Gene

KWMTBOMO14956

Pre Gene Modal

BGIBMGA000814

Annotation

PREDICTED:_bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]

Location

Bomo_Chr25(+):1086783-1094454      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.288

CDS

ATGGACACGAACTCGCGCGCCTACTGTACATTTTCACTTCATTTGCTGCACCTGCTGTCGTCGGGCGCGGCGGGCACGGCGCGGGGCGCGGCGTGGCGCGCGTCGCAGCGCGGCGGCTACTCCTCGCTCGACGACCCCGGCCTGCGACTGCGCCGGCGCGCGCCACAGCTGCTCGTGCGGCTCGCCAAGTACCACGTGGCTGAGCTCGGACTAGATGACAAATTCGAAATACTCCAGTGCTTGATGAACCAGATACTGACTTACGCGACCGTCCGTGATGTCATTGAGGAAAAACTCGAGGAACACAAGAATTCTAAGCAAGCTTTGAGACTTTTACAGATAAACGAAAGGAAACGCGAAGCGCAACTGCTCGCGTCGAAACAAGATCTTAAGAAAGAAGCTGCAGCTAAAAAAGAGGAGAACAAGCTCTCTGGTGAAAAAGCTCGAGCTATAGACGAACAGCTTAAAGTCGACACAGAGAAGCTGAACAAAGAAAACGACGAGAAAAAGAAAGAGTACGAAAAGAAATTAAAAGAACTGCAAATCGGATTGTTCGACTATTCTTCTTATCTTGGCATGGATCGCGCTTACCGTCGCTACTGGCTCAACCAGGCCGTGGCCGGGCTGTTCGTGGAGGCGGGCACGGAGCCGCGCGGGCCGTGCCGCGACAAGCCGCTGCCTTCCGCTCCTGAGCACGGAGAGGACACCCTCACCTATGTCACTAGATTGTTTGAAACCGAAAAGGAAAGAGCGAGTAGTGATAAAGAAAATGATTCGGCAGCAAATTCACGGGGGAATTCCCCAAAGAAACCGCTCACGAACATCAATGGCTTAACACACAGGAACGGGTTCGATGATATCACACAACAGCTATTGATCTGCAGCGGAGATCTTTCTACGTGCAAAGTGCATGGAAAGGTCGACCGGCCCCAATGGTGGGTCTACCACACAGAGGAACAGATAGAAGCATTGATCCAGTCTCTAAACAAGCGCGGTATTAGGGAAAGTGAACTCCGACAGAGCCTGGAGCTGGACAAGGACAACATCATTCAGTACCTGAGGAAATGTCCTGTCAAGTACCTCAATGGATCTGCTGCTAGTTCTCCCCCTCCCCCCGCGCCGCACTACACGCGCCGCCGCCCCCCGCCCCCCTCGCTCACCGTGCCGCGCGACTCCTCGCTGGCCGAGGCCGTGGAGCTGGTACTGCGCGACTATATCCTCGATCTGGAGGAGAAGATTCACTACGGATGCCTTGGAGCCCTTAAAGTTAAGGACCGCGAGGCGTGGCGCGGGACGATAATGCTGCGCGGGTACGACAAACAAGCCGACTACCTGACCTGGGGCCCCAACCAAATGTACAGAGATGACTATCACCAGCCCAACGGCGTTCTGAATATTCCTCAAGATCTTGACGAAACAGAGCTAGAGTCGATACCGGTGAACAAATACCGCGACCCCGGCTACTACCTGGAGGCCGCCAGGGTGAACGGAGTCAAGGTAGAGGGCGACGAGCTGAAGGCGAGGCGTGACGTCATCCGAGGGCTCGCCTGCGCCCTGCTGCAGGTCTCCCAGGCCATACACGCCAAATACTTGAAACGGCCTCTGGGGTGGGACGAGAAGGGGCGGGCGCGCAGCACGGAGGGTGGCGCGCTGGCCCGCTGGCAGGTGTCGCTGCTGGAGTGCGGCAGCGCGGCGGGCGCGCGGCTGCACGCGGCGGCGCTGCACGCGTCCGTGTGCTGGCGCGCGTCCGTGCTGCGCGCCGCCTGCCGCCTGTGCCGCCGCCGCGCCGACCCGCACGCCATGCTGCTGTGCGACGCCTGCAACGCCGGCCACCACCTCTACTGCCTCACGCCGCCGCTGCAGGTACAAGCAGTTGAGAAGTGGCAAGGGACACCCGGATGGAACGAAACTCCTTTCGATTAA

Protein

MDTNSRAYCTFSLHLLHLLSSGAAGTARGAAWRASQRGGYSSLDDPGLRLRRRAPQLLVRLAKYHVAELGLDDKFEILQCLMNQILTYATVRDVIEEKLEEHKNSKQALRLLQINERKREAQLLASKQDLKKEAAAKKEENKLSGEKARAIDEQLKVDTEKLNKENDEKKKEYEKKLKELQIGLFDYSSYLGMDRAYRRYWLNQAVAGLFVEAGTEPRGPCRDKPLPSAPEHGEDTLTYVTRLFETEKERASSDKENDSAANSRGNSPKKPLTNINGLTHRNGFDDITQQLLICSGDLSTCKVHGKVDRPQWWVYHTEEQIEALIQSLNKRGIRESELRQSLELDKDNIIQYLRKCPVKYLNGSAASSPPPPAPHYTRRRPPPPSLTVPRDSSLAEAVELVLRDYILDLEEKIHYGCLGALKVKDREAWRGTIMLRGYDKQADYLTWGPNQMYRDDYHQPNGVLNIPQDLDETELESIPVNKYRDPGYYLEAARVNGVKVEGDELKARRDVIRGLACALLQVSQAIHAKYLKRPLGWDEKGRARSTEGGALARWQVSLLECGSAAGARLHAAALHASVCWRASVLRAACRLCRRRADPHAMLLCDACNAGHHLYCLTPPLQVQAVEKWQGTPGWNETPFD

Uniprot

H9IU84   A0A2A4JG07   A0A2H1VPS5   A0A212EZJ2   A0A194PHB9   A0A194RI66   + More
A0A2J7R258   A0A2J7R251   A0A2J7R268   A0A067RGZ2   A0A1B6CL88   A0A1B6DWQ6   A0A069DXN6   A0A224XHU0   E0VKS8   A0A0P4VQV2   T1I0S2   A0A2P8ZP13   K7J1D5   A0A3L8E372   A0A026WG41   A0A1B6LZL6   E2BPI3   A0A1B6LYN0   A0A0J7L3T8   E2ARX0   D6WU14   A0A336MYR7   A0A336MMI0   U4URP0   Q16HF9   A0A0P6J6G8   A0A1S4G0N1   B3P4Z8   Q5BI37   Q9Y0W1   B4IJ38   A0A1W4VLZ3   Q9NG24   Q9V9T4   B4PP30   W4VS83   Q297V6   B4G333   A0A1I8MT49   B4LY73   B4N950   B0WSI2   A0A1Q3F0X5   B4K850   A0A0P5IMK9   A0A0P5KCC3   A0A1A9Y946   A0A1Q3F0Y3   A0A0P5J2K9   A0A1A9VYB7   A0A0P5EB74   A0A034VHK0   A0A0P5PFQ5   A0A0P5DVJ1   A0A0A1X5E9   A0A0P5QW73   A0A0P5IVG1   A0A0P4Z3I1   A0A1I8NLV6   A0A0P5Y798   A0A0P5RFM6   A0A0P5CAI9   A0A0P5YGS9   A0A0P5R5A9   A0A0N8CUS1   A0A0P5DBW9   A0A164PZN5   A0A1B6J014   A0A0P5ZUI0   A0A0N8DQW0   A0A0P5B560   A0A0P6EH49   A0A0P6DBZ2   A0A1B0B6S9   A0A0P5RHE4   A0A0P5TH33   A0A0P5HWE2   A0A3B0JHS7   A0A232ER24   A0A0P5Q6M3   A0A0P5YH39   A0A1B0AGK0   A0A0P6DM83   A0A0P6II66   A0A0P5RW57   A0A0C9PTD8   A0A0C9QM88   A0A0C9QVD7  

Pubmed

19121390    22118469    26354079    24845553    26334808    20566863    + More
27129103    29403074    20075255    30249741    24508170    20798317    18362917    19820115    23537049    17510324    26999592    17994087    10385622    11447119    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    15632085    25315136    25348373    25830018    28648823   

EMBL

BABH01034235    BABH01034236    BABH01034237    NWSH01001542    PCG70911.1    ODYU01003717    + More
SOQ42843.1    AGBW02011278    OWR46902.1    KQ459604    KPI92104.1    KQ460205    KPJ17020.1    NEVH01008200    PNF34920.1    PNF34918.1    PNF34919.1    KK852643    KDR19569.1    GEDC01023150    JAS14148.1    GEDC01007198    JAS30100.1    GBGD01000091    JAC88798.1    GFTR01008817    JAW07609.1    DS235250    EEB13984.1    GDKW01001189    JAI55406.1    ACPB03015533    PYGN01000005    PSN58246.1    QOIP01000001    RLU27190.1    KK107260    EZA54009.1    GEBQ01010848    JAT29129.1    GL449633    EFN82387.1    GEBQ01011263    JAT28714.1    LBMM01000985    KMQ97109.1    GL442192    EFN63819.1    KQ971352    EFA07691.2    UFQT01002451    SSX33497.1    UFQS01001380    UFQT01001380    SSX10606.1    SSX30289.1    KB632333    ERL92740.1    CH478175    EAT33689.1    GDUN01000079    JAN95840.1    CH954182    EDV52912.1    BT021387    AAX33535.1    AF148962    AAD38952.1    CH480846    EDW50991.1    AJ238397    CAB88669.1    AE014297    AAF57200.1    CM000160    EDW99266.1    GANO01000167    JAB59704.1    CM000070    EAL28099.2    CH479179    EDW24228.1    CH940650    EDW67961.1    CH964232    EDW81597.1    DS232072    EDS33912.1    GFDL01013838    JAV21207.1    CH933806    EDW15404.1    GDIQ01212086    JAK39639.1    GDIQ01212085    JAK39640.1    GFDL01013828    JAV21217.1    GDIQ01212084    JAK39641.1    GDIP01143916    JAJ79486.1    GAKP01017732    GAKP01017727    GAKP01017723    JAC41220.1    GDIQ01135216    JAL16510.1    GDIP01150170    JAJ73232.1    GBXI01008404    JAD05888.1    GDIQ01108919    JAL42807.1    GDIQ01215933    JAK35792.1    GDIP01230670    JAI92731.1    GDIP01061930    JAM41785.1    GDIQ01106617    JAL45109.1    GDIP01189509    JAJ33893.1    GDIP01057933    JAM45782.1    GDIQ01112462    JAL39264.1    GDIP01096879    JAM06836.1    GDIP01162317    JAJ61085.1    LRGB01002490    KZS07297.1    GECU01015207    JAS92499.1    GDIP01038385    JAM65330.1    GDIP01009767    JAM93948.1    GDIP01189510    JAJ33892.1    GDIQ01075531    JAN19206.1    GDIQ01079974    JAN14763.1    JXJN01009222    GDIQ01100685    JAL51041.1    GDIP01126321    JAL77393.1    GDIQ01222033    JAK29692.1    OUUW01000005    SPP80263.1    NNAY01002666    OXU20820.1    GDIQ01125125    JAL26601.1    GDIP01057934    JAM45781.1    GDIQ01075530    JAN19207.1    GDIQ01004021    JAN90716.1    GDIQ01100684    JAL51042.1    GBYB01004638    JAG74405.1    GBYB01004639    JAG74406.1    GBYB01004637    JAG74404.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000235965    + More
UP000027135    UP000009046    UP000015103    UP000245037    UP000002358    UP000279307    UP000053097    UP000008237    UP000036403    UP000000311    UP000007266    UP000030742    UP000008820    UP000008711    UP000001292    UP000192221    UP000000803    UP000002282    UP000001819    UP000008744    UP000095301    UP000008792    UP000007798    UP000002320    UP000009192    UP000092443    UP000078200    UP000095300    UP000076858    UP000092460    UP000268350    UP000215335    UP000092445   

PRIDE

H9IU84    Q5BI37    Q9Y0W1    Q9NG24    Q9V9T4   

Pfam

PF02791   DDT        + More
PF10537   WAC_Acf1_DNA_bd
PF00628   PHD
PF15613   WSD
PF15612   WHIM1
PF00439   Bromodomain

Interpro

IPR019787   Znf_PHD-finger        + More
IPR011011   Znf_FYVE_PHD       
IPR013136   WSTF_Acf1_Cbp146       
IPR018501   DDT_dom       
IPR028941   WHIM2_dom       
IPR028942   WHIM1_dom       
IPR001487   Bromodomain       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR036427   Bromodomain-like_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR018359   Bromodomain_CS       
IPR037325   Acf1_Bromo       
IPR001841   Znf_RING       

SUPFAM

SSF57903   SSF57903        + More
SSF47370   SSF47370       

Gene 3D

1.20.920.10     3.30.40.10    

CDD

cd05504  Bromo_Acf1_like

ProteinModelPortal

H9IU84   A0A2A4JG07   A0A2H1VPS5   A0A212EZJ2   A0A194PHB9   A0A194RI66   + More
A0A2J7R258   A0A2J7R251   A0A2J7R268   A0A067RGZ2   A0A1B6CL88   A0A1B6DWQ6   A0A069DXN6   A0A224XHU0   E0VKS8   A0A0P4VQV2   T1I0S2   A0A2P8ZP13   K7J1D5   A0A3L8E372   A0A026WG41   A0A1B6LZL6   E2BPI3   A0A1B6LYN0   A0A0J7L3T8   E2ARX0   D6WU14   A0A336MYR7   A0A336MMI0   U4URP0   Q16HF9   A0A0P6J6G8   A0A1S4G0N1   B3P4Z8   Q5BI37   Q9Y0W1   B4IJ38   A0A1W4VLZ3   Q9NG24   Q9V9T4   B4PP30   W4VS83   Q297V6   B4G333   A0A1I8MT49   B4LY73   B4N950   B0WSI2   A0A1Q3F0X5   B4K850   A0A0P5IMK9   A0A0P5KCC3   A0A1A9Y946   A0A1Q3F0Y3   A0A0P5J2K9   A0A1A9VYB7   A0A0P5EB74   A0A034VHK0   A0A0P5PFQ5   A0A0P5DVJ1   A0A0A1X5E9   A0A0P5QW73   A0A0P5IVG1   A0A0P4Z3I1   A0A1I8NLV6   A0A0P5Y798   A0A0P5RFM6   A0A0P5CAI9   A0A0P5YGS9   A0A0P5R5A9   A0A0N8CUS1   A0A0P5DBW9   A0A164PZN5   A0A1B6J014   A0A0P5ZUI0   A0A0N8DQW0   A0A0P5B560   A0A0P6EH49   A0A0P6DBZ2   A0A1B0B6S9   A0A0P5RHE4   A0A0P5TH33   A0A0P5HWE2   A0A3B0JHS7   A0A232ER24   A0A0P5Q6M3   A0A0P5YH39   A0A1B0AGK0   A0A0P6DM83   A0A0P6II66   A0A0P5RW57   A0A0C9PTD8   A0A0C9QM88   A0A0C9QVD7  

PDB

4TVR     E-value=0.000492054,     Score=105

KEGG

101739636    K11655 bromodomain adjacent to zinc finger domain protein 1A | (RefSeq) bromodomain adjacent to zinc

GO

GO:0005634   GO:0046872   GO:0016021   GO:0006338   GO:0046020   GO:0006348   GO:0000781   GO:0007399   GO:0043462   GO:0006334   GO:0016590   GO:0031445   GO:0042766   GO:0016584   GO:0003677   GO:0045892   GO:0008623   GO:0070615   GO:0006355   GO:0016573   GO:0031497   GO:0006333   GO:0016746   GO:0005515   GO:0003899   GO:0006351   GO:0006886   GO:0016192   GO:0030117   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

Subcellular location

Nucleus  

Length:

640

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.72867999999998

Exp number, first 60 AAs:

4.69742

Total prob of N-in:

0.23140

outside

1  -  640

 

 

Pi

171.757705

Theta

133.247582

Tajima's D

0.888118

CLR

0.453951

CSRT

0.626618669066547

Interpretation

Uncertain