SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14981
Pre Gene Modal
BGIBMGA004780
Annotation
cuticular_protein_hypothetical_33_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.067 Extracellular   Reliability : 1.353
 

Sequence

CDS
ATGATCGCTTTTAAAACAACAGTCGTCCTTCTCTTAGTAGCGCTCGCCAGCGCTCGGCCTTCTGAAGAATGGGAGCCCGAAGGCCACACGCACACAGAACACACGAAGCCGTACCATGTGACCGTGGTGAAGAAGATCGGAGTTCCGATTCCCCATCCGGTGGCTGTGTCGGTCCCGCAGTACGTGAAGGTGCCCATACCTCAACCCTACCCGGTCCACGTCACAGTGGAGCAACCTATCCATGTACCTGTTTATAAGGTTGTCCACCAAGTTGTTGAAAAACCAGTACCGTACACGGTCGAAAAACCAGTGCCCTATGAAGTCGAAAAGCCTTATCCCGTTGAGGTCGAAAAAAAAGTAGAGGTGCCCATCCCTAAGCCCTATCCCGTCCATGTACCCGTGTACAAACACATCTACCACCATAAGGGAGGTAAACACTAA
Protein
MIAFKTTVVLLLVALASARPSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPVYKVVHQVVEKPVPYTVEKPVPYEVEKPYPVEVEKKVEVPIPKPYPVHVPVYKHIYHHKGGKH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.996241
 
 
Length:
146
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00800999999999999
Exp number, first 60 AAs:
0.00794999999999999
Total prob of N-in:
0.14771
outside
1  -  146
 
 

Population Genetic Test Statistics

Pi
163.620455
Theta
193.874464
Tajima's D
-0.475685
CLR
0.175081
CSRT
0.249537523123844
Interpretation
Uncertain
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