Gene

KWMTBOMO14999

Annotation

PREDICTED:_cell_growth_regulator_with_RING_finger_domain_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr25(-):2072995-2086241      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.939

CDS

ATGGGTACATCCGGACTGACTCTGGCAGATTTGCCGAACATATTTATTATGATCGGTGCTTTGGTGGCATTGTTTGTGATGCTCGTAATACTGCTCAGGAACATGGAGGTGATAGGCATAGTGGGCGAGGGTAGGGAAGACGCTTGGAGCAGAACAATGCCACCCCCGCGGCTTTTGATGCAAAGGGTACACATACCGTTCACCTTCAAGATCCAGGAAAACGCACCGATTGGCTACAGTGGTAAGTTGTGA

Protein

MGTSGLTLADLPNIFIMIGALVALFVMLVILLRNMEVIGIVGEGREDAWSRTMPPPRLLMQRVHIPFTFKIQENAPIGYSGKL

Uniprot

A0A194RGN4   A0A194PLT5   A0A2A4JV22   A0A2P8Z2R3   E2C2U6   A0A067QU86   + More
A0A0C9QUQ7   A0A3Q0JA63   A0A139WF55   A0A2H8TN24   X1WID2   A0A2S2NWG2   A0A2S2Q864   A0A1Y1NKT2   A0A1B6DC01   A0A1Y1NJL5   A0A1B6KA63   A0A1B6EL43   A0A1B6K4J2   A0A1L8DTF5   F4WHP6   A0A151IBP0   A0A2J7Q3C4   A0A3L8DIV9   A0A3Q0J543   A0A195B4F9   A0A158NM39   A0A151JV04   A0A151XHV4   A0A154P671   A0A0L7RIF3   V9IJH8   A0A088AM22   A0A1L8DT38   A0A3Q0J5B3   A0A0A9XJD5   A0A3Q0J544   A0A1S4F8M2   E1ZUY8   U5EGF5  

Pubmed

26354079    29403074    20798317    24845553    18362917    19820115    + More
28004739    21719571    30249741    21347285    25401762    26823975   

EMBL

KQ460205    KPJ16978.1    KQ459604    KPI92065.1    NWSH01000577    PCG75538.1    + More
PYGN01000223    PSN50770.1    GL452203    EFN77781.1    KK853256    KDR09261.1    GBYB01007489    JAG77256.1    KQ971352    KYB26610.1    GFXV01003585    MBW15390.1    ABLF02027995    ABLF02027997    GGMR01008773    MBY21392.1    GGMS01004725    MBY73928.1    GEZM01001144    GEZM01001143    JAV98118.1    GEDC01014075    JAS23223.1    GEZM01001146    GEZM01001145    JAV98113.1    GEBQ01031641    JAT08336.1    GECZ01031122    JAS38647.1    GECU01001349    JAT06358.1    GFDF01004393    JAV09691.1    GL888167    EGI66253.1    KQ978079    KYM97164.1    NEVH01019069    PNF23067.1    QOIP01000007    RLU20380.1    KQ976604    KYM79383.1    ADTU01020221    ADTU01020222    ADTU01020223    KQ981730    KYN36605.1    KQ982109    KYQ59983.1    KQ434826    KZC07436.1    KQ414584    KOC70609.1    JR048958    AEY60812.1    GFDF01004455    JAV09629.1    GBHO01024676    GBRD01005520    GDHC01002378    JAG18928.1    JAG60301.1    JAQ16251.1    GL434335    EFN74986.1    GANO01003464    JAB56407.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000245037    UP000008237    UP000027135    + More
UP000079169    UP000007266    UP000007819    UP000007755    UP000078542    UP000235965    UP000279307    UP000078540    UP000005205    UP000078541    UP000075809    UP000076502    UP000053825    UP000005203    UP000000311   

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR001841   Znf_RING       

Gene 3D

3.30.40.10    

ProteinModelPortal

A0A194RGN4   A0A194PLT5   A0A2A4JV22   A0A2P8Z2R3   E2C2U6   A0A067QU86   + More
A0A0C9QUQ7   A0A3Q0JA63   A0A139WF55   A0A2H8TN24   X1WID2   A0A2S2NWG2   A0A2S2Q864   A0A1Y1NKT2   A0A1B6DC01   A0A1Y1NJL5   A0A1B6KA63   A0A1B6EL43   A0A1B6K4J2   A0A1L8DTF5   F4WHP6   A0A151IBP0   A0A2J7Q3C4   A0A3L8DIV9   A0A3Q0J543   A0A195B4F9   A0A158NM39   A0A151JV04   A0A151XHV4   A0A154P671   A0A0L7RIF3   V9IJH8   A0A088AM22   A0A1L8DT38   A0A3Q0J5B3   A0A0A9XJD5   A0A3Q0J544   A0A1S4F8M2   E1ZUY8   U5EGF5  

KEGG

105842988    no KO assigned | (RefSeq) cell growth regulator with RING finger domain protein 1-like

GO

GO:0016021  

Length:

83

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.33469

Exp number, first 60 AAs:

20.33393

Total prob of N-in:

0.08330

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  32

inside

33  -  83

 

 

Pi

260.307188

Theta

190.758093

Tajima's D

2.321517

CLR

0.363233

CSRT

0.925153742312884

Interpretation

Uncertain