Gene

KWMTBOMO14973  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000753

Annotation

PREDICTED:_nuclear_export_mediator_factor_NEMF_homolog_[Papilio_machaon]

Location

Bomo_Chr25(-):1246203-1251001      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.054 Mitochondrial   Reliability : 1.839

CDS

ATGAAGACGAGATTCAATACATACGATATCATATGCATGATCACAGAACTGCAAAGATTGATTGGAATGAGAGTAAACCAGGTTTATGATATAGACAATCGTACGTATGTGATACGTTTGCAGCGATCCGAGGAGAAGAGTGTTTTGTTATTAGAATCTGGTAACAGGTTTCATACAACACAGTTTGAGTGGCCAAAGAATGTCGCTCCCTCAGGGTTCACCATGAAGTTACGTAAACATCTTAAAAATAAGAGACTTGAGAAACTAAGTCAGCTCGGTGTAGATCGTATTGTTGATCTACAGTTTGGATCTGGAGAGGCAGCTTATCATGTCATATTGGAACTGTACGATAGAGGCAACATCATACTAACTGATTCAGAATGGATAATATTAAATGTTTTGAGACCTCATGTTGAAGGAGACAAAATTAGATTTGCAGTGAAAGAAAAATATCCACTAGATAGAGCGAAAACAAACTATGCAGCACCACCCATTGAAGATCTGAAGGATATATTGTTGAGAAGCAAACCTGGTGACAACCTCAAGAAAATATTGAATCCCAACTTAGAATTTGGTTCAGCAATGATAGATCACGTTCTGCTACAGAACAATCTCTCTGGCAACATGAAGATTTCCACAGAACCAGGAAAAGGCTTCCACATAGAACACGATATAGAAAAGCTCGTGAAAGCTCTGAAACAAGCTGAATTACTAATGGATGTTGCTAAGATTGAAGTTGCCAAGGGTTACATAACTCAGAAGAAAGAAGAGCGCCCTAATCCGGAAGGAGAGCCAACGTATTTACTGACGAACATAGAGTTCCATCCGTTAAGATTCGCACAACATGAGAACCTACCGTTTGCCGAGTATGAAACCTTCGATAGGGCTGTCGATGAATTTTTTTCGGCTTCCGAAGGGCAGAAGATTGACATGAAGACCGTACAATTAGAACGCGAAGCTCTGAAGAAGCTGCAGAACGTGCGCAGGGACCACGAGAGGCGCGTGACGGAGCTGGAGCGCGCGCAGACCCGGGACAAGCGCGCCGCCGAGCTCATCGCCAGCAACGAGCCGCTCGTGGAGCGCGCGCGGGCCGCCATACAGACGGCGCTCGCCAACCAGGTAGGCAGCGGCTTGGCTCTGCACCTGGCATTGCTGAAGTCCATGGGCGACGGTAACCACTCACCATCAGGTGGGCCGTATGCTCGTCTGCCTACAAAGGCAATATTTTTTTTTTTAAAAAGCTTGGTCCATACTCCGTAA

Protein

MKTRFNTYDIICMITELQRLIGMRVNQVYDIDNRTYVIRLQRSEEKSVLLLESGNRFHTTQFEWPKNVAPSGFTMKLRKHLKNKRLEKLSQLGVDRIVDLQFGSGEAAYHVILELYDRGNIILTDSEWIILNVLRPHVEGDKIRFAVKEKYPLDRAKTNYAAPPIEDLKDILLRSKPGDNLKKILNPNLEFGSAMIDHVLLQNNLSGNMKISTEPGKGFHIEHDIEKLVKALKQAELLMDVAKIEVAKGYITQKKEERPNPEGEPTYLLTNIEFHPLRFAQHENLPFAEYETFDRAVDEFFSASEGQKIDMKTVQLEREALKKLQNVRRDHERRVTELERAQTRDKRAAELIASNEPLVERARAAIQTALANQVGSGLALHLALLKSMGDGNHSPSGGPYARLPTKAIFFFLKSLVHTP

Uniprot

H9IU23   A0A3S2TEX0   A0A2A4JG44   A0A2H1VNK6   A0A194RHF6   A0A212F6C8   + More
A0A194PHA9   A0A0L7QMD1   E2BDI6   A0A0N0U6K4   A0A2A3EBX4   A0A088A613   A0A195FL30   A0A310SN66   F4X8C7   E9J6A3   A0A195C9I4   A0A151X9K1   E2AR27   K7IQH9   A0A151J9C7   A0A026X1N6   A0A195BEW9   A0A232FHT4   A0A158NC33   A0A1Y1MZR1   A0A0J7KWJ5   A0A154P402   A0A2J7Q643   A0A1B6ILG1   A0A1B6D3Q3   A0A1Y1N191   D6WQE2   A0A067R987   A0A2J7Q635   A0A139WF31   A0A2J7Q646   A0A2M4BBK2   A0A182FQ50   A0A2M4BBL0   A0A2M4BBJ6   A0A2M4AA20   A0A1B6FD40   A0A2M4A9X6   B0X1V4   W5JPE4   A0A1Q3F8M9   A0A182JMM1   E0VUM3   A0A182P3X4   A0A084WR97   A0A182M4G4   A0A182UNT2   Q7PQX6   A0A182HSA6   Q171H5   A0A182XAG7   A0A182LE79   A0A182UA60   A0A1S4FHD0   A0A182Y433   A0A182K4I6   A0A182VZW9   A0A182NR80   A0A182QAN7   A0A182GU85   A0A182HD61   A0A0P6IZE8   A0A336M9G0   A0A182RTH0   U5EX17   U4UEP2   N6TJU6   A0A1L8DH75   A0A1J1J1E8   A0A1B0GDX0   A0A0A1XF25   Q3ZAL4   B3M270   B4KBH4   B4LVP7   T1JGR9   A0A0P5W8H9   A0A1A9XNR2   A0A0M3QYN5   A0A0N8DZL1   B4JHP6   A0A0P5UZW0   A0A1B0BB53   A0A1B0AHD0   A0A0N8BXV0   A0A0P6AZ52   A0A0P6CSC1   A0A0P5LQU9   Q4KLD6   B4PUC9   A0A1A9W2Q3   A0A1A9VLZ7  

Pubmed

19121390    26354079    22118469    20798317    21719571    21282665    + More
20075255    24508170    30249741    28648823    21347285    28004739    18362917    19820115    24845553    20920257    23761445    20566863    24438588    12364791    14747013    17210077    17510324    20966253    25244985    26483478    26999592    23537049    25830018    17994087    18057021    17550304   

EMBL

BABH01034254    RSAL01000216    RVE44123.1    NWSH01001601    PCG70746.1    ODYU01003508    + More
SOQ42386.1    KQ460205    KPJ17007.1    AGBW02010046    OWR49295.1    KQ459604    KPI92094.1    KQ414894    KOC59782.1    GL447645    EFN86238.1    KQ435736    KOX77108.1    KZ288305    PBC28792.1    KQ981491    KYN40972.1    KQ760706    OAD59339.1    GL888932    EGI57136.1    GL768230    EFZ11647.1    KQ978068    KYM97524.1    KQ982373    KYQ57066.1    GL441846    EFN64173.1    KQ979433    KYN21553.1    KK107036    QOIP01000004    EZA61993.1    RLU23568.1    KQ976500    KYM83136.1    NNAY01000172    OXU30326.1    ADTU01011382    GEZM01017489    JAV90648.1    LBMM01002551    KMQ94676.1    KQ434809    KZC06563.1    NEVH01017542    PNF24049.1    GECU01019939    JAS87767.1    GEDC01016977    JAS20321.1    GEZM01017480    JAV90650.1    KQ971354    EFA06958.2    KK852657    KDR19182.1    PNF24046.1    KYB26471.1    PNF24047.1    GGFJ01001284    MBW50425.1    GGFJ01001285    MBW50426.1    GGFJ01001283    MBW50424.1    GGFK01004315    MBW37636.1    GECZ01021633    JAS48136.1    GGFK01004285    MBW37606.1    DS232271    EDS38832.1    ADMH02000547    ETN65986.1    GFDL01011172    JAV23873.1    DS235787    EEB17079.1    ATLV01026002    KE525404    KFB52741.1    AXCM01000275    AAAB01008859    EAA08148.6    APCN01000256    CH477455    EAT40641.1    AXCN02001469    JXUM01018613    KQ560517    KXJ82026.1    JXUM01034057    KQ561010    KXJ80050.1    GDUN01000729    JAN95190.1    UFQS01000752    UFQT01000752    SSX06625.1    SSX26972.1    GANO01000290    JAB59581.1    KB632326    ERL92434.1    APGK01035020    KB740923    ENN78148.1    GFDF01008272    JAV05812.1    CVRI01000066    CRL06269.1    CCAG010012069    GBXI01015217    GBXI01004742    JAC99074.1    JAD09550.1    BT023855    AAZ86776.1    CH902617    EDV42261.1    CH933806    EDW13641.2    KRG00531.1    CH940650    EDW66470.2    JH432211    GDIP01089733    JAM13982.1    CP012526    ALC47929.1    GDIQ01076380    JAN18357.1    CH916369    EDV93885.1    GDIP01122925    JAL80789.1    JXJN01011305    GDIQ01134259    JAL17467.1    GDIP01023257    JAM80458.1    GDIQ01088528    JAN06209.1    GDIQ01174896    JAK76829.1    BC099277    AAH99277.1    CM000160    EDW98816.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000053825    UP000008237    UP000053105    UP000242457    UP000005203    UP000078541    UP000007755    UP000078542    UP000075809    UP000000311    UP000002358    UP000078492    UP000053097    UP000279307    UP000078540    UP000215335    UP000005205    UP000036403    UP000076502    UP000235965    UP000007266    UP000027135    UP000069272    UP000002320    UP000000673    UP000075880    UP000009046    UP000075885    UP000030765    UP000075883    UP000075903    UP000007062    UP000075840    UP000008820    UP000076407    UP000075882    UP000075902    UP000076408    UP000075881    UP000075920    UP000075884    UP000075886    UP000069940    UP000249989    UP000075900    UP000030742    UP000019118    UP000183832    UP000092444    UP000007801    UP000009192    UP000008792    UP000092443    UP000092553    UP000001070    UP000092460    UP000092445    UP000002282    UP000091820    UP000078200   

PRIDE

H9IU23    Q3ZAL4   

Pfam

PF11923   NFACT-C        + More
PF05670   NFACT-R_1

Interpro

IPR021846   NFACT-C        + More
IPR008532   NFACT_RNA-bd       

ProteinModelPortal

H9IU23   A0A3S2TEX0   A0A2A4JG44   A0A2H1VNK6   A0A194RHF6   A0A212F6C8   + More
A0A194PHA9   A0A0L7QMD1   E2BDI6   A0A0N0U6K4   A0A2A3EBX4   A0A088A613   A0A195FL30   A0A310SN66   F4X8C7   E9J6A3   A0A195C9I4   A0A151X9K1   E2AR27   K7IQH9   A0A151J9C7   A0A026X1N6   A0A195BEW9   A0A232FHT4   A0A158NC33   A0A1Y1MZR1   A0A0J7KWJ5   A0A154P402   A0A2J7Q643   A0A1B6ILG1   A0A1B6D3Q3   A0A1Y1N191   D6WQE2   A0A067R987   A0A2J7Q635   A0A139WF31   A0A2J7Q646   A0A2M4BBK2   A0A182FQ50   A0A2M4BBL0   A0A2M4BBJ6   A0A2M4AA20   A0A1B6FD40   A0A2M4A9X6   B0X1V4   W5JPE4   A0A1Q3F8M9   A0A182JMM1   E0VUM3   A0A182P3X4   A0A084WR97   A0A182M4G4   A0A182UNT2   Q7PQX6   A0A182HSA6   Q171H5   A0A182XAG7   A0A182LE79   A0A182UA60   A0A1S4FHD0   A0A182Y433   A0A182K4I6   A0A182VZW9   A0A182NR80   A0A182QAN7   A0A182GU85   A0A182HD61   A0A0P6IZE8   A0A336M9G0   A0A182RTH0   U5EX17   U4UEP2   N6TJU6   A0A1L8DH75   A0A1J1J1E8   A0A1B0GDX0   A0A0A1XF25   Q3ZAL4   B3M270   B4KBH4   B4LVP7   T1JGR9   A0A0P5W8H9   A0A1A9XNR2   A0A0M3QYN5   A0A0N8DZL1   B4JHP6   A0A0P5UZW0   A0A1B0BB53   A0A1B0AHD0   A0A0N8BXV0   A0A0P6AZ52   A0A0P6CSC1   A0A0P5LQU9   Q4KLD6   B4PUC9   A0A1A9W2Q3   A0A1A9VLZ7  

PDB

3J92     E-value=1.48164e-102,     Score=953

KEGG

101736439    no KO assigned | (RefSeq) nuclear export mediator factor NEMF homolog

GO

GO:1990112   GO:0043023   GO:0072344   GO:0000049   GO:1990116   GO:1902167   GO:0006611   GO:0005623  

Length:

419

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03678

Exp number, first 60 AAs:

0.00522

Total prob of N-in:

0.02917

outside

1  -  419

 

 

Pi

25.30161

Theta

26.790139

Tajima's D

-0.260578

CLR

0.205998

CSRT

0.302984850757462

Interpretation

Uncertain