Gene

KWMTBOMO15010

Pre Gene Modal

BGIBMGA004795

Annotation

PREDICTED:_sodium/calcium_exchanger_2_[Bombyx_mori]

Location

Bomo_Chr25(+):2328822-2337729      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.169

CDS

ATGATAGTCTCTCTCCATTTCCAAAAGTCCCTTACCATCGATAACGATGATTCGAATACTGGTACCGAAGCCAACCATCTCGCAACGCTGCCGGAAGAGGAAGCAGTAGTCGCCATGATGGGACTCCCTAAAGCCGGGGAAATCACACGAGCGCAGCTTAGGATCAAGGAGAGCAAAGAGTTTAAGAACACAGTAGACAAATTGGTGCAAAGAGCGAACGCGTCTATAATCATAGGAACGTCTTCATGGAAGGAGCAATTCGCGGAAGCCTTAACCGCCAATTCAGGTTCAGACGACCCAGACGAGCCTCCTTCGTGCTTTGACTACGTTCTCCACGTGGTCACTTTGTTCTGGAAAATCATATTCGCTTTGATACCACCGACAGACATCGGCGGTGGCTACGTCTGCTTTGTGGTTTCGATAATTTGCATCGGCCTGGTGACGGCTGTGATTGGAGATGTCGCGTCACACTTCGGCTGTACTCTTGGCATCAAGGATTCTGTCACAGCCATCGTATTTGTGGCTTTGGGCACGAGTATTCCTGACACGTTTGCGAGTAAAGTGGCCGCTATCCAAGATAAGCACGCGGATGCTTCTGTTGGCAACGTGACCGGCTCTAATGCTGTGAACGTATTCCTTGGTATCGGCGTCGCGTGGACGGTGGCCGCCATCTTCCACTGGAGTAAGAACGAGAAGTTCCACGTGGACCCTGGGAACCTAGCCTTCAGCGTCACGATGTTCTGCTCGGAAGCCGCTCTAGCTGTCCTTGTCCTGGTGCTGAGAAGACGTCGAAGTATTGGCGGGGAGCTCGGCGGACCACGCGGCATCAAGATCGTAACTTCCATGTTCTTCTTTTCCCTGTGGCTAATCTATCTAATCATGTCTGGCTTGGAAGCCTATGACGTCATAGAAGGTTTTTGA

Protein

MIVSLHFQKSLTIDNDDSNTGTEANHLATLPEEEAVVAMMGLPKAGEITRAQLRIKESKEFKNTVDKLVQRANASIIIGTSSWKEQFAEALTANSGSDDPDEPPSCFDYVLHVVTLFWKIIFALIPPTDIGGGYVCFVVSIICIGLVTAVIGDVASHFGCTLGIKDSVTAIVFVALGTSIPDTFASKVAAIQDKHADASVGNVTGSNAVNVFLGIGVAWTVAAIFHWSKNEKFHVDPGNLAFSVTMFCSEAALAVLVLVLRRRRSIGGELGGPRGIKIVTSMFFFSLWLIYLIMSGLEAYDVIEGF

Similarity

Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.

Uniprot

H9J5K5   A0A2A4K7T9   A0A2W1BTN1   A0A3S2TSG4   A0A194PLS1   A0A0L7LDH1   + More
E9J4G5   A0A340TBD3   A0A1L8DFA0   A0A1Q3FVG2   A0A1Q3FVJ1   E2BQW7   A0A1Y1NDC9   F4X5U0   E2A904   N6TK22   A0A1I8Q2V1   A0A151ISW7   U4UFD0   A0A1W4WH66   A0A1W4W6T8   A0A1A9YLF1   A0A0K8W5L6   A0A1B0BG51   A0A3L8DJC3   A0A026WFF4   A0A195D775   A0A0A1XAD6   A0A1Y1NCB8   A0A151WVJ6   A0A158NME2   A0A151JX34   A0A151I3A1   D6WRH9   T1PCS8   T1PL58   W8AQ93   W8AL91   A0A1I8M5B8   B0WFB5   A0A067RIB9   A0A182K3A9   A0A182T391   A0A1B0GG32   Q7QCY1   A0A182RQ24   A0A154P3C3   A0A182LGC3   K7J312   A0A0C9QG73   K7J313   A0A182XHL8   A0A182HTS4   A0A182TX31   A0A182R083   V9IHT9   A0A182J9S9   A0A1B0CRK4   A0A194RHJ1   A0A182FR16   A0A0A1WL41   A0A0L7QTV0   A0A034VRI2   A0A034VUX1   A0A034VVP4   A0A034VVP9   A0A182VDX8   A0A088AB77   A0A084VDR1   A0A1J1IYD1   A0A1S3PGE9   A0A3B4VL73   A0A060VZ30   A0A1S3L856   A0A3B4VNN4   A0A3B4VJY0   A0A1A9VQY0   A0A3P9NCJ6   A0A1I8NE62   A0A3P9NCG5   A0A060W262   A0A0S7L156   A0A3N0YNZ1   A0A3B5PYK3   M4AMU3   A0A3B5RB01   A0A182XW68   A0A3B5PRY8   A0A1A8S554   B7QAE5   A0A3B5LSV5   A0A0F8CHZ0   A0A286YBI0   F6PC65   F1R4F4   Q32SG8   A0A023GL62   G3Q8Q6   G3Q8Q8   G3Q8Q4  

Pubmed

19121390    28756777    26354079    26227816    21282665    20798317    + More
28004739    21719571    23537049    30249741    24508170    25830018    21347285    18362917    19820115    24495485    25315136    24845553    12364791    14747013    17210077    20966253    20075255    25348373    24438588    24755649    23542700    25244985    25835551    23594743    16314583   

EMBL

BABH01025171    BABH01025172    NWSH01000067    PCG79998.1    KZ149903    PZC78442.1    + More
RSAL01000009    RVE53873.1    KQ459604    KPI92055.1    JTDY01001560    KOB73527.1    GL768105    EFZ12262.1    GFDF01009070    JAV05014.1    GFDL01003613    JAV31432.1    GFDL01003612    JAV31433.1    GL449813    EFN81921.1    GEZM01009896    JAV94236.1    GL888742    EGI58180.1    GL437703    EFN70103.1    APGK01035299    APGK01035300    APGK01035301    KB740923    ENN78253.1    KQ981061    KYN09979.1    KB632333    ERL92684.1    GDHF01021444    GDHF01016744    GDHF01016472    GDHF01005967    JAI30870.1    JAI35570.1    JAI35842.1    JAI46347.1    JXJN01013746    QOIP01000007    RLU20273.1    KK107238    EZA54840.1    KQ976750    KYN08707.1    GBXI01006602    JAD07690.1    GEZM01009898    JAV94235.1    KQ982701    KYQ51930.1    ADTU01020397    ADTU01020398    ADTU01020399    ADTU01020400    ADTU01020401    ADTU01020402    ADTU01020403    ADTU01020404    ADTU01020405    KQ981655    KYN38614.1    KQ976507    KYM82810.1    KQ971351    EFA06448.1    KA645935    AFP60564.1    KA649454    AFP64083.1    GAMC01019902    JAB86653.1    GAMC01019903    JAB86652.1    DS231916    EDS26132.1    KK852489    KDR22763.1    CCAG010016049    CCAG010016050    CCAG010016051    CCAG010016052    CCAG010016053    CCAG010016054    CCAG010016055    CCAG010016056    CCAG010016057    CCAG010016058    AAAB01008859    EAA07757.5    KQ434809    KZC06347.1    GBYB01002434    JAG72201.1    APCN01000584    AXCN02000323    JR048215    AEY60600.1    AJWK01024885    KQ460205    KPJ16790.1    GBXI01015169    JAC99122.1    KQ414741    KOC61984.1    GAKP01013031    JAC45921.1    GAKP01013040    JAC45912.1    GAKP01013037    JAC45915.1    GAKP01013032    JAC45920.1    ATLV01011656    KE524705    KFB36105.1    CVRI01000064    CRL05221.1    FR904289    CDQ57590.1    FR904378    CDQ61358.1    GBYX01189676    JAO83286.1    RJVU01035178    ROL47925.1    HAEH01021661    SBS12688.1    ABJB010138373    ABJB010187835    ABJB010429149    ABJB010530579    ABJB010602692    ABJB010799643    ABJB010984590    DS894052    EEC15817.1    KQ040884    KKF33439.1    CR556713    CR848823    AY934775    AAY18210.1    GBBM01001863    JAC33555.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000037510    UP000075920    + More
UP000008237    UP000007755    UP000000311    UP000019118    UP000095300    UP000078492    UP000030742    UP000192223    UP000092443    UP000092460    UP000279307    UP000053097    UP000078542    UP000075809    UP000005205    UP000078541    UP000078540    UP000007266    UP000095301    UP000002320    UP000027135    UP000075881    UP000075901    UP000092444    UP000007062    UP000075900    UP000076502    UP000075882    UP000002358    UP000076407    UP000075840    UP000075902    UP000075886    UP000075880    UP000092461    UP000053240    UP000069272    UP000053825    UP000075903    UP000005203    UP000030765    UP000183832    UP000087266    UP000261420    UP000193380    UP000078200    UP000242638    UP000002852    UP000076408    UP000001555    UP000261380    UP000000437    UP000007635   

PRIDE

H9J5K5   

Pfam

PF01699   Na_Ca_ex        + More
PF16494   Na_Ca_ex_C
PF03160   Calx-beta

Interpro

IPR004837   NaCa_Exmemb        + More
IPR004836   Na_Ca_Ex       
IPR038081   CalX-like_sf       
IPR032452   Na_Ca_Ex_C-exten       
IPR003644   Calx_beta       

SUPFAM

SSF141072   SSF141072       

Gene 3D

2.60.40.2030    

ProteinModelPortal

H9J5K5   A0A2A4K7T9   A0A2W1BTN1   A0A3S2TSG4   A0A194PLS1   A0A0L7LDH1   + More
E9J4G5   A0A340TBD3   A0A1L8DFA0   A0A1Q3FVG2   A0A1Q3FVJ1   E2BQW7   A0A1Y1NDC9   F4X5U0   E2A904   N6TK22   A0A1I8Q2V1   A0A151ISW7   U4UFD0   A0A1W4WH66   A0A1W4W6T8   A0A1A9YLF1   A0A0K8W5L6   A0A1B0BG51   A0A3L8DJC3   A0A026WFF4   A0A195D775   A0A0A1XAD6   A0A1Y1NCB8   A0A151WVJ6   A0A158NME2   A0A151JX34   A0A151I3A1   D6WRH9   T1PCS8   T1PL58   W8AQ93   W8AL91   A0A1I8M5B8   B0WFB5   A0A067RIB9   A0A182K3A9   A0A182T391   A0A1B0GG32   Q7QCY1   A0A182RQ24   A0A154P3C3   A0A182LGC3   K7J312   A0A0C9QG73   K7J313   A0A182XHL8   A0A182HTS4   A0A182TX31   A0A182R083   V9IHT9   A0A182J9S9   A0A1B0CRK4   A0A194RHJ1   A0A182FR16   A0A0A1WL41   A0A0L7QTV0   A0A034VRI2   A0A034VUX1   A0A034VVP4   A0A034VVP9   A0A182VDX8   A0A088AB77   A0A084VDR1   A0A1J1IYD1   A0A1S3PGE9   A0A3B4VL73   A0A060VZ30   A0A1S3L856   A0A3B4VNN4   A0A3B4VJY0   A0A1A9VQY0   A0A3P9NCJ6   A0A1I8NE62   A0A3P9NCG5   A0A060W262   A0A0S7L156   A0A3N0YNZ1   A0A3B5PYK3   M4AMU3   A0A3B5RB01   A0A182XW68   A0A3B5PRY8   A0A1A8S554   B7QAE5   A0A3B5LSV5   A0A0F8CHZ0   A0A286YBI0   F6PC65   F1R4F4   Q32SG8   A0A023GL62   G3Q8Q6   G3Q8Q8   G3Q8Q4  

PDB

3RB7     E-value=1.12199e-13,     Score=185

KEGG

101741376    K05849 solute carrier family 8 (sodium/calcium exchanger) | (RefSeq) sodium/calcium exchanger 2

GO

GO:0005432   GO:0016021   GO:0007154   GO:0045214   GO:0006874   GO:0005623   GO:0008016   GO:0006816   GO:0016020   GO:0003676   GO:0005112   GO:0015930   GO:0055085  

Length:

306

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

116.1982

Exp number, first 60 AAs:

0.00093

Total prob of N-in:

0.48785

inside

1  -  129

TMhelix

130  -  152

outside

153  -  166

TMhelix

167  -  189

inside

190  -  208

TMhelix

209  -  228

outside

229  -  237

TMhelix

238  -  260

inside

261  -  280

TMhelix

281  -  303

outside

304  -  306

 

 

Pi

208.973707

Theta

158.832486

Tajima's D

1.102774

CLR

0.752276

CSRT

0.693615319234038

Interpretation

Uncertain