGATTCATGTCATAAGATGGTTGCTGAACCACGAGGCGAGCCTGCGGCCCACGTGCGCGGAGCTGCTGGCCAGCGAGCACGTGCCGCGCGCCGTGCCCGAGGGCGCGCTGGCCGGGCTGCTGTCGCACGCGCTCAGCGACCGCACGGCGCGCGGCTACCAGCGCCTCGTGGCCGCCTGCCTCGACCAGAGGCCGTCCGCAGCCGAGGACTACACCTACCACAACGGGATGAAGACCAAGCCCGCCCGTCTCCTGGAGTTCGTCAAGGATGCTGTTGTCAAGGTATTCAAAAGTCACGGAGCTTTAGAGTTCGCTCCGCCGCTCCTTATACCGAGAGCGAGAGCCTGGGACCAGTATCCTAACGCTGTCAAAGTCATGACGTCATCGGGCTCGGTCTGTCATTTACCGCACGACTTGAGGCTGCCTTTCGCCAGGCACATAGCATACTCCGGTATAAAAAATCTCCGTCGTTTTATAGTCGATAGGGTTTATAGAGAGAAGCACGTTCAAGGTTTTCACCCGAAGGAAATTCTTGAATGTGCCTACGATATCGTCACCCCTAAAACTGACTCTCTATGGCCGGACGCAGAATTAATAGAGGTCGCAAGTAGAGCGGCATCGGAGTGTTCCCTCAAAGTGTCGATACAACTAAATCACACGGAACTGATTCGCGTCCTGCTACAGTCGTGCGGGGTACCGACAGACAAACAGGCTGATATATACCCTGTTTTGGTCGACGTCAGCTTCGGTCGCATAACGAGTCTGCAACTTCAAACACACTTGACGTCGCTCTGTATAACGAATCGTGACGTCACGAACCTGGTCCGCCTGATGGAGGCGGATGCGCCGGTCCAAGAGCTCCGGGAGCTGGTCACGCCTCTCGTCAAACAAGCGAAGTGCAGTAGGATCGCGAGTCAGGCCGTGCACGACCTGGAAGCCGTGTACAGGAACGCCAAGGCGCTGGGCTGTGAGTGCCCGATGACGGTGGCTCCGCTCTCGGCGTACAACGTGACGCAGCACAGCGGCGTGTTCTGGCAGATGTCCGTCGTGCGAAGCGAACAGAAGTCGATCACCAAACGACGTTCCGGGGACCTTATTGCGGCTGGCGGAAGATACGACGCTCTGGTCAAGGAGTTCTGGAATGTAGCGAGCGCGGAAAACGATCAAGACAGCGCCGATTTGAATGTGTGTTCGGTCGGGTTCTCGATGTCCCTCGAACGGATGGCGGCCTTCCTCAACAAACTGGAGACGCAAACGAACGTGCCGATCAAGAGTAACGAGACGCCGCTGGTGCACGTGCGCGTGTGGGGCGCGGTGGGCAGCGGGCGGGAGGGCGCGGCGGCGGCGCGGCGGGCGCAGCTGGCGCGCGATCTGTGGGCGGGCGGGCTGCGAGCCGGGCTGCACGCGGGGGACGCGCCCGACCTCGCGCCCGGCGCCGTGCTGGCCGAGCACGACCCGCCCCTCGTCCGGCTGTCCTGCTGGGACCAGGACAGGATCCGGGAACACAGGGTGCCCTACGTGGATGTTGTCGATTTCATCAAACAAAAAATTATCGGCGACTCGTCTCGGAATCCTGAAGGTTCTAGCACGAACCGATCGATAAGCTGGTCCGAAAGCTCCGAAAAATACAACAGTCCGAATATATCGGTCACTTTCATAACGGCCAGCGACAGAATGACGAAAAACTCGAAGAGGCACTGCGAGAATCAGATAAACACTCAAGTGACGTCGATTCTGGTAAGTCTGGGCCTCCTGCCGGTCATGGCGAGGGTGCGCGTCAACGTACTAGCCGTGGCCTGCGACTCCGCCTGCGTCAGGTACATGGCCTCGCAGCTGACGGCGCCATTAGATGCCGATGATCTGTCGCAAGCCTTCAGAAACGTTACGGAAATGTTCCCCAAACGTCAGGGCCTAATAGACGAAGCTCGCTCCGAGCTTTCGAGCTTATTGAAACAAACCAGCCCGAGTCGGAACAACGAAGAGACTCAAATATACGCCCTATATTCAATACCGGATTCATTGTGTCGACTTATTACTTGA
Protein
MAEESYEERQNNELTALQAIYGDAVIDNRENIAWKVWRPLDIMLTLNPLHNSDIQGVHCSVTLHLKCCNNYPDKPPSLAIHKMHGLSTDNATKLLAELETLSHQLCGEVMIFQLAQHAQQFLHDHNKPILSFYDEMLKQKNEMEKLKLHDLQTKEEEERQKIKDEIQRRQEILKGAGRQRVRVSSLCHDNSTEQDCTDEKVDAPELVFYADDKMSPVKKSTRLRNMEVPCTCNTRGVQVLRVTQRNNKKVYIGSCLGHSSTGATTYLAIDDDTGESLIAKKWSIPPASDFQTRNKQLTSIQQDVKSLARLSNASLIPYVAMEMCKEVNKRTSKQCIYIFRSFVLGTSLKNLVKKLSGFSDCFEVLGLLRHVADGVLSALNELHAANIIHRDVRSENVFVDDVGQVKLVGASLDTRLAEMLDNDNYCDKQTPAQDIYATGQLLLSIVCKEKSYTEIPQELPCVAKDFISRCLTEDEHSQWSAKQLMSHYFLVEAPTKKPYVKRADDGGSGSEDDDAVKKIRHMSFANNGLSRLDAEFEVLAWLGKGAFGDVLKVKNKLDGGFYAIKRVQLNPESVQLNKKITREVKLLSRLNHENVVRYYNAWIESTTEPIDCEESPTKTPTRKPSLEGIVAKLGQEVKVEWSMSEGPAQMTNSTSDTEDSDDDEPDPWFNIISPGDESSELIEFEKTSDDEESQTLPSEDVVDAPRPQSERLKQVLYIQMEFCEKHTLRQAIDNGLFQEHFRAWRLFREIVEGLAHVHQRGMIHRDLKPVNIFLDSNDHVKIGDFGLATKAFTGLPVEDKTKQEEIGGSLTGQIGTALYVAPELLQSATKVIYNQKVDIYSLGIILFEMFHPPLETGMERMMVLTNLRSKDIVIPNKFDVDENVKQIHVIRWLLNHEASLRPTCAELLASEHVPRAVPEGALAGLLSHALSDRTARGYQRLVAACLDQRPSAAEDYTYHNGMKTKPARLLEFVKDAVVKVFKSHGALEFAPPLLIPRARAWDQYPNAVKVMTSSGSVCHLPHDLRLPFARHIAYSGIKNLRRFIVDRVYREKHVQGFHPKEILECAYDIVTPKTDSLWPDAELIEVASRAASECSLKVSIQLNHTELIRVLLQSCGVPTDKQADIYPVLVDVSFGRITSLQLQTHLTSLCITNRDVTNLVRLMEADAPVQELRELVTPLVKQAKCSRIASQAVHDLEAVYRNAKALGCECPMTVAPLSAYNVTQHSGVFWQMSVVRSEQKSITKRRSGDLIAAGGRYDALVKEFWNVASAENDQDSADLNVCSVGFSMSLERMAAFLNKLETQTNVPIKSNETPLVHVRVWGAVGSGREGAAAARRAQLARDLWAGGLRAGLHAGDAPDLAPGAVLAEHDPPLVRLSCWDQDRIREHRVPYVDVVDFIKQKIIGDSSRNPEGSSTNRSISWSESSEKYNSPNISVTFITASDRMTKNSKRHCENQINTQVTSILVSLGLLPVMARVRVNVLAVACDSACVRYMASQLTAPLDADDLSQAFRNVTEMFPKRQGLIDEARSELSSLLKQTSPSRNNEETQIYALYSIPDSLCRLIT

Summary

Description
Metabolic-stress sensing protein kinase that phosphorylates the alpha subunit of eukaryotic translation initiation factor 2 (eIF-2-alpha/EIF2S1) on 'Ser-52' in response to low amino acid availability (PubMed:10504407, PubMed:10655230, PubMed:12176355, PubMed:12215525, PubMed:15213227, PubMed:16054071, PubMed:16176978, PubMed:16121183, PubMed:15774759, PubMed:16601681, PubMed:26102367). Plays a role as an activator of the integrated stress response (ISR) required for adapatation to amino acid starvation. Converts phosphorylated eIF-2-alpha/EIF2S1 either to a competitive inhibitor of the translation initiation factor eIF-2B, leading to a global protein synthesis repression, and thus to a reduced overall utilization of amino acids, or to a translational initiation activation of specific mRNAs, such as the transcriptional activator ATF4, and hence allowing ATF4-mediated reprogramming of amino acid biosynthetic gene expression to alleviate nutrient depletion (PubMed:10655230, PubMed:11106749, PubMed:12176355, PubMed:15213227, PubMed:16176978, PubMed:26102367). Binds uncharged tRNAs (By similarity). Involved in cell cycle arrest by promoting cyclin D1 mRNA translation repression after the unfolded protein response pathway (UPR) activation or cell cycle inhibitor CDKN1A/p21 mRNA translation activation in response to amino acid deprivation (PubMed:16176978, PubMed:26102367). Plays a role in the consolidation of synaptic plasticity, learning as well as formation of long-term memory (PubMed:16121183). Plays a role in neurite outgrowth inhibition (PubMed:23447528). Plays a role in feeding behavior to maintain amino acid homeostasis; contributes to the innate aversion toward diets of imbalanced amino acid composition (PubMed:16054071, PubMed:15774759). Plays a proapoptotic role in response to glucose deprivation (PubMed:20660158). Promotes global cellular protein synthesis repression in response to UV irradiation independently of the stress-activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK) and p38 MAPK signaling pathways (PubMed:12176355).
(Microbial infection) Plays a role in the antiviral response against alphavirus infection; impairs early viral mRNA translation of the incoming genomic virus RNA, thus preventing alphavirus replication.
(Microbial infection) Plays a role in modulating the adaptive immune response to Yellow fever virus infection; promotes dendritic cells to initiate autophagy and antigene presentation to both CD4(+) and CD8(+) T-cells under amino acid starvation.
Metabolic-stress sensing protein kinase that phosphorylates the alpha subunit of eukaryotic translation initiation factor 2 (eIF-2-alpha/EIF2S1) on 'Ser-52' in response to low amino acid availability (PubMed:25329545). Plays a role as an activator of the integrated stress response (ISR) required for adapatation to amino acid starvation. Converts phosphorylated eIF-2-alpha/EIF2S1 either to a competitive inhibitor of the translation initiation factor eIF-2B, leading to a global protein synthesis repression, and thus to a reduced overall utilization of amino acids, or to a translational initiation activation of specific mRNAs, such as the transcriptional activator ATF4, and hence allowing ATF4-mediated reprogramming of amino acid biosynthetic gene expression to alleviate nutrient depletion. Binds uncharged tRNAs (By similarity). Involved in cell cycle arrest by promoting cyclin D1 mRNA translation repression after the unfolded protein response pathway (UPR) activation or cell cycle inhibitor CDKN1A/p21 mRNA translation activation in response to amino acid deprivation (PubMed:26102367). Plays a role in the consolidation of synaptic plasticity, learning as well as formation of long-term memory. Plays a role in neurite outgrowth inhibition. Plays a proapoptotic role in response to glucose deprivation. Promotes global cellular protein synthesis repression in response to UV irradiation independently of the stress-activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK) and p38 MAPK signaling pathways (By similarity). Plays a role in the antiviral response against alphavirus infection; impairs early viral mRNA translation of the incoming genomic virus RNA, thus preventing alphavirus replication (By similarity).
(Microbial infection) Plays a role in modulating the adaptive immune response to yellow fever virus infection; promotes dendritic cells to initiate autophagy and antigene presentation to both CD4(+) and CD8(+) T-cells under amino acid starvation (PubMed:24310610).
Catalytic Activity
ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]
ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]
Subunit
Homodimer; homodimerization is important for kinase activation by uncharged tRNAs (By similarity). Interacts with GCN1; this interaction stimulates EIF2AK4/GCN2 kinase activity and is impaired by IMPACT upon a variety of stress conditions, such as amino acid depletion, UV-C irradiation, proteasome inhibitor treatment and glucose deprivation (PubMed:24333428). Interacts with DNAJC3; this interaction inhibits EIF2AK4/GCN2 kinase activity during endoplasmic reticulum (ER), hypothermic and amino acid-starving stress conditions (PubMed:25329545).
Homodimer; homodimerization is important for kinase activation by uncharged tRNAs. Interacts with GCN1; this interaction stimulates EIF2AK4/GCN2 kinase activity and is impaired by IMPACT upon a variety of stress conditions, such as amino acid depletion, UV-C irradiation, proteasome inhibitor treatment and glucose deprivation. Interacts with DNAJC3; this interaction inhibits EIF2AK4/GCN2 kinase activity during endoplasmic reticulum (ER), hypothermic and amino acid-starving stress conditions.
Similarity
Belongs to the protein kinase superfamily. Tyr protein kinase family.
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. GCN2 subfamily.
Keywords
3D-structure   Acetylation   Activation of host autophagy by virus   Activator   Adaptive immunity   Alternative splicing   Antiviral defense   ATP-binding   Cell cycle   Coiled coil   Complete proteome   Cytoplasm   Differentiation   Direct protein sequencing   Growth arrest   Host-virus interaction   Immunity   Kinase   Neurogenesis   Nucleotide-binding   Phosphoprotein   Reference proteome   Repeat   RNA-binding   Stress response   Transferase   Translation regulation   tRNA-binding   Disease mutation   Polymorphism  
Feature
chain  eIF-2-alpha kinase GCN2
splice variant  In isoform 5.
sequence variant  In dbSNP:rs35509999.
EC Number
2.7.11.1
EMBL
BABH01025161    BABH01025162    BABH01025163    BABH01025164    NWSH01000660    PCG74957.1    + More
AGBW02008725    OWR52683.1    ODYU01001427    SOQ37598.1    KZ149903    PZC78444.1    RSAL01000009    RVE53876.1    NNAY01002415    OXU21328.1    KQ980629    KYN15001.1    KQ976600    KYM79468.1    ADTU01010273    GEZM01050768    JAV75394.1    GBYB01001982    JAG71749.1    KQ971352    EFA06330.1    GBYB01004674    JAG74441.1    NEVH01019373    PNF22671.1    JH431312    CM004480    OCT68625.1    GEZM01050759    JAV75409.1    AAMC01063663    AAMC01063664    AAMC01063665    GFDL01013422    JAV21623.1    AERX01018652    AERX01018653    CP012526    ALC47839.1    AANG04001761    CM001259    EHH27200.1    AHZZ02030793    AHZZ02030794    AQIB01116350    AQIB01116351    AQIB01116352    NDHI03003524    PNJ27389.1    AAWZ02022551    QUSF01000004    RLW10462.1    CABD030095524    AJFE02093060    AJFE02093061    AJFE02093062    AJFE02093063    AJ243533    AF193342    AF193343    AF193344    AK011380    AK013758    AK077199    AL929163    BC023958    BC072637    AK129334    AC012377    AC025168    BC009350    BC078179    AB037759    AL137627    AL157497    AL832907    AK027011    AJ243428    AACZ04038090    AACZ04038091    GABC01006885    GABC01006884    GABC01006883    GABC01006882    GABC01006881    GABD01001668    GABD01001667    GABD01001666    GABD01001665    GABE01005382    GABE01005381    GABE01005380    GABE01005379    GABE01005378    GABE01005377    GABE01005376    NBAG03000046    JAA04453.1    JAA31432.1    JAA39357.1    PNI94271.1    GL732530    EFX86379.1    CAAE01015019    CAG10683.1    GAMS01003843    GAMS01003842    GAMR01003306    GAMP01004630    GAMP01004629    JAB19293.1    JAB30626.1    JAB48126.1    U80223    AAC47516.1    MUZQ01000033    OWK61992.1    GAMT01004457    JAB07404.1    AE014297    BT126024    AAF57150.1    ADY17723.1    AGB96520.1    KB031042    ELK05554.1    AF056302    AAC13490.1    CH480819    EDW53631.1    ABQF01002671    PNI94270.1    AGB96521.1    GDIP01052237    JAM51478.1    HADX01010885    SBP33117.1    GDIP01175913    JAJ47489.1    GDIP01107721    LRGB01002384    JAL95993.1    KZS07872.1    GDIP01199861    JAJ23541.1    GDIP01230861    JAI92540.1    GDIP01118422    JAL85292.1    AGCU01123582    AGCU01123583    AGCU01123584    AGCU01123585    AGCU01123586    AGCU01123587    AGCU01123588    AGCU01123589    AGCU01123590    GDIP01081127    JAM22588.1    AAKN02015867    AAKN02015868    GDIP01232108    JAI91293.1    KL477821    KFO06939.1    GDIP01069926    JAM33789.1    GDIP01041532    JAM62183.1    KL371374    KFP80691.1    GDIP01078626    JAM25089.1    GDIQ01004420    JAN90317.1    HADW01019971    SBP21371.1    KK501012    KFP12093.1    GDIP01168263    JAJ55139.1    CP026259    AWP16645.1    AGTP01002143    AGTP01002144    AGTP01002145    AGTP01002146    AGTP01002147    AGTP01002148    AGTP01002149    AGTP01002150    GCES01073633    JAR12690.1    AYCK01003405    GDIP01212369    JAJ11033.1    GDIP01167415    JAJ55987.1    GCES01165192    JAQ21130.1    AKCR02000005    PKK31430.1   
Pfam
PF05773   RWD        + More
PF13393   tRNA-synt_His
PF00069   Pkinase
PF12745   HGTP_anticodon2
Interpro
IPR041715   HisRS-like_core        + More
IPR020635   Tyr_kinase_cat_dom       
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR000719   Prot_kinase_dom       
IPR011009   Kinase-like_dom_sf       
IPR006575   RWD-domain       
IPR016255   Gcn2       
IPR008266   Tyr_kinase_AS       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR036621   Anticodon-bd_dom_sf       
IPR001611   Leu-rich_rpt       
IPR024435   HisRS-related_dom       
IPR006195   aa-tRNA-synth_II       
SUPFAM
SSF56112   SSF56112        + More
SSF54495   SSF54495       
Gene 3D
PDB
1ZYD     E-value=4.18024e-42,     Score=437

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
1564
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.08324
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00157
outside
1  -  1564
 
 

Population Genetic Test Statistics

Pi
187.810526
Theta
163.054302
Tajima's D
0.693894
CLR
0.280569
CSRT
0.574621268936553
Interpretation
Uncertain
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