Pre Gene Modal
BGIBMGA004787
Annotation
PREDICTED:_CAP-Gly_domain-containing_linker_protein_1-like_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.619
Sequence
CDS
ATGGCAAATCGCGATGAACCGATGGATATAGACAGCTTAGAGAGTGATTTTGATAATAAAGAGAATACATATCACAATAATGTGTTACCATGTACAGAGAAAGGATATGAGGAGTTGGATGTGTCAGAACTCAACATGAAATTGAGGTATTCTATAACCCCAGCCGCATCACCTATGTCGAGGAGCTTTACTAACTATACTAGCAATAGAAGCCTTGATAATGATGATTCACTAAATTATTCCAGCAATGAAAATAATTTGACTCGATCTTTAAATTCTAATATATCAAAGAATGAAAATGTGGTAAAATCTCTTAAAACATTGCCTCTCCAGTCACTTCCCACTGACCAAGTAGATCGAATAACAATTTTACAACAGTTGGATAGTGTTGAGTTGACGGGTGATACTCATGATATCACTGTAACTGTTAGTAAAACAAACGATGATGAAAACATATCACTAGCAAGTTCATCATCTTCAGCATTACACAGTCCTGATGCAACAACACCAACAAAAGAACCCGAAAAAAATGAAAATGAATCTCCAATAATGAGAGGTCTCAAGAGCGTACTTAATATTTTTCGTTCTTCACAAAGCCCTATACCCCCTGGAGATAATGATGTGGGATCAAATCAAATTTCACCTAGACTAGAAGAATGTTCAACACCTAAAACTGAAGAGACAACTGACAAGACAGCCTCTGCGTCCACTCCTATCGTAGCTCATAGAAATAAAGATTTAAATATATCCAACAGGAACAGTCCATACAAAGAAAGTGTCACATTTAATGAAGACCTTGAAAAAGAATTACTATGGAAAGACGAAACAACAATATTGTTCAGTCAAGAAAAGATTCCCGTACACAAATTGTTTTTAACTAAAACAACTGAGAGTCAGTTGAAAAATGTAACTGAAACACATAATCAAAATCTAAATAAAACGGTTGAGTATATGGATATGTCGTTCAATGATATGCTGGAAGACAAAACTCTAACTGAATCTGAGAATTTTAAAAATGATTGCAGCACTGTCGAATCTGATAGTGAATTTGTAGATTGTGAGACGACATTTACGAAAGATGAAAACCAAAAAGAAAAAAATAATTTTACTGAAGAACATATGCTAAATGAAACTGTCAACATCTGTGGGACTGACGTTCTTGACAGCTCTGTTATAGAACGAAAACCAGCTCCTGACGAAAGACATCAGAGCAATCTTTTTAATGCAATAAATATTACTGAAAATTCTAATGAAGAGCACTTAAATCACGAAAATGTAGTTCAAATAACACAAATAGGGAGTAAGTTAATTTGCCCAAAAGATTTACAGGATACAATAGCAGTAGATAATATTGCTACAAGTGAAAATCTAGAACACAACTTAGAATTTGAACTAACACAAGATATTTGTATGGATTATGATAAAGCGTATGCAAATAATGAAACCATTTGTGTAGAAGCAGTTGTAGAACAGAATGGAACACAGAGTAAAATAAACGAACAAGTAAATAGAACAGAACATACCCAAGAAAAAGAGTCTACTTCATGTGAGAAAGAAAGTCAATTACTTAAGGAAAGTTCTAGTACAGTAACAGATCTTCCAAATGTTAATGTTACTTGTTTGGGTAATGAAGTAGTGGATGTAACAAATATTGAGGAGAAAATTAAATTACCATGTAAAAGTGAAACAGCTAGTCTATTTCAAATGCTAAAAACAATGCAGGAGACTGATTTTGTAGAAAAAGAATCTGAAGATATTAAAGAAAAGAAAATTCTCTTGGACGAAAGTAATACCATTAATGAGGAAAGTGGCTTTGATTCCTTAGAAAATATCACACCAAAAAATAATGGTTCGACTCCAGTACACGAGTCAAACGAAGAGAAACCTTATGTCTGTGTCACTCCAGAGAACTACATATTAGTTAAAACACCTGGGGCTCCACTTCCTCGATTACCTTCAGACGTACCTTTGCCTGATGAAGATGAAATTGAAAATGACATCACAAAATGTTCAAGATTCCCTAGACCACGTATTGCAGAACTTGATATAATTGATGATATTGAAACAATACAATCTGAAGCCATGGCTTTAATTGATAATGTTGTTAATGAGAAAACAATGTTTTTCCTACAAGAATTTGGAAATAATTTAGATTGTGATATTACTACTTTAGATATTCACTGTGAGAAAAATTTACAAAGCGATGTAAATACTGAAGAACTTAAATTGAATAACATAACAATTAATCAGAAAGCTGAAATGGATAGTACTGTGAAGGAAGAGCAGAATATAAGTGAACAAGATAATATAGAAGGACATCTTGCTGATGTCGTAGAAACAGAACAAGCTCCACAAGTACTACCTGATTTATTGAATGCGACTGCAACCGTTGTGAAAGCAGAGAATTGTAACCAAGAAATTTTGGCTTTATCAGCAAATGAAGTAGCTGATCTTGATGTCACATCTAATGAAGAACAACAGGTCACAAATGAAAATCGAACTAAATTAGACATCACACCTTTTGAAGCTGAGAGTTCTCCAGAAAAACTAAAAGATGCATCTATGTTAGTCAAACATCGAGATCAAAACAATGCAATATACAATGAAAATTCCGACAAAAATGATGAAATAAGTGAACTCACTCTGGTTAATAATGAAATTACGAAACCGATTGATACAACTGAAGCAATTCACGATATTAATATTGTTGACGAAGAAATTAAAAGTATGACTGGTGCAATAAGTGCTCTAGAAGAAATATCTAATGCTAATAGTGTTAGTTCAGAAGTAAAAAGTACGACTGATTCAGCTTGTATGATTGAATCTCAAATAGAGCATAAGCAAAATGTAACACTTGTAAACCAAACATTACTTGCTGAGGAGGACATACACAATGGTAAAAATACGCAATTAAAAGAATCTTCATTAAAACTAGAAATTAACATAGATAGTAAAATGGCTTTAAATGACAACATTTCTACAATAAATTTAAACAAAACTCAAGAATTGGAACTCGGAATGACTAGTGTTAAGACAACTGATGATAATACAGAAATTCCAGAAGTAAAGGAAGGCCTAGTTGATGCTCAAAAAGAAACAGATAACATACAAGGTGAAGTAATGGATGATGAGCTCATAACATCTGAAAATAATAGTCCGTATGTATCAGTAGACTTAGACAAGGTATCCCAAGGTATGCAAAATGAAACAATAGAAAATTTGCCAATAGCAAATTCTCCACCTATCTCTTCTAAAGGATACAACTTCAATTTTGATGACATGGAAGATCCGTTCTCTACGAAGACCAATATTCGAGTATCACCTGCACCAGAAACACCAATTCAAAGTGTAGATAGTAAAACAGATGATAAAAAAATTATTGAACCATTTAAAAAAAGCAATCAGAATAAACGTAAATCGTATTTAGACAGAAAAAGATCTAATTTGAAAAGAAATAGTAAAGCATTTTCGGAGTCATCAATGGATCGTATATCTGATAATATCACTGATCAAAAAGAAATCGAATCAATTTCTCAAATACATTCGTTAGATGTAAATAAAGTCACAAAAGATCTAAATAAAATTCCTAACACAGTTGATGATGAATCAAATCAAACTATAATTAGTGTGGAAACTGTCGTTAAAATTGAAATTCAATCGGAAACCAAAAGCAACGAAGAAAAACCTAAAGACGATGAAATACCTGAAACGAAAAATGAATCTGCTGAACAATGCTATTCTGATGGTTTGAAATCTAGAAACGTTTTCAACTTACCTGAAATTGATGACATGAATTTTAACCCTTTCGTTACAAAATCAAAGATGTGTCAATCGCCACTACCAGTGCATGATGAGAATCCTTTTGCCACGAGAAGTAAAATCCAATCTTCTCCAGATTCATCATTGATGATGCAGCAAGACATTGCTGTGGAAAATGTTGAAATCGCAGAATGTAAACTTGATGGTACGCATTTGATAATGGAAAAAGACTCTGTAGACAAAATGGAAACAGAGGCAATGGAAAAAGACACTTCAGTAAACATAAGTGTTTCGACTTCATCAAAATCAAATGATGATAGTGCTATAACTACAGAAATACATACAGAAGATGAAGACACCATTGAAGGCCCCTTCCTTGAACTCGAAGACGATAATGATGCCAATGCTACTGTGGACCATAAAAGAACAGACATGATGAACTTTAGTGACGCACCGGCAGCAGAGAATGATGAAAATGCTGAAGGTGAATTGTTCATTGATGCGGAAGCCTTTGAGTTCCTCCTCAATCAAAACAAGACGAATGTTGTAGCCGATAGTGGCAAAGAAAGCCTTTTCTTAAAGTTTGATCCTCTGTTCGCTAAACGGATGTCTACAGAAAGTATGGCGGCTGCTCTGCAGAAAATACAACAGAGGCAAAGCACTCCTACTAATAATATAAACACACAAGAAAACTTTACTAATGATGCAGGACTTTCTACCCTCAATGTTACCTTTGAAACGGACTACCATAGCATCACGGGCGACGACCTAAACGTGACTGTTACCAAACCAATGATGGTAGTAACTCCGGCTGTGAACCCCGCGCCTACAAGAAAGTCCACAACTCCTACCAGATCGAACAGACGTTCTATTACATTCACGTCTCCCGCCATGGCCGTTATTGATAGACTTCTCTCTCTTAGTGGCAATAATACTGTCCTCGAACCGGAGCCGACTCAGTTCAGTCCAGAACAATACGAAGCGGACTTAGCACTGACCCAACTTCGCGAAATGTTAGCAGAAAAAGAGACGCACGTTTACAATTTAAGATCGGAGAGCAAAGAGCTTAAAGAGAGATTGACGAATCTAGAATCACAAATGAAAGTTCTAGAAACAGAAGGACAGCAACGGTTGCAAAAGATAAACGATTTGAACGAAAAACTCGCCGAAAAGACTAAAATTAATAAGAGCATGGCGGCAGTCGTTGAAGAATATGAAAGAACGATTGCGAGCCTGATAGCGGATACGGAACAAGACAAGAAACGACACGCAGAAGAACGCATAGCTTTGATTAACGAGAGGGATGAGCAAACTGCTCACTTGGCCAGCATGGAGGTCTCATTCAACGATCTACACAGCAAATACGAAAAAAGTAAACAAGTTATATTGAGTTATAAAGCGAACGAAGAAAAATACAAGAATTCACTGAAAGAAATGGAAGAAAACGTCACGAAAATGCATAAAAATTACGAATTGCTAAAACAGCATGCGACCTCGAAACTAAATCACGCCAACGACGAATTGCAGAGGCTGAACAGATCTCACGAGGCGGAGGTGGTCAAACTAAACGCTATGATCAAACGCAAGGAGCTTCATATAACGTCGCTGGAGGAGACCTTAGCTCAGAAAACTAAGGCGAACGAGGAACTGACCGCGATATGCGACGAACTCATAAACAAAGTCGGCTGA
Protein
MANRDEPMDIDSLESDFDNKENTYHNNVLPCTEKGYEELDVSELNMKLRYSITPAASPMSRSFTNYTSNRSLDNDDSLNYSSNENNLTRSLNSNISKNENVVKSLKTLPLQSLPTDQVDRITILQQLDSVELTGDTHDITVTVSKTNDDENISLASSSSSALHSPDATTPTKEPEKNENESPIMRGLKSVLNIFRSSQSPIPPGDNDVGSNQISPRLEECSTPKTEETTDKTASASTPIVAHRNKDLNISNRNSPYKESVTFNEDLEKELLWKDETTILFSQEKIPVHKLFLTKTTESQLKNVTETHNQNLNKTVEYMDMSFNDMLEDKTLTESENFKNDCSTVESDSEFVDCETTFTKDENQKEKNNFTEEHMLNETVNICGTDVLDSSVIERKPAPDERHQSNLFNAINITENSNEEHLNHENVVQITQIGSKLICPKDLQDTIAVDNIATSENLEHNLEFELTQDICMDYDKAYANNETICVEAVVEQNGTQSKINEQVNRTEHTQEKESTSCEKESQLLKESSSTVTDLPNVNVTCLGNEVVDVTNIEEKIKLPCKSETASLFQMLKTMQETDFVEKESEDIKEKKILLDESNTINEESGFDSLENITPKNNGSTPVHESNEEKPYVCVTPENYILVKTPGAPLPRLPSDVPLPDEDEIENDITKCSRFPRPRIAELDIIDDIETIQSEAMALIDNVVNEKTMFFLQEFGNNLDCDITTLDIHCEKNLQSDVNTEELKLNNITINQKAEMDSTVKEEQNISEQDNIEGHLADVVETEQAPQVLPDLLNATATVVKAENCNQEILALSANEVADLDVTSNEEQQVTNENRTKLDITPFEAESSPEKLKDASMLVKHRDQNNAIYNENSDKNDEISELTLVNNEITKPIDTTEAIHDINIVDEEIKSMTGAISALEEISNANSVSSEVKSTTDSACMIESQIEHKQNVTLVNQTLLAEEDIHNGKNTQLKESSLKLEINIDSKMALNDNISTINLNKTQELELGMTSVKTTDDNTEIPEVKEGLVDAQKETDNIQGEVMDDELITSENNSPYVSVDLDKVSQGMQNETIENLPIANSPPISSKGYNFNFDDMEDPFSTKTNIRVSPAPETPIQSVDSKTDDKKIIEPFKKSNQNKRKSYLDRKRSNLKRNSKAFSESSMDRISDNITDQKEIESISQIHSLDVNKVTKDLNKIPNTVDDESNQTIISVETVVKIEIQSETKSNEEKPKDDEIPETKNESAEQCYSDGLKSRNVFNLPEIDDMNFNPFVTKSKMCQSPLPVHDENPFATRSKIQSSPDSSLMMQQDIAVENVEIAECKLDGTHLIMEKDSVDKMETEAMEKDTSVNISVSTSSKSNDDSAITTEIHTEDEDTIEGPFLELEDDNDANATVDHKRTDMMNFSDAPAAENDENAEGELFIDAEAFEFLLNQNKTNVVADSGKESLFLKFDPLFAKRMSTESMAAALQKIQQRQSTPTNNINTQENFTNDAGLSTLNVTFETDYHSITGDDLNVTVTKPMMVVTPAVNPAPTRKSTTPTRSNRRSITFTSPAMAVIDRLLSLSGNNTVLEPEPTQFSPEQYEADLALTQLREMLAEKETHVYNLRSESKELKERLTNLESQMKVLETEGQQRLQKINDLNEKLAEKTKINKSMAAVVEEYERTIASLIADTEQDKKRHAEERIALINERDEQTAHLASMEVSFNDLHSKYEKSKQVILSYKANEEKYKNSLKEMEENVTKMHKNYELLKQHATSKLNHANDELQRLNRSHEAEVVKLNAMIKRKELHITSLEETLAQKTKANEELTAICDELINKVG
Summary
Uniprot
ProteinModelPortal
PDB
5LXO
E-value=2.72034e-05,
Score=120
Ontologies
GO
Topology
Length:
1815
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1 - 1815
Population Genetic Test Statistics
Pi
26.562633
Theta
26.313025
Tajima's D
0.141241
CLR
1.125184
CSRT
0.409129543522824
Interpretation
Uncertain
