Gene

KWMTBOMO14972  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000753

Annotation

PREDICTED:_nuclear_export_mediator_factor_NEMF_homolog_[Plutella_xylostella]

Location

Bomo_Chr25(-):1235436-1245301      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.702

CDS

ATGTTCATCTACTCTCAGCTGTCATGGGATGACATTCAACTGCTGGTAAAGACGGCCCAGGAGAACAAGGACCCGGTGGCGTCCTGCATCAAGCATCTCAAGCTCAACACCAACCACATTACGCTGCTGCTCTCCGACCCCTACCTTCACGACGAGAAGCCGGAACCAATGATGATCGACATTGACTTGTCATTGACAGCTTTTGCTAATGCTAGGAGGTACTACGACCAAAAGCGAAACGCGGCCAAAAAGCAGCAAAAGACAATCGAATCCTCGGGAAAAGCTCTTAAAAGCGCCGAAAAGAAGACGAAGCAAACTTTGAAGGAAGCTCACACGATCAGCAACATTATAAAGGCTCGGAAAACTTACTGGTTCGAAAAGTTCTACTGGTTTATATCGTCTGATAATTACGTGGTGATAGCCGGCCGCGACCAGCAGCAGAACGAGCTCCTGGTGAAGAGGTACATGAGGGCCGGCGACGTGTACGTGCACGCCGACCTGTCCGGCGCCTCGTCCGTCATCATCAAGAACCCCAGGGGTGGGACCGTCCCGCCCCGGACCCTGTCCGAGGCCGGGCAGGCCGCGGTGGCCTACAGCGTGGCCTGGGAGGCCAAGGTGCTGACCCGGTCGTGGTGGGTGCAGGCCTCGCAGGTCAGCAAGACCGCGCCCTCCGGCGAGTTCCTCACCACCGGCTCCTTCATGATCCGGGGGAAGAAGAACTACTTGCTACCGGAGCATCTGCAGTTCGGCTTCAGTTTCATGTTCCGGGTCGAAGACGGCTGCATAGAGCGGCACCGCGGCGAGCGCCAGCCCCTGGGAGCAGACGAGGAGCCGCCCGCCGCGCCCGGGGACGACGCGGAGGACCAGGAGATAGCCGTGTCTGATGATGACGAGCCGTCGGACAAGGAGGACACTAAAGCAGCGGAAGGTAAGCTGGAAACCATCGCAGAGGAGCCACGCGCGGCCGACCCACCGGACGTGCGTGCAAGCGAGACGGCGATACAGAACGAACGGGACGGCGACACTGAGAGCGACTCGGGCGACGACCTCCCCGACACGCACATAAAGGTCGATCACGGAACGGGACAAGTCATGCTCTCACGGACGACATCGGAAATATCGGAGACGCCTGAAGACAAAGTACCCTCTTTTCCGGCCCTCCCCAAAAAGGGCGGGAAGAAACCACAGAAGAAAGAAGTAAAGGTAAAGGAAGAAGAGAAGAAGGAAGATAAGAAAGACGGACCGAAACGAGGACAGAGGGGGAAGCTAAAGAAGATAAAAGAGAAATATAAGGACCAGGATGAAGACGAGAGACTGTACAAAATGGGATTGTTGCAGGCGGCGAGCAAAATGAAGGAATCGAAAAAAGCGCAGAAGAAAGCAGAGAAACCCGGCAAGAGTAAGAGCCAGCAGCGCGCCAACAAGATCCCCCTCCCGGCGCCGCTCATACTGGAGGCGGAGTCGGAGGAAGAACTCGAGCCGGACCCAGAGGGCGAGCAGCAGCCGGGGCCGGACGCCGACTCGGAGATGCTGCAGCAGCTCACCGGGAGTCCGTTCGCAGACGACGAGCTGCTATTCGCGGTGCCCGTGGTGGCTCCCTACTCCGCGCTCAACCACTACAAGTACAAAGTGAAGCTGACGCCCGGTACCAGCAAGCGAGGCAAGGCCGCGAAGACCGCCATCCAGGTGTTCCTCAAGGAGCCGACGGGGACTCCGCGCGAGAGGGACCTGCTGAAGGCCGTGCGTGATGAGGACGTCGCCAGGAACTTCCCCGGAAAGGTCAAGCTGTCAGCGCCGCAACTACACCGACACAAGAAGTAA

Protein

MFIYSQLSWDDIQLLVKTAQENKDPVASCIKHLKLNTNHITLLLSDPYLHDEKPEPMMIDIDLSLTAFANARRYYDQKRNAAKKQQKTIESSGKALKSAEKKTKQTLKEAHTISNIIKARKTYWFEKFYWFISSDNYVVIAGRDQQQNELLVKRYMRAGDVYVHADLSGASSVIIKNPRGGTVPPRTLSEAGQAAVAYSVAWEAKVLTRSWWVQASQVSKTAPSGEFLTTGSFMIRGKKNYLLPEHLQFGFSFMFRVEDGCIERHRGERQPLGADEEPPAAPGDDAEDQEIAVSDDDEPSDKEDTKAAEGKLETIAEEPRAADPPDVRASETAIQNERDGDTESDSGDDLPDTHIKVDHGTGQVMLSRTTSEISETPEDKVPSFPALPKKGGKKPQKKEVKVKEEEKKEDKKDGPKRGQRGKLKKIKEKYKDQDEDERLYKMGLLQAASKMKESKKAQKKAEKPGKSKSQQRANKIPLPAPLILEAESEEELEPDPEGEQQPGPDADSEMLQQLTGSPFADDELLFAVPVVAPYSALNHYKYKVKLTPGTSKRGKAAKTAIQVFLKEPTGTPRERDLLKAVRDEDVARNFPGKVKLSAPQLHRHKK

Uniprot

H9IU23   A0A3S2TEX0   A0A194RHF6   A0A212F6C8   A0A2A4JG44   A0A1S4FHD0   + More
A0A0P6IZE8   A0A182VZW9   A0A182K4I6   A0A182P3X4   A0A088A613   A0A0N0U6K4   W8C4S2   A0A194PHA9   A0A1J1J1E8   A0A0A1XF25   A0A0K8VNK8   B4KBH4   A0A3B0JS42   B4GE19   A0A034VD38   A0A0K2TU66   A0A182FQ50   A0A084WR97   A0A2M4BBK2   A0A2M4BBL0   A0A2M4BBJ6   A0A182HD61   A0A182NR80   W5JPE4   A0A182M4G4   Q171H5   A0A2M4A9X6   A0A182T9E5   A0A2M4AA20   A0A182GU85   A0A0L7QMD1   A0A182RTH0   A0A182JMM1   A0A154P402   A0A2A3EBX4   B0X1V4   A0A182QAN7   A0A182Y433   A0A1Q3F8M9   A0A182UA60   N6TJU6   A0A182UNT2   A0A182HSA6   A0A182XAG7   U4UEP2   Q7PQX6   A0A1I8PEW9   G3ILC4   A0A131XW72   A0A147BH87  

Pubmed

19121390    26354079    22118469    17510324    26999592    24495485    + More
25830018    17994087    18057021    25348373    24438588    26483478    20920257    23761445    25244985    23537049    12364791    14747013    17210077    21804562    29652888   

EMBL

BABH01034254    RSAL01000216    RVE44123.1    KQ460205    KPJ17007.1    AGBW02010046    + More
OWR49295.1    NWSH01001601    PCG70746.1    GDUN01000729    JAN95190.1    KQ435736    KOX77108.1    GAMC01005314    JAC01242.1    KQ459604    KPI92094.1    CVRI01000066    CRL06269.1    GBXI01015217    GBXI01004742    JAC99074.1    JAD09550.1    GDHF01011845    JAI40469.1    CH933806    EDW13641.2    KRG00531.1    OUUW01000007    SPP83232.1    CH479182    EDW33854.1    GAKP01019474    JAC39478.1    HACA01011861    CDW29222.1    ATLV01026002    KE525404    KFB52741.1    GGFJ01001284    MBW50425.1    GGFJ01001285    MBW50426.1    GGFJ01001283    MBW50424.1    JXUM01034057    KQ561010    KXJ80050.1    ADMH02000547    ETN65986.1    AXCM01000275    CH477455    EAT40641.1    GGFK01004285    MBW37606.1    GGFK01004315    MBW37636.1    JXUM01018613    KQ560517    KXJ82026.1    KQ414894    KOC59782.1    KQ434809    KZC06563.1    KZ288305    PBC28792.1    DS232271    EDS38832.1    AXCN02001469    GFDL01011172    JAV23873.1    APGK01035020    KB740923    ENN78148.1    APCN01000256    KB632326    ERL92434.1    AAAB01008859    EAA08148.6    JH003983    EGW13412.1    GEFM01004253    JAP71543.1    GEGO01005247    JAR90157.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000007151    UP000218220    UP000075920    + More
UP000075881    UP000075885    UP000005203    UP000053105    UP000053268    UP000183832    UP000009192    UP000268350    UP000008744    UP000069272    UP000030765    UP000069940    UP000249989    UP000075884    UP000000673    UP000075883    UP000008820    UP000075901    UP000053825    UP000075900    UP000075880    UP000076502    UP000242457    UP000002320    UP000075886    UP000076408    UP000075902    UP000019118    UP000075903    UP000075840    UP000076407    UP000030742    UP000007062    UP000095300    UP000001075   

PRIDE

H9IU23    G3ILC4   

Pfam

PF11923   NFACT-C        + More
PF05670   NFACT-R_1

Interpro

IPR021846   NFACT-C        + More
IPR008532   NFACT_RNA-bd       

ProteinModelPortal

H9IU23   A0A3S2TEX0   A0A194RHF6   A0A212F6C8   A0A2A4JG44   A0A1S4FHD0   + More
A0A0P6IZE8   A0A182VZW9   A0A182K4I6   A0A182P3X4   A0A088A613   A0A0N0U6K4   W8C4S2   A0A194PHA9   A0A1J1J1E8   A0A0A1XF25   A0A0K8VNK8   B4KBH4   A0A3B0JS42   B4GE19   A0A034VD38   A0A0K2TU66   A0A182FQ50   A0A084WR97   A0A2M4BBK2   A0A2M4BBL0   A0A2M4BBJ6   A0A182HD61   A0A182NR80   W5JPE4   A0A182M4G4   Q171H5   A0A2M4A9X6   A0A182T9E5   A0A2M4AA20   A0A182GU85   A0A0L7QMD1   A0A182RTH0   A0A182JMM1   A0A154P402   A0A2A3EBX4   B0X1V4   A0A182QAN7   A0A182Y433   A0A1Q3F8M9   A0A182UA60   N6TJU6   A0A182UNT2   A0A182HSA6   A0A182XAG7   U4UEP2   Q7PQX6   A0A1I8PEW9   G3ILC4   A0A131XW72   A0A147BH87  

PDB

3J92     E-value=6.56408e-20,     Score=242

KEGG

101736439    no KO assigned | (RefSeq) nuclear export mediator factor NEMF homolog

GO

GO:0005623   GO:0006611   GO:1902167   GO:0072344   GO:0043023   GO:1990116   GO:0000049   GO:1990112  

Length:

606

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02398

Exp number, first 60 AAs:

5e-05

Total prob of N-in:

0.00057

outside

1  -  606

 

 

Pi

158.921552

Theta

130.225006

Tajima's D

0.568398

CLR

113.663002

CSRT

0.536623168841558

Interpretation

Uncertain