Gene

KWMTBOMO14976

Pre Gene Modal

BGIBMGA000752

Annotation

putative_tumor_suppressor_protein?_partial_[Operophtera_brumata]

Location

Bomo_Chr25(-):1274190-1276361      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.153 Mitochondrial   Reliability : 1.652

CDS

ATGACCAGTGTGACTCAAGAAGACTTTGTATTTAAACCTCCTTTAACTCACTGGAGCAAACTTATAAGAGAAGCGGAGAAGATCGTGGGCTATCCGACTTCCTTCATGAATTTGAGGTGGTTGTTAAGCGACGAATTTGCTAATTTGGCCATGCATTTGAGAAAAGTGGTTGGCAGCAATCATCCAATAGTCAAAACTGCTAAAAACTTTTTATACAATGAACACAACAACCTACAGCCATGGGGCCTCATCATTTTATTGCTATCAAAAGCTGTCAGTCCAGAGACTTCATCACTACAAAATTCAGCACTCGCCCAAGATCAAAGGATACTAGCTGAACTCACAGAAATGATTAGAACAGGCCATTATGTCCATCGAGGATTGTTAAACATAGCACCTGATGACCGAGACAGCAGTATGGCCACATCTATGTTCGCAAATAAAATAGCCATTCTCATTGGTGATTATCTACTGGTCACAGCAAACGGTATGCTTGCTAGGCTTAAAAACCAAGATTTATCATACTTGATATCAACAGCATTGAGAGATTTGAGCGAAGGAGAGTTCTTTGGTGAACGGGACAATCAAAACATACCCATACCAGGCAAACCGGTGCCCTTTGAAACTGGAGAGTTCGATATATGCAGTGATACAACACCGTTAAAAGTTAACAATATACTAGGTGAACCAATTCGGGAATGGACTCTGAGAACTATGTTCAATGGGGGTACATTATTGGGCAGAGGTTGTCAAGGCGCATTACTACTTTCAGGAAAAGGTGAAAAAGAACAAGAAATAGCATACAAATTTGGCTGCTATCTCTGTTTAGCATGGCAAGCTTCAGCTGAAATCCAAAAAATAACATCCGATAACAAAGAACATTACTCATTAGTCAGTGCACCAGTTTTGTTTGCTTTACATGAAAACCCTAAATTATACCATGGTCTAGAAAATGCTAAGAGCGTTTCAGACATAGATTTAGACAAATTGAAAGTGGAAATATTGAGAACTAATGCTATAGAACAAACTAGATCACTCTACAGTGAAAATGCTAATAAGGCATTAAACTACATTGAGATGTTTGGTGATTGTGAATCTGTTGATACCATAAAGAAAATGATAAGAACTTTGTAG

Protein

MTSVTQEDFVFKPPLTHWSKLIREAEKIVGYPTSFMNLRWLLSDEFANLAMHLRKVVGSNHPIVKTAKNFLYNEHNNLQPWGLIILLLSKAVSPETSSLQNSALAQDQRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEGEFFGERDNQNIPIPGKPVPFETGEFDICSDTTPLKVNNILGEPIREWTLRTMFNGGTLLGRGCQGALLLSGKGEKEQEIAYKFGCYLCLAWQASAEIQKITSDNKEHYSLVSAPVLFALHENPKLYHGLENAKSVSDIDLDKLKVEILRTNAIEQTRSLYSENANKALNYIEMFGDCESVDTIKKMIRTL

Similarity

Belongs to the FPP/GGPP synthase family.

Uniprot

H9IU22   A0A2W1BIH8   A0A2A4JP78   A0A0L7KNY9   A0A2H1X1J2   A0A212F6G3   + More
A0A194RHT9   A0A194PFE8   A0A2A4JHW0   H9JJP3   A0A194PZG1   A0A194QZK0   A0A212FJR8   A0A2H1VTN4   A0A336K210   A0A0L7K2E9   A0A2A4J107   A0A212FDL4   N6SVZ1   A0A194RB96   A0A1Y9HEW6   A0A182ML90   A0A1Q3FCN9   Q17KC4   A0A1S4EZP3   W5JCC3   A0A182GYG6   A0A1Y1N0V5   B0XA20   A0A2M4BP46   Q2M160   A0A084W0S6   A0A2M4BPK6   A0A182QCJ3   A0A2M4BP09   A0A2M4BN23   B4N3V4   A0A2M4AET4   A0A182FCQ0   A0A2M4BN91   A0A182YCX5   A0A2M4AER4   A0A194Q7W4   A0A182TB49   W8CD48   A0A182K9F5   A0A0M4EDE5   A0A0A1XPK4   A0A3B0JW05   A0A182WKK0   A0A0L7LDG1   B4KWM6   B4GUL6   A0A1B0CLL9   B4J083   B3M6U9   B4PE82   Q9VP87   B3NIU9   B4QJL9   B4IAI9   A0A0J9UQK4   A0A1Y9HEM7   B4IUK0   A0A182NIH7   W5JDV7   A0A034WM77   A0A084W0S5   A0A1W4V9U8   A0A0K8VCT6   A0A182FCQ1   B0XA19   A0A139WI32   A0A182GYG7   A0A182P5L9   A0A182I1R4   B4LHG4   Q7Q671   A0A1A9X0N0   A0A182MCF6   A0A182V0X2   B0XA18   A0A182KPF9   Q17KC3   A0A1W4WH88   A0A1S4EZP8   Q17KC2   A0A182JBB9   A7UU03   A0A182X769   A0A182UCG9   A0A0L0CNU2   A0A0T6B5I1   V5UUA7   A0A2J7QKC5   A0A067QYR7   A0A1B0A6K5   A0A2H8TCK0   J9K7E9   A0A2J7QKD0  

Pubmed

19121390    28756777    26227816    22118469    26354079    23537049    + More
17510324    20920257    23761445    26483478    28004739    15632085    17994087    24438588    25244985    24495485    25830018    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25348373    18362917    19820115    12364791    14747013    17210077    20966253    26108605    24845553   

EMBL

BABH01034256    KZ150023    PZC74869.1    NWSH01000929    PCG73508.1    JTDY01008044    + More
KOB64781.1    ODYU01012287    SOQ58514.1    AGBW02010046    OWR49299.1    KQ460205    KPJ17004.1    KQ459604    KPI92091.1    NWSH01001509    PCG71023.1    BABH01017483    BABH01017484    KQ459593    KPI96545.1    KQ460890    KPJ10968.1    AGBW02008218    OWR53997.1    ODYU01004381    SOQ44201.1    UFQS01000067    UFQT01000067    SSW98956.1    SSX19338.1    JTDY01014553    KOB52020.1    NWSH01004165    PCG65416.1    AGBW02009028    OWR51824.1    APGK01054216    APGK01054217    APGK01054218    KB741248    KB631854    ENN71929.1    ERL86744.1    KQ460416    KPJ14892.1    AXCM01006428    GFDL01009756    JAV25289.1    CH477226    EAT47123.1    ADMH02001837    ETN60973.1    JXUM01021119    KQ560591    KXJ81757.1    GEZM01016911    JAV91048.1    DS232561    EDS43446.1    GGFJ01005580    MBW54721.1    CH379069    EAL30715.1    ATLV01019157    KE525263    KFB43820.1    GGFJ01005859    MBW55000.1    AXCN02000482    GGFJ01005644    MBW54785.1    GGFJ01005271    MBW54412.1    CH964095    EDW79309.2    GGFK01005952    MBW39273.1    GGFJ01005270    MBW54411.1    GGFK01005960    MBW39281.1    KQ459324    KPJ01613.1    GAMC01002571    JAC03985.1    CP012525    ALC43608.1    GBXI01016343    GBXI01001023    JAC97948.1    JAD13269.1    OUUW01000002    SPP76901.1    JTDY01001588    KOB73445.1    CH933809    EDW17473.1    CH479191    EDW26299.1    AJWK01017431    CH916366    EDV95684.1    CH902618    EDV39785.1    CM000159    EDW95095.1    AE014296    AY051597    AAF51668.1    AAK93021.1    CH954178    EDV52595.1    CM000363    EDX11319.1    CH480826    EDW44302.1    CM002912    KMZ00916.1    CH891933    EDX00064.1    ETN60974.1    GAKP01003492    GAKP01003490    JAC55462.1    KFB43819.1    GDHF01015616    JAI36698.1    EDS43445.1    KQ971343    KYB27485.1    JXUM01021120    JXUM01021121    KXJ81758.1    CH940647    EDW68494.1    AAAB01008960    EAA11709.4    EDS43444.1    EAT47124.1    EAT47125.1    EDO63779.1    JRES01000128    KNC33931.1    LJIG01009653    KRT82650.1    KF673862    AHB81558.1    NEVH01013268    PNF29031.1    KK853097    KDR11434.1    GFXV01000039    MBW11844.1    ABLF02016144    PNF29029.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    + More
UP000019118    UP000030742    UP000075900    UP000075883    UP000008820    UP000000673    UP000069940    UP000249989    UP000002320    UP000001819    UP000030765    UP000075886    UP000007798    UP000069272    UP000076408    UP000075901    UP000075881    UP000092553    UP000268350    UP000075920    UP000009192    UP000008744    UP000092461    UP000001070    UP000007801    UP000002282    UP000000803    UP000008711    UP000000304    UP000001292    UP000075884    UP000192221    UP000007266    UP000075885    UP000008792    UP000007062    UP000091820    UP000075903    UP000075882    UP000192223    UP000075880    UP000076407    UP000075902    UP000037069    UP000235965    UP000027135    UP000092445    UP000007819   

PRIDE

H9IU22    H9JJP3    Q9VP87   

Pfam

PF00348   polyprenyl_synt

Interpro

IPR008949   Isoprenoid_synthase_dom_sf        + More
IPR000092   Polyprenyl_synt       
IPR000595   cNMP-bd_dom       

SUPFAM

SSF48576   SSF48576       

Gene 3D

1.10.600.10    

ProteinModelPortal

H9IU22   A0A2W1BIH8   A0A2A4JP78   A0A0L7KNY9   A0A2H1X1J2   A0A212F6G3   + More
A0A194RHT9   A0A194PFE8   A0A2A4JHW0   H9JJP3   A0A194PZG1   A0A194QZK0   A0A212FJR8   A0A2H1VTN4   A0A336K210   A0A0L7K2E9   A0A2A4J107   A0A212FDL4   N6SVZ1   A0A194RB96   A0A1Y9HEW6   A0A182ML90   A0A1Q3FCN9   Q17KC4   A0A1S4EZP3   W5JCC3   A0A182GYG6   A0A1Y1N0V5   B0XA20   A0A2M4BP46   Q2M160   A0A084W0S6   A0A2M4BPK6   A0A182QCJ3   A0A2M4BP09   A0A2M4BN23   B4N3V4   A0A2M4AET4   A0A182FCQ0   A0A2M4BN91   A0A182YCX5   A0A2M4AER4   A0A194Q7W4   A0A182TB49   W8CD48   A0A182K9F5   A0A0M4EDE5   A0A0A1XPK4   A0A3B0JW05   A0A182WKK0   A0A0L7LDG1   B4KWM6   B4GUL6   A0A1B0CLL9   B4J083   B3M6U9   B4PE82   Q9VP87   B3NIU9   B4QJL9   B4IAI9   A0A0J9UQK4   A0A1Y9HEM7   B4IUK0   A0A182NIH7   W5JDV7   A0A034WM77   A0A084W0S5   A0A1W4V9U8   A0A0K8VCT6   A0A182FCQ1   B0XA19   A0A139WI32   A0A182GYG7   A0A182P5L9   A0A182I1R4   B4LHG4   Q7Q671   A0A1A9X0N0   A0A182MCF6   A0A182V0X2   B0XA18   A0A182KPF9   Q17KC3   A0A1W4WH88   A0A1S4EZP8   Q17KC2   A0A182JBB9   A7UU03   A0A182X769   A0A182UCG9   A0A0L0CNU2   A0A0T6B5I1   V5UUA7   A0A2J7QKC5   A0A067QYR7   A0A1B0A6K5   A0A2H8TCK0   J9K7E9   A0A2J7QKD0  

PDB

3AQ0     E-value=2.39618e-19,     Score=235

KEGG

101736885    K12505 decaprenyl-diphosphate synthase subunit 2 [EC:2.5.1.91] | (RefSeq) decaprenyl-diphosphate syn

PATHWAY

00900    Terpenoid backbone biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0016740   GO:0008299   GO:1990234   GO:0005634   GO:0006397   GO:0006396   GO:0003676   GO:0035091   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

Length:

377

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.15444

Exp number, first 60 AAs:

0.00398

Total prob of N-in:

0.10242

outside

1  -  377

 

 

Pi

205.404195

Theta

220.858385

Tajima's D

-0.347021

CLR

5.308014

CSRT

0.27713614319284

Interpretation

Uncertain