Silkworm Genome Informatics Database

Gene

KWMTBOMO14987 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004882

Annotation

bmp-2_protein_[Bombyx_mori]

Location

Bomo_Chr25(-):1878547-1881856 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.116

CDS

ATGGTGCCGCAAACGAAGGTGTTCGTCGGCAGCCTGCCGCAGGGCTCCAAACCGGAGGACCTAAGAAAGCTGTTTGAGCGTTTCGGCGTCGTCACAGAGTGTGATATAATGAACCGGTGCGGGTTCGTGCATATGCAGACAGAGGAACAAGCGGCAGCGGCGATTCGCGCGCTTCATAACTCTACATTTAACGGCGGCGTTATATCCGTGGAGCGCGGTCGCATCAAAGAACGCGGGCAGCGTGGGGGCGGTCGCGGTGGACGAGGTTCCATGCGCGGTGGCATGGAGCGTCGCGGAGGCGGCCCCGTGCGACACGCGCCCCCGCCTCGGGACGCACCATACATGAGGGACCGGCCAGGTCCGGTGCGCGGCTACGAACGCGGTCCGCCGGCGGCGCCCTATGACGAGCGCTATGCGTACGGCGAGGACCGGCGTGGGTTCGCGCTGATGGATCGCGGCCCTAGGGACGCTTATGCACCGCCGGCGCCTGCTTACCCTGACGAACGCTACCAGAATCACATCTCAGTGGTGGAGGGTACGCGACGTTACGATGAGCCTCCCTATGACGACCGCCACTACGACGAGCGCGCACAGTATGAACGCCCGAGACCTGCTCACCACATACCTAACGGGGACATGTACAGCCGAAGATCACCTGCCCCCATGTATTCCGGGCGTGGAGGTCCAGCTCCAGTGGCCGGAGGTTACGAGAGAGATCACTATGTACCACAATACATGCAACCTCCATTGGGACGGATCTGGTGA

Protein

MVPQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGGVISVERGRIKERGQRGGGRGGRGSMRGGMERRGGGPVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALMDRGPRDAYAPPAPAYPDERYQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYVPQYMQPPLGRIW

Uniprot

H9J5U1 Q1G0N2 B9VTS2 A0A194RGP3 A0A194PFD3 A0A212EUZ4 + More
S4PDL3 A0A2H1V535 S4PCZ2

Pubmed

19121390 26354079 22118469 23622113

EMBL

BABH01025237 BABH01025238 DQ534196 ABF60228.1 FJ602782 ACM24348.1 + More
KQ460205 KPJ16988.1 KQ459604 KPI92076.1 AGBW02012265 OWR45312.1 GAIX01003631 JAA88929.1 ODYU01000712 SOQ35938.1 GAIX01003876 JAA88684.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000007151

PRIDE

H9J5U1 Q1G0N2 B9VTS2

Pfam

PF00076 RRM_1

Interpro

IPR035979   RBD_domain_sf        + More
IPR000504   RRM_dom
IPR012677   Nucleotide-bd_a/b_plait_sf

SUPFAM

SSF54928 SSF54928

Gene 3D

3.30.70.330

ProteinModelPortal

H9J5U1 Q1G0N2 B9VTS2 A0A194RGP3 A0A194PFD3 A0A212EUZ4 + More
S4PDL3 A0A2H1V535 S4PCZ2

PDB

2DNQ E-value=9.32926e-11, Score=158

KEGG

733059 no KO assigned | (RefSeq) Bmp-2, rrm; bmp-2 protein

GO

GO:0003723 GO:0003676 GO:0000166 GO:0016787 GO:0030163 GO:0008138 GO:0035091 GO:0007154 GO:0016020 GO:0005112 GO:0015930

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00153

Exp number, first 60 AAs:

0.00071

Total prob of N-in:

0.03101

outside

1 - 254

Pi

29.367982

Theta

23.458271

Tajima's D

1.256345

CLR

0.665475

CSRT

0.732713364331783

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
26822097	AIHNSTFNGGVISVER	100.00	2e-06
28556443	GPPAAPYDER	100.00	2e-04
28556443	NISFTVWDVGGQDK	100.00	2e-04
27102218	YQNHISVVEGTR	100.00	8e-04

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics