Gene

KWMTBOMO14957

Pre Gene Modal

BGIBMGA000815

Annotation

PREDICTED:_bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]

Location

Bomo_Chr25(+):1094793-1107367      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.941

CDS

ATGCAGAAAGTACCGGAAGGCGATTGGTTCTGCGATCAGTGCAAGCCGAAAGAACATAAACGGTCACCCAGGAAGAAGAGGAAACTGTACTCCGAGGAAGATGTCGAAGAACCACCGAACAGCGAAGCGGAAGCGGAGGAGTGCGAGGATGAAGAGGGCGGCATCGACGCGGGCGTGTGCGCGGCGTGCGGCAGCGGCGGGCGCCTGCGGGCCACGTGCCGCGCCTGCGCCGCCGCCTTCCACGCAGAGTGCGCCGAGCCGCGCCCCCCGCCCGGCGCCGCGCGCTGGCTCTGCGCCGCCTGCCTCGCGCCCACCAGAGGTCTCTGTCCTAACCTTTATGTGTACATACAGGAATTCGAGGCGATGTCGAGCGTCCGGCGCTGTGCTGCCACCGCGTTGTCCAACATCCACCAGTACACGAGGGCGCTGCACGCGAGCCCCTCCTCCGAGTCAGAAGACAGCGATTACAACACGACTCTGGTTAAACTGAAAAAGAGGAAACAGCGCCACAGCAACGACGCGGTGCCCCTGCAGAACGGGACCACCCCTCCTTCGGGGAAGAAACGCGGCAGGAAACCAAAACACGAGAAACTGAACATGAGCAACGGGAAAGATAGGAGATCGAAAAATTCCCTCACAAACGGAGTTCATGAGGAGCGTGCGGCGCGCGGGCCTGACGCCGTGCAGCAGCTGCTGCGTGACGTCATCAAGCACAAGGACAGCTGGCCCTTCTACGAGCCCGTCTCCATTGAGGATGTACCTGATTATCTTGACGTAATCGATCAGCCCATGGACCTCACCACGATCAAAGAGAAGCTGGAGAAGTCCCAATACAGCTCGGACGAGGAGCTGATAGCTGATATAGCGCTAATATTCCATAATTGCTACACTTACAATACTGATACACATCCCGTTGCCAAGGCCGGTGGTCGCCTCGAGAAATTCGTGAACAAGCGCTGCGCCGAACTCGACTTGCCCTCGCTGCCCGAGCTCAGCTTCAGCAAGAGGAAGGAAGCCGAGTCTCAGGAACACTCTGCGGGCCCCTCCTCCGATGACGAGGACGACCTGCCCATAGCCAAGAGAAAGAAGCACAAGTAA

Protein

MQKVPEGDWFCDQCKPKEHKRSPRKKRKLYSEEDVEEPPNSEAEAEECEDEEGGIDAGVCAACGSGGRLRATCRACAAAFHAECAEPRPPPGAARWLCAACLAPTRGLCPNLYVYIQEFEAMSSVRRCAATALSNIHQYTRALHASPSSESEDSDYNTTLVKLKKRKQRHSNDAVPLQNGTTPPSGKKRGRKPKHEKLNMSNGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPIAKRKKHK

Uniprot

H9IU85   A0A2A4JG07   A0A2H1VPS5   A0A194PHB9   A0A212EZJ2   N6TXJ9   + More
A0A0M8ZSR3   U4URP0   A0A087ZZS1   E2BPI3   A0A0T6AYV7   A0A0L7R1H5   A0A2A3ESA3   A0A195FN21   E2ARX0   A0A154P2L3   A0A0J7L3T8   K1PMD9   A0A195CAK0   A0A151X6G2   A0A1Y1JYR0  

Pubmed

19121390    26354079    22118469    23537049    20798317    22992520    + More
28004739   

EMBL

BABH01034237    BABH01034238    NWSH01001542    PCG70911.1    ODYU01003717    SOQ42843.1    + More
KQ459604    KPI92104.1    AGBW02011278    OWR46902.1    APGK01051081    KB741181    ENN73086.1    KQ435863    KOX70380.1    KB632333    ERL92740.1    GL449633    EFN82387.1    LJIG01022582    KRT79799.1    KQ414667    KOC64720.1    KZ288194    PBC33921.1    KQ981424    KYN41791.1    GL442192    EFN63819.1    KQ434809    KZC06179.1    LBMM01000985    KMQ97109.1    JH817970    EKC25157.1    KQ978081    KYM97133.1    KQ982482    KYQ55971.1    GEZM01100267    JAV52930.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000019118    UP000053105    + More
UP000030742    UP000005203    UP000008237    UP000053825    UP000242457    UP000078541    UP000000311    UP000076502    UP000036403    UP000005408    UP000078542    UP000075809   

PRIDE

H9IU85   

Pfam

PF00439   Bromodomain        + More
PF10537   WAC_Acf1_DNA_bd
PF00628   PHD
PF15612   WHIM1
PF02791   DDT
PF15613   WSD

Interpro

IPR036427   Bromodomain-like_sf        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR001487   Bromodomain       
IPR011011   Znf_FYVE_PHD       
IPR018359   Bromodomain_CS       
IPR028942   WHIM1_dom       
IPR019787   Znf_PHD-finger       
IPR001965   Znf_PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR028941   WHIM2_dom       
IPR018501   DDT_dom       
IPR013136   WSTF_Acf1_Cbp146       
IPR037325   Acf1_Bromo       

SUPFAM

SSF47370   SSF47370        + More
SSF57903   SSF57903       

Gene 3D

1.20.920.10     3.30.40.10    

CDD

cd05504  Bromo_Acf1_like

ProteinModelPortal

H9IU85   A0A2A4JG07   A0A2H1VPS5   A0A194PHB9   A0A212EZJ2   N6TXJ9   + More
A0A0M8ZSR3   U4URP0   A0A087ZZS1   E2BPI3   A0A0T6AYV7   A0A0L7R1H5   A0A2A3ESA3   A0A195FN21   E2ARX0   A0A154P2L3   A0A0J7L3T8   K1PMD9   A0A195CAK0   A0A151X6G2   A0A1Y1JYR0  

PDB

1E6I     E-value=1.07999e-19,     Score=237

KEGG

101739636    K11655 bromodomain adjacent to zinc finger domain protein 1A | (RefSeq) bromodomain adjacent to zinc

GO

GO:0046872   GO:0005634   GO:0006338   GO:0005515   GO:0003899   GO:0006351   GO:0006886   GO:0016192   GO:0030117   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

Subcellular location

Nucleus  

Length:

365

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00366

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01749

outside

1  -  365

 

 

Pi

163.851236

Theta

171.169004

Tajima's D

-1.412352

CLR

148.657744

CSRT

0.0753962301884906

Interpretation

Uncertain