Gene

KWMTBOMO14986

Pre Gene Modal

BGIBMGA004783

Annotation

PREDICTED:_tubulin_polyglutamylase_ttll-4_[Bombyx_mori]

Location

Bomo_Chr25(+):1858437-1871696      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.679

CDS

ATGAGAAAGAATTATGACGAAGCTACGACAAATGATAAGGACAACGACAAGGATGGTTCCATATCTGACTGGGTTTCGGGGGGTCCGTTCGGCTCGAAAGGAGCGGTACTGGTCTTCCGATCATGTGTCCTAGCCTCTAGAACTCCTTCAATGGAGTCTACCACAAAAACCGTTGGTAACAACACTGGAACGTCTATCTTATTGAATAAGGCCAAGAATATGGCGAGGAGACTGGTCGCAGAGCCCCATTCGTTTAGCGTTAGACCTAAGAATGTAATGCACGATGTTATGGAGACTTTTGGGAATAGCAATAAATACACAGGCCAAGCAATAGTAGTGAGACACGTTAGTGAAGCGGAATTACCTAAGACTGAGTCGGTGGCGGAGCAAGGACACGAACCGGCCGAACACAAACGGGACATCCAGGACGTTCTAAACGATTTAAGCAAGATAACTCTGAAGAAACATCTGAATATCGAGAACACGACAGCACAGATAAAGCCACCTGAAGACCCCCCACCGAAAGATGATGATGATAAGAAGTCGAAAAAGATCAGAGCGAAAAGCAAACGCAAGACTCAGATACAGCGCTCCGTGTCGCCGGTGCTGGAGAGTGAGGACTCCGAACATTTGCTAGTCAAAGACGTCGACAGTATCAAGGTATTAGAAAGCACCCACATGCCGGCCCGTCTCCTCAAGATAACCTACAAGCTGGTCAACACGGAGACGAAGCTGCTGCAGAGGCTACTACAGGCCCACGGACTGCAGGAGACGACTATAGACTCCAAAGACTTCAATCTATTGTGGTCGGGCTTGCATCCCAAACCTGACGTGTTACGGTCTTTGTCGCCATACCAAAGGGTGAACCATTTTCCTAGGTCGTACGAGTTGACCCGCAAAGACAAGCTGTTCAAGAACATCGAGAAGATGCAGTACTTCCGCGGCCTGAAGCACTTCGACTTCATACCGACCACGTTCCTTATGCCGGCGGAGTACAAGGAGCTTTGCACCACGCACTACAGGACGAAGGGACCCTGGATCGTGAAGCCGGCTGCCTCCAGCCGAGGTCGCGGCATTTACATCGTCAACACGCCAGAACAGATACCGAAGGGCGAAAACGTGGTGGTAGCGAAGTATATAGACAAGCCCCTCCTCATAGGGGGCCACAAGTGCGACCTCCGCCTGTACGTGTGCGTGACCTCGATGGACCCCCTCCTCATTTACTTGTACGAGGAGGGCCTGGTCAGGTTCGCCGCCGTCAAGTACGACCACACCAACAAGAACCTGTGGAACCCGTGCATGCATCTCTGCAACTACAGCATCAATAAGTACCACACGGATTACATTAAATGCGACGACCCGAACGCTGGCAACATCGGTCACAAGTGGACGCTGTCGGCGCTGCTCCGGCACCTGAGGAAGCAGGGCCGGAACACCACGGCGCTGATGGCCGCCATCGAGGACCTGGTCGTCAAGTCCATACTGTCCTCGGCGCAGACCATCACCGCGGCCGCCAGGGTTTTCGTTCCCAATCACTTTAACTGCTTCGAACTTTTCGGCTACGACATCCTCATAGACGACGTGCTCAAGCCCTGGCTGCTGGAGATCAATCTGTCGCCCAGCCTGGCGTGCGAGAGCCCGCTGGACGCGCGCGTGAAGTCCGCGCTGCTGGCGGACACGCTGACGCTGGTGGGGCTGCCCGCCGTGCCCGCGCCCGCCGACCGCAGCACCTCGCTCAAGATGAGGATCGGCGCCTGTCGGCGCGTGCACTCGGCAGAGAACGTTTGCAACGGCAAGGGCAACGCGGCCGCCCCCGCCCCCGCCCCCGCCGCGGCGGGCGCGCTCAGCGGGGAGGAGGCCCGCCTCGTCAGGGCCGTGAAGGCGCAGTACCAGCGCCGCGGCGGCTTCGTCAGGATCTTTCCGAGCCTCAACTCTTGGCAGAAGTATTCTCAGTACTTGGATCCTGTGTCCGGTGTGCCGGTGTGCTCCACGTCCCTCCGGGGCGGCGGCGGGTACCCCGTGGTGTCCCACAACTACAACCTGGTGCTGCACGCGCATGCACTGCCGCGCACCGCGCCCGCCGCCTGCCTCACGCACACGCCCGCACGGTTAAAGCGTTACGAAGCGGTGAGCGTGACGTCCACGGCGCCGGCCATCAGGCTGTGCGAGCCGGCACCCCCGCCGCAGCACGACGCGCGCCGCGCCAAGGAGCTGGTGCGGGAGCAGCTCGGCGCCGGGATGACGCTCACTACGGGTGAGAGCCGGCGCTTGTTCGGCCTGTACTTGTCGCTGGTGCTCAAGAGGATCACGAGTGCTCACAGCTCGGCTGCGCGACACGCCGCGCTCGTCCTGCGTTTCCTGCGGCGAGCCTCAGCCGCGCTCCGCCTGCCCTACCACGTGCAGGGCCCCCCCGCCAAGATGTGCGACAAGGACCGCTGCGCCGTGATCGCCAAGCAGCTGAACGACTTCCTGTACATGTACCACCGGGAGACGGACCTCTGCACCGACGGCGAGGACCGCGCCGGTCGCGTCTCCAATATACACTTCGCGCAGTTCCTGTCCTCCGCCAGCGAAGCCGACCTGGAAGAGATCCTGCTGCTGGTGCTGAAGACTGACAAGTACACGATCAAGTTTCTGGGCGAGTCCCGGTGCCAGCTGTGCGTGGACATGCCGCCCGACAGGCTGGAGGGCGACGCGTGCCGCCCGCAGAGGCACGCGCTGCTGCGGCACCTCGCCGCGCTCGTGCCGGCCAGCAGCCGCCGCTACAGACCATCAATTGACTCCCAAAGCCGCTCAGAACCGGAGGATCGAGAGCACTCCCCGACCCCCCTCCCGAGCTCCGACATCGTCCTAAAAGAGTCACTCAAAGAAGAAAAACCTTTCACGCAAGCTCTCAAATACGCGAGGTCATAA

Protein

MRKNYDEATTNDKDNDKDGSISDWVSGGPFGSKGAVLVFRSCVLASRTPSMESTTKTVGNNTGTSILLNKAKNMARRLVAEPHSFSVRPKNVMHDVMETFGNSNKYTGQAIVVRHVSEAELPKTESVAEQGHEPAEHKRDIQDVLNDLSKITLKKHLNIENTTAQIKPPEDPPPKDDDDKKSKKIRAKSKRKTQIQRSVSPVLESEDSEHLLVKDVDSIKVLESTHMPARLLKITYKLVNTETKLLQRLLQAHGLQETTIDSKDFNLLWSGLHPKPDVLRSLSPYQRVNHFPRSYELTRKDKLFKNIEKMQYFRGLKHFDFIPTTFLMPAEYKELCTTHYRTKGPWIVKPAASSRGRGIYIVNTPEQIPKGENVVVAKYIDKPLLIGGHKCDLRLYVCVTSMDPLLIYLYEEGLVRFAAVKYDHTNKNLWNPCMHLCNYSINKYHTDYIKCDDPNAGNIGHKWTLSALLRHLRKQGRNTTALMAAIEDLVVKSILSSAQTITAAARVFVPNHFNCFELFGYDILIDDVLKPWLLEINLSPSLACESPLDARVKSALLADTLTLVGLPAVPAPADRSTSLKMRIGACRRVHSAENVCNGKGNAAAPAPAPAAAGALSGEEARLVRAVKAQYQRRGGFVRIFPSLNSWQKYSQYLDPVSGVPVCSTSLRGGGGYPVVSHNYNLVLHAHALPRTAPAACLTHTPARLKRYEAVSVTSTAPAIRLCEPAPPPQHDARRAKELVREQLGAGMTLTTGESRRLFGLYLSLVLKRITSAHSSAARHAALVLRFLRRASAALRLPYHVQGPPAKMCDKDRCAVIAKQLNDFLYMYHRETDLCTDGEDRAGRVSNIHFAQFLSSASEADLEEILLLVLKTDKYTIKFLGESRCQLCVDMPPDRLEGDACRPQRHALLRHLAALVPASSRRYRPSIDSQSRSEPEDREHSPTPLPSSDIVLKESLKEEKPFTQALKYARS

Uniprot

H9J5J3   A0A3S2LU72   A0A2W1BIG7   A0A194RHD4   A0A212EUY1   A0A2H1WKX9   + More
U4U2R8   N6UAV9   A0A1W4X548   A0A1W4X6I0   A0A1Y1M2Y3   A0A1Y1M408   A0A1Y1M6W0   A0A1Y1M570   A0A084VKC1   A0A182ND43   A0A1J1J5U1   A0A1J1J2R5   B4GE23   A0A3B0KC11   Q29CV8   A0A2A3EPX3   B3P6R8   B4PUD4   A0A1I8PWW9   T1PBA0   A0A1I8N6R3   B4JHP2   A0A0K8WAA1   A0A0K8W7E3   B3M265   A0A1W4VL96   B4QUB7  

Pubmed

19121390    28756777    26354079    22118469    23537049    28004739    + More
24438588    17994087    15632085    17550304    25315136   

EMBL

BABH01025239    BABH01025240    BABH01025241    BABH01025242    RSAL01000009    RVE53857.1    + More
KZ150023    PZC74859.1    KQ460205    KPJ16987.1    AGBW02012265    OWR45310.1    ODYU01009335    SOQ53688.1    KB631632    ERL84876.1    APGK01036260    KB740937    ENN77786.1    GEZM01043532    JAV79040.1    GEZM01043537    JAV79035.1    GEZM01043535    JAV79037.1    GEZM01043536    JAV79036.1    ATLV01014176    KE524947    KFB38415.1    CVRI01000066    CRL06257.1    CRL06258.1    CH479182    EDW33858.1    OUUW01000007    SPP83236.1    CH475399    EAL29353.2    KZ288194    PBC33843.1    CH954182    EDV53738.1    CM000160    EDW98821.1    KA645253    AFP59882.1    CH916369    EDV93881.1    GDHF01004340    JAI47974.1    GDHF01019791    GDHF01005258    JAI32523.1    JAI47056.1    CH902617    EDV42256.1    CM000364    EDX14354.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000007151    UP000030742    UP000019118    + More
UP000192223    UP000030765    UP000075884    UP000183832    UP000008744    UP000268350    UP000001819    UP000242457    UP000008711    UP000002282    UP000095300    UP000095301    UP000001070    UP000007801    UP000192221    UP000000304   

PRIDE

H9J5J3   

Pfam

PF03133   TTL        + More
PF00083   Sugar_tr

Interpro

IPR004344   TTL/TTLL_fam        + More
IPR013815   ATP_grasp_subdomain_1       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR005828   MFS_sugar_transport-like       
IPR020846   MFS_dom       

SUPFAM

SSF103473   SSF103473       

Gene 3D

3.30.1490.20    

CDD

cd06174  MFS

ProteinModelPortal

H9J5J3   A0A3S2LU72   A0A2W1BIG7   A0A194RHD4   A0A212EUY1   A0A2H1WKX9   + More
U4U2R8   N6UAV9   A0A1W4X548   A0A1W4X6I0   A0A1Y1M2Y3   A0A1Y1M408   A0A1Y1M6W0   A0A1Y1M570   A0A084VKC1   A0A182ND43   A0A1J1J5U1   A0A1J1J2R5   B4GE23   A0A3B0KC11   Q29CV8   A0A2A3EPX3   B3P6R8   B4PUD4   A0A1I8PWW9   T1PBA0   A0A1I8N6R3   B4JHP2   A0A0K8WAA1   A0A0K8W7E3   B3M265   A0A1W4VL96   B4QUB7  

PDB

4YLS     E-value=2.35584e-51,     Score=515

KEGG

101742089    K16602 tubulin polyglutamylase TTLL5 [EC:6.-.-.-] | (RefSeq) tubulin polyglutamylase ttll-4

GO

GO:0005524   GO:0006464   GO:0016021   GO:0022857   GO:0070740   GO:0018410   GO:0016874   GO:0005737   GO:0016787   GO:0030163   GO:0008138   GO:0035091   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

Length:

970

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0808800000000001

Exp number, first 60 AAs:

0.07372

Total prob of N-in:

0.00388

outside

1  -  970

 

 

Pi

233.327635

Theta

166.56457

Tajima's D

0.459972

CLR

0.488271

CSRT

0.496175191240438

Interpretation

Uncertain