Gene

KWMTBOMO14950

Annotation

hypothetical_protein_RR48_13881_[Papilio_machaon]

Location

Bomo_Chr25(-):996146-1008532      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.486

CDS

ATGTCCGCGGAGGGCGGCGGCTACTCGCCGTGTCCGGCGGAGGCGCTGCCGGAACTGAGCGCTGCGGAGCTGGCGATGAGCCTGTCGCCGAAGTCGGCCTTGCTGCAGCAGAACCTCTCCCAGCTGCAGCTCCAGCACTCGACTCCGTTCTCCGTGACCGATATCCTGTCGCCGATAGAGGAGTACCGCAAGCTGGAGCTGGCGAACAACCCGCCTTCGCCGTACAGGTCGAATTCTTCAGGCAGCAGTATTAATTCTCCCCTCGGTCCCGCCGCATCCTGCGGGATGACGGCGAACCCTTACGCGGTGCCCCTGTATGGGGGCGCCCCGGTCCAGGGCTATGGGTGTGCACCCACGGACCTGCCCCACTACGGAGACATGCGAGGGGCTGGCTGGTATCCAGCTTCCAACGACCCCAGGTTTGCCAAGTCCATAGACAAGAACGGAATGAATGCCAGCTTCGGGCATGAGATCTAA

Protein

MSAEGGGYSPCPAEALPELSAAELAMSLSPKSALLQQNLSQLQLQHSTPFSVTDILSPIEEYRKLELANNPPSPYRSNSSGSSINSPLGPAASCGMTANPYAVPLYGGAPVQGYGCAPTDLPHYGDMRGAGWYPASNDPRFAKSIDKNGMNASFGHEI

Uniprot

A0A3S2LIG6   H9IU31   A0A2H1WE59   A0A2A4K7T4   A0A194RI71   A0A182FAU0   + More
A0A182I807   A0A182JVM3   A0A182Y762   A0A1J1IRY9   A0A182W0F6   A0A182L7M1   A0A182U9G7   A0A084WNQ1   A0A182MDX8   A0A182N5J7   A0A182PNL7   A0A182VPE3   A0A1Y9HAJ6   F5HL22   A0A1Y9J0L1   A0A182RIE0   A0A182JC06   F5HL23   B0X648   Q17EJ7   A0A182GP94   B4NA09   A0A1S4F5P8   A0A1A9W3K7   A0A2J7PKS8   A0A1B0FAA0   G3NV99   A0A3P8XA39   D6WPZ8   A0A3Q3AME1   A0A2I4BEV5   Q58A07   A0A1S3SNF2   A0A3Q2X202   I3JN06   A0A3P9I467   A0A3B3HHS9   A0A3B3DKS5   A0A315UYA3   A0A3B5R5E6   A0A3Q3JBC0   B3DG22   A0A3Q1FUG5   A0A3N0Y962   A0A147ABG3   A0A2U9CL10   A0A3Q3FAV0   A9IVM0   Q32NN6   A0A3B3UQA2   A0A096LW34   A0A3B3X596  

Pubmed

19121390    26354079    25244985    20966253    24438588    12364791    + More
14747013    17210077    17510324    26483478    17994087    25069045    18362917    19820115    24755649    25186727    17554307    29451363    29703783    23542700    23594743    27762356   

EMBL

RSAL01000004    RVE54552.1    BABH01034227    ODYU01007941    SOQ51152.1    NWSH01000070    + More
PCG79974.1    KQ460205    KPJ17025.1    APCN01002603    CVRI01000059    CRL03005.1    ATLV01024651    KE525354    KFB51845.1    AXCM01016642    AXCN02001164    AAAB01008880    EGK96984.1    EGK96983.1    DS232402    EDS41198.1    CH477282    EAT44882.1    JXUM01078103    KQ563044    KXJ74584.1    CH964232    EDW81764.2    NEVH01024531    PNF16935.1    CCAG010015604    KQ971354    EFA07447.2    AB159045    FR904470    BAD93687.1    CDQ64425.1    AERX01015086    NHOQ01002481    PWA16367.1    BX322615    BC162246    BC162251    AAI62246.1    RJVU01049301    ROL42789.1    GCES01010460    JAR75863.1    CP026259    AWP16730.1    AM930413    CAP59468.1    BC108549    CM004475    AAI08550.1    OCT77748.1    AYCK01001274    AYCK01001275   

Proteomes

UP000283053    UP000005204    UP000218220    UP000053240    UP000069272    UP000075840    + More
UP000075881    UP000076408    UP000183832    UP000075920    UP000075882    UP000075902    UP000030765    UP000075883    UP000075884    UP000075885    UP000075903    UP000075886    UP000007062    UP000076407    UP000075900    UP000075880    UP000002320    UP000008820    UP000069940    UP000249989    UP000007798    UP000091820    UP000235965    UP000092444    UP000007635    UP000265140    UP000007266    UP000264800    UP000192220    UP000193380    UP000087266    UP000264840    UP000005207    UP000265200    UP000001038    UP000261560    UP000002852    UP000261600    UP000000437    UP000257200    UP000246464    UP000261660    UP000186698    UP000261500    UP000028760    UP000261480   

PRIDE

H9IU31   

Pfam

PF00046   Homeodomain

Interpro

IPR009057   Homeobox-like_sf        + More
IPR001356   Homeobox_dom       
IPR017970   Homeobox_CS       
IPR020479   Homeobox_metazoa       

SUPFAM

SSF46689   SSF46689       

CDD

cd00086  homeodomain

ProteinModelPortal

A0A3S2LIG6   H9IU31   A0A2H1WE59   A0A2A4K7T4   A0A194RI71   A0A182FAU0   + More
A0A182I807   A0A182JVM3   A0A182Y762   A0A1J1IRY9   A0A182W0F6   A0A182L7M1   A0A182U9G7   A0A084WNQ1   A0A182MDX8   A0A182N5J7   A0A182PNL7   A0A182VPE3   A0A1Y9HAJ6   F5HL22   A0A1Y9J0L1   A0A182RIE0   A0A182JC06   F5HL23   B0X648   Q17EJ7   A0A182GP94   B4NA09   A0A1S4F5P8   A0A1A9W3K7   A0A2J7PKS8   A0A1B0FAA0   G3NV99   A0A3P8XA39   D6WPZ8   A0A3Q3AME1   A0A2I4BEV5   Q58A07   A0A1S3SNF2   A0A3Q2X202   I3JN06   A0A3P9I467   A0A3B3HHS9   A0A3B3DKS5   A0A315UYA3   A0A3B5R5E6   A0A3Q3JBC0   B3DG22   A0A3Q1FUG5   A0A3N0Y962   A0A147ABG3   A0A2U9CL10   A0A3Q3FAV0   A9IVM0   Q32NN6   A0A3B3UQA2   A0A096LW34   A0A3B3X596  

KEGG

101739075    K09342 homeobox protein Nkx-2.1 | (RefSeq) thyroid transcription factor 1-like

GO

GO:0003677   GO:0005634   GO:0043565   GO:0006355   GO:0000978   GO:0030154   GO:0045944   GO:0003700   GO:0021854   GO:0001046  

Subcellular location

Nucleus  

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00772

Exp number, first 60 AAs:

0.00029

Total prob of N-in:

0.03654

outside

1  -  158

 

 

Pi

162.197407

Theta

151.12079

Tajima's D

0.243896

CLR

0.249772

CSRT

0.43832808359582

Interpretation

Uncertain