Gene
KWMTBOMO14947 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000809
Annotation
PREDICTED:_5'-3'_exoribonuclease_2_homolog_[Bombyx_mori]
Full name
5'-3' exoribonuclease
Location in the cell
Nuclear Reliability : 2.739
Sequence
CDS
ATGGCGGAGCTCTTCACCCGGTCCCCTTTTGTGCAGTTCCGTCCGCTGGAGCAGCTGATGGGGGTGTTCCCGGCCGCCAGCGCGCAGCACGTGCCGCGACCCTGGGCGCGCCTCATGAGTGACCCGTTCTCTCCCATCATCGACTTCTATCCGACGGACTTCAAGATCGACCTGAACGGCAAGAAGTTCGCGTGGCAGGGCGTCGCCCTCCTGCCCTTCGTCGACGAAAACAGACTCTTCAAAGCCCTGGAGCCCTACTATAAGGAGCTGACGCAAGCTGAAATACAACGGAACATACGAGGCCACGACCGACTCTACGTGTCGACCGGGAATCAAAGCTACGAATACATCCTGGGGCTGTACGAGGAAGCTCAGCAGGACCTCCGAAAGCTCATCGAGGACAAACAGAAGTACCCCTACCAGTCGGAGGGGGTGAGGGGGAACGTGATGCTGAGCGCTGACAACGTGCTCATTGGGGGACAGCTGCCGTCCCCGGTGGTGGGTCTGGCGCCGGTGCTGGGTAACCGCGTGGTGGTGGTGCGGTTCGAGGACCCGCAGTACCCGGACGAGTTCGTGTTCCCGGCGCGGCGGCTGCAGCGCGCCACGGCGCCGCCCCGGGTGCTCAAGCCCGGAGCCCTCGACCAGAGGGAGCACCGGAACTGGAGACCGCAGATAGGCATGGTGCGCTCCAACACCGTGGCCAGTCTGGAGTCGGCCGGGCGCAGGATGCTGGGACATCATCTGCCGAGGGAGAGGGCGTACGCCTCGGTGCCGCCCCCGCACAATCCGCAGCGAGAACGCTCGCAGTCATTCGGACCGGCACGAGGCGGCTATGTACCACACAATCCTAACCAGTCATACCAGAACTACAATCGGTCCGGTAATTCAAGTCAATCGTACGGAAGCCAGAACCACTCCTACGGGAATCAGAACCAGTCTTACGGAAACCAGAACCATCCGAAGCAAGGCTACCATCAAAACAGAGGTCAAAATCAGGGCTACAACAGCTCCAACCAGGACTACGGTAACCAATATAGCAACAACCCTGGCTACAGTACAGATTATAACAATCAGGGCCAAGGCTACAACAGCTACAAAGGAGGTAATAATTATAGCAGCCATCAGCAGAATAAGCAGGGGCAGGGAAGATGGCAGCAGAGAGGCGGTGGAGGGGCAGGAGGGAGTTGGCGGTAA
Protein
MAELFTRSPFVQFRPLEQLMGVFPAASAQHVPRPWARLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKELTQAEIQRNIRGHDRLYVSTGNQSYEYILGLYEEAQQDLRKLIEDKQKYPYQSEGVRGNVMLSADNVLIGGQLPSPVVGLAPVLGNRVVVVRFEDPQYPDEFVFPARRLQRATAPPRVLKPGALDQREHRNWRPQIGMVRSNTVASLESAGRRMLGHHLPRERAYASVPPPHNPQRERSQSFGPARGGYVPHNPNQSYQNYNRSGNSSQSYGSQNHSYGNQNQSYGNQNHPKQGYHQNRGQNQGYNSSNQDYGNQYSNNPGYSTDYNNQGQGYNSYKGGNNYSSHQQNKQGQGRWQQRGGGGAGGSWR
Summary
Description
Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
Similarity
Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily.
Uniprot
EC Number
3.1.13.-
EMBL
Proteomes
Interpro
ProteinModelPortal
PDB
5FIR
E-value=1.91558e-33,
Score=356
Ontologies
KEGG
PATHWAY
PANTHER
Topology
Length:
397
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00915
Exp number, first 60 AAs:
0.00063
Total prob of N-in:
0.00216
outside
1 - 397
Population Genetic Test Statistics
Pi
191.509862
Theta
149.114281
Tajima's D
0.898832
CLR
0.077029
CSRT
0.632468376581171
Interpretation
Uncertain
