Gene

KWMTBOMO14975

Pre Gene Modal

BGIBMGA000823

Annotation

putative_tumor_suppressor_protein_[Danaus_plexippus]

Location

Bomo_Chr25(+):1271382-1272026      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.456

CDS

ATGCTCACGTCTGGAAGTCTACTTGGCAAAGGCTGCCAGGCGGCGACGAAGCTGGCCCATCTCGGGGAAGACGCCGAAAGGAATGCTTACATTTTGGGCGGCCATTTGGCTATAATGTGGCAACTATATTTAGACGTTAAAGACTTTTTCACCCACCCGTATTCATACTCTCTGGTTGGTGCTCCAGTAATCTTTGCCATTTGGGAATACCCAACTATTTACGGTCACATCTTGGAGTCGAAGTTGGAGAGGAAGCCCGTGGAATACAAGCAGTTGTATTACGCTGTAAGAAGTACAAGGTCTTTGGAGTATCTGTGCGTGTTTTTTGAGGAAGAACTGGCTTCAGTTTTGAAGTGTAGCGAGCGGTTCCCGGTGGATGACGCTAGGGTCGCGCTGCAGAAGATGGCGGTGACGATAAGAGATGAGGCCATGGGTTATATTGAAAAGTGA

Protein

MLTSGSLLGKGCQAATKLAHLGEDAERNAYILGGHLAIMWQLYLDVKDFFTHPYSYSLVGAPVIFAIWEYPTIYGHILESKLERKPVEYKQLYYAVRSTRSLEYLCVFFEEELASVLKCSERFPVDDARVALQKMAVTIRDEAMGYIEK

Similarity

Belongs to the FPP/GGPP synthase family.

Uniprot

H9IU93   A0A212F6F0   A0A0L7KNV2   A0A2A4JN95   A0A194RI51   A0A194PFM9   + More
A0A2H1WZN3   A0A2W1BQ68   W8CD48   A0A0L0CNU2   A0A1A9X0N0   A0A1A9UJ74   A0A034WM77   B4N3V4   A0A1B0A6K5   A0A0K8VCT6   B4GUL6   A0A1I8PKI1   Q2M160   A0A1B0FBM7   A0A2A4J107   A0A1A9XJI0   A0A1B0AY55   B4J083   A0A212FDL4   A0A3B0JW05   B4PE82   B3NIU9   A0A0M4EDE5   B4IUK0   A0A0J9UQK4   Q9VP87   B4QJL9   B4IAI9   A0A1I8NIU7   T1PC98   B4LHG4   B3M6U9   A0A1B0CLL9   H9JT20   A0A1W4V9U8   Q17KC3   B4KWM6   A0A1I8QB34   A0A194RB96   U4U1Z8   U4TPP9   A0A0A1XPK4   A0A0L7LLB7   A0A194Q7W4   A0A2M4C5H7   A0A336K210   N6SVZ1   A0A1J1I8A6   A0A2M4BPK6   A0A2M4BP09   A0A084W0S5   A0A084W0S6   A0A2M4BP46   A0A1W4WH88   A0A182TZT9   A0A182GYG7   B0XA19   A0A2M4BN91   A0A2M4BN23   A0A1Y1N0V5   V5UUA7   B0XA18   A0A194PFE8   A0A182JBB9   A0A182TB49   A0A182P5L9   A0A1Y9HEW6   A0A2S2QGI7   A0A182GYG6   J9K7E9   A0A2H8TCK0   M9VRD0   A0A2M4AET4   A0A182V0X2   A0A2M4AER4   A0A194RHT9   A0A182YCX5   A0A2S2P200   Q7Q671   W5JCC3   A0A182KPF9   A0A182I1R4   A0A2S2QNZ5   A0A182NIH7   Q17KC4   A0A182FCQ0   A0A1S4EZP3   A0A084VAU1   A0A336LS10   A0A182S7M9   A0A1Q3FCN9   A0A182GBA4   A0A182K9F5   A0A182ML90  

Pubmed

19121390    22118469    26227816    26354079    28756777    24495485    + More
26108605    25348373    17994087    15632085    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    17510324    23537049    25830018    24438588    26483478    28004739    24246678    25244985    12364791    14747013    17210077    20920257    23761445    20966253   

EMBL

BABH01034256    AGBW02010046    OWR49298.1    JTDY01008044    KOB64780.1    NWSH01000929    + More
PCG73507.1    KQ460205    KPJ17005.1    KQ459604    KPI92092.1    ODYU01012287    SOQ58513.1    KZ150023    PZC74870.1    GAMC01002571    JAC03985.1    JRES01000128    KNC33931.1    GAKP01003492    GAKP01003490    JAC55462.1    CH964095    EDW79309.2    GDHF01015616    JAI36698.1    CH479191    EDW26299.1    CH379069    EAL30715.1    CCAG010008960    NWSH01004165    PCG65416.1    JXJN01005555    CH916366    EDV95684.1    AGBW02009028    OWR51824.1    OUUW01000002    SPP76901.1    CM000159    EDW95095.1    CH954178    EDV52595.1    CP012525    ALC43608.1    CH891933    EDX00064.1    CM002912    KMZ00916.1    AE014296    AY051597    AAF51668.1    AAK93021.1    CM000363    EDX11319.1    CH480826    EDW44302.1    KA646386    AFP61015.1    CH940647    EDW68494.1    CH902618    EDV39785.1    AJWK01017431    BABH01030708    CH477226    EAT47124.1    CH933809    EDW17473.1    KQ460416    KPJ14892.1    KB631048    KB631049    ERL84043.1    ERL84045.1    KB630114    ERL83404.1    GBXI01016343    GBXI01001023    JAC97948.1    JAD13269.1    JTDY01000645    KOB76353.1    KQ459324    KPJ01613.1    GGFJ01011441    MBW60582.1    UFQS01000067    UFQT01000067    SSW98956.1    SSX19338.1    APGK01054216    APGK01054217    APGK01054218    KB741248    KB631854    ENN71929.1    ERL86744.1    CVRI01000043    CRK95970.1    GGFJ01005859    MBW55000.1    GGFJ01005644    MBW54785.1    ATLV01019157    KE525263    KFB43819.1    KFB43820.1    GGFJ01005580    MBW54721.1    JXUM01021119    JXUM01021120    JXUM01021121    KQ560591    KXJ81758.1    DS232561    EDS43445.1    GGFJ01005270    MBW54411.1    GGFJ01005271    MBW54412.1    GEZM01016911    JAV91048.1    KF673862    AHB81558.1    EDS43444.1    KPI92091.1    GGMS01007608    MBY76811.1    KXJ81757.1    ABLF02016144    GFXV01000039    MBW11844.1    KC431244    AGJ83980.1    GGFK01005952    MBW39273.1    GGFK01005960    MBW39281.1    KPJ17004.1    GGMR01010785    MBY23404.1    AAAB01008960    EAA11709.4    ADMH02001837    ETN60973.1    GGMS01010286    MBY79489.1    EAT47123.1    ATLV01004460    ATLV01004461    KE524214    KFB35085.1    SSX19359.1    GFDL01009756    JAV25289.1    JXUM01241826    KQ635302    KXJ62490.1    AXCM01006428   

Proteomes

UP000005204    UP000007151    UP000037510    UP000218220    UP000053240    UP000053268    + More
UP000037069    UP000091820    UP000078200    UP000007798    UP000092445    UP000008744    UP000095300    UP000001819    UP000092444    UP000092443    UP000092460    UP000001070    UP000268350    UP000002282    UP000008711    UP000092553    UP000000803    UP000000304    UP000001292    UP000095301    UP000008792    UP000007801    UP000092461    UP000192221    UP000008820    UP000009192    UP000030742    UP000019118    UP000183832    UP000030765    UP000192223    UP000075902    UP000069940    UP000249989    UP000002320    UP000075880    UP000075901    UP000075885    UP000075900    UP000007819    UP000075903    UP000076408    UP000007062    UP000000673    UP000075882    UP000075884    UP000069272    UP000075881    UP000075883   

PRIDE

H9IU93    Q9VP87    H9JT20   

Pfam

PF00348   polyprenyl_synt

Interpro

IPR000092   Polyprenyl_synt        + More
IPR008949   Isoprenoid_synthase_dom_sf       

SUPFAM

SSF48576   SSF48576       

Gene 3D

1.10.600.10    

ProteinModelPortal

H9IU93   A0A212F6F0   A0A0L7KNV2   A0A2A4JN95   A0A194RI51   A0A194PFM9   + More
A0A2H1WZN3   A0A2W1BQ68   W8CD48   A0A0L0CNU2   A0A1A9X0N0   A0A1A9UJ74   A0A034WM77   B4N3V4   A0A1B0A6K5   A0A0K8VCT6   B4GUL6   A0A1I8PKI1   Q2M160   A0A1B0FBM7   A0A2A4J107   A0A1A9XJI0   A0A1B0AY55   B4J083   A0A212FDL4   A0A3B0JW05   B4PE82   B3NIU9   A0A0M4EDE5   B4IUK0   A0A0J9UQK4   Q9VP87   B4QJL9   B4IAI9   A0A1I8NIU7   T1PC98   B4LHG4   B3M6U9   A0A1B0CLL9   H9JT20   A0A1W4V9U8   Q17KC3   B4KWM6   A0A1I8QB34   A0A194RB96   U4U1Z8   U4TPP9   A0A0A1XPK4   A0A0L7LLB7   A0A194Q7W4   A0A2M4C5H7   A0A336K210   N6SVZ1   A0A1J1I8A6   A0A2M4BPK6   A0A2M4BP09   A0A084W0S5   A0A084W0S6   A0A2M4BP46   A0A1W4WH88   A0A182TZT9   A0A182GYG7   B0XA19   A0A2M4BN91   A0A2M4BN23   A0A1Y1N0V5   V5UUA7   B0XA18   A0A194PFE8   A0A182JBB9   A0A182TB49   A0A182P5L9   A0A1Y9HEW6   A0A2S2QGI7   A0A182GYG6   J9K7E9   A0A2H8TCK0   M9VRD0   A0A2M4AET4   A0A182V0X2   A0A2M4AER4   A0A194RHT9   A0A182YCX5   A0A2S2P200   Q7Q671   W5JCC3   A0A182KPF9   A0A182I1R4   A0A2S2QNZ5   A0A182NIH7   Q17KC4   A0A182FCQ0   A0A1S4EZP3   A0A084VAU1   A0A336LS10   A0A182S7M9   A0A1Q3FCN9   A0A182GBA4   A0A182K9F5   A0A182ML90  

KEGG

101736759    K12505 decaprenyl-diphosphate synthase subunit 2 [EC:2.5.1.91] | (RefSeq) decaprenyl-diphosphate syn

PATHWAY

00900    Terpenoid backbone biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0016740   GO:0008299   GO:1990234  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.08968999999998

Exp number, first 60 AAs:

3.09134

Total prob of N-in:

0.06874

outside

1  -  149

 

 

Pi

200.40117

Theta

151.494466

Tajima's D

0.957903

CLR

0

CSRT

0.650517474126294

Interpretation

Uncertain