Gene

KWMTBOMO14939  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000804

Annotation

mitochondrial_ATP_synthase_coupling_factor_6_[Bombyx_mori]

Location

Bomo_Chr25(+):787033-788442      View in EpiBrowser

Full name

ATP synthase-coupling factor 6, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 1.701

CDS

ATGCTCGTATCAAAACTGGTTGGTTTGAGGGCGGCGACCACTTCCATGATGGTCAGTAGAAATTTAGCGGCAGCTCAGAAAGCTACCGATCCCATCCAACAGCTGTTTTTAGATAAAATCAGGGAATACAAACAGAAGAGCGCGGGTGGCAAAGTCCCAGATGCCAGCCCTGCTGTCGAGAAAGAGCTGAAAACTGAATTAGAAAAGCTTGAGAAGCAGTATGGAGGGGGTCCCGGAATCGACATGACAGCATTCCCATCTCTGAAATTTGAAGAACCTAAGCTGGACCCCATTGATGAACAGGCCGCCCCCAAGAAGTGA

Protein

MLVSKLVGLRAATTSMMVSRNLAAAQKATDPIQQLFLDKIREYKQKSAGGKVPDASPAVEKELKTELEKLEKQYGGGPGIDMTAFPSLKFEEPKLDPIDEQAAPKK

Description

Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain.

Similarity

Belongs to the eukaryotic ATPase subunit F6 family.
Belongs to the WD repeat SEC13 family.

Uniprot

Q1HPM6   A0A0L7KNK4   A0A194PGG3   A0A194RI86   A0A0K8SQL0   A0A2W1BVJ1   + More
A0A3S2LVB0   A0A212EHB4   A0A2A4JHJ2   A0A2H1W3L0   E3UPD0   A0A2W1BGQ5   A0A2A4JAN6   A0A1J1I514   B8XY08   E2AGN2   Q17H51   A0A1S4F2T8   B6DDV7   A0A182PSQ5   U5EUA2   A0A0J7L2W9   A0A151X7I3   T1E3Q7   A0A195CBQ6   T1DEZ9   A0A2M4AA23   A0A224Y2F2   A0A0T6B055   A0A195DLY5   T1GY90   A0A182XDQ5   A0A1B6C1C8   A0A2M3Z030   A0A182FP58   A0A2M4C473   A0A0P4VHT1   R4FLH7   A0A182LNN7   Q7Q7P4   A0A182IDG4   A0A2P8YYB5   Q5MIP9   T1DFP1   E9IXS2   A0A0V0G3G2   F4X1G8   A0A1B6GI34   A0A069DNC6   A0A182TQ12   A0A182V2I8   A0A1W4XIN9   A0A2J7R4R0   A0A182YET2   D1FQ50   A0A182Q6H2   T1E347   A0A182NDY9   A0A182VPR0   A0A1B6K417   V5GW68   D6WSX9   A0A3L8D6R6   A0A067R407   A0A1B6IK82   A0A0A9XJP8   A0A026WRA3   A0A146KW89   A0A182LXT4   A0A182REB0   A0A182JXH1   A0A182J482   T1J6P0   A0A1B0GQC8   A0A0K8TQT7   A0A1B6KKT7   A0A146M9C8   B4JI06   A0A1B6MGM3   B0WNE9   A0A2H1W5U6   A0A232EX76   K7J3X9   A0A195BJ79   A0A158NA73   B4K4I0   N6UHM1   A0A2R7VZE8   A0A195FRC5   A0A0P4WD74   A0A1L8E016   A0A1L8EF44   R4WIQ2   A0A1L8EF88   B4LVY8   A0A1L8E0A0   A0A336L460   W8BWU4  

Pubmed

26227816    26354079    28756777    22118469    20798317    17510324    + More
19178717    20920257    23761445    24330624    27129103    20966253    12364791    14747013    17210077    29403074    17244540    24945155    26483478    21282665    21719571    26334808    25244985    18362917    19820115    30249741    24845553    25401762    24508170    26823975    26369729    17994087    28648823    20075255    21347285    23537049    23691247    24495485   

EMBL

DQ443376    ABF51465.1    JTDY01007883    KOB64888.1    KQ459604    KPI92118.1    + More
KQ460205    KPJ17040.1    GBRD01010709    JAG55115.1    KZ149945    PZC76810.1    RSAL01000004    RVE54546.1    AGBW02014918    OWR40883.1    NWSH01001499    PCG71054.1    PCG71055.1    ODYU01006087    SOQ47623.1    HM536614    ADO95153.1    KZ150148    PZC72864.1    NWSH01002103    PCG69177.1    CVRI01000039    CRK94684.1    FJ458409    ACL37991.1    GL439339    EFN67415.1    CH477253    EAT45962.1    EU934325    ADMH02001905    ACI30103.1    ETN60559.1    GANO01002412    JAB57459.1    LBMM01000967    KMQ97137.1    KQ982446    KYQ56327.1    GALA01000155    JAA94697.1    KQ978009    KYM98130.1    GAMD01003311    JAA98279.1    GGFK01004271    MBW37592.1    GFTR01001745    JAW14681.1    LJIG01016396    KRT80728.1    KQ980734    KYN13842.1    CAQQ02077811    CAQQ02077812    CAQQ02077813    GEDC01029991    JAS07307.1    GGFM01001126    MBW21877.1    GGFJ01010972    MBW60113.1    GDKW01002385    JAI54210.1    ACPB03001069    GAHY01002104    JAA75406.1    AAAB01008952    EAA10598.2    APCN01005975    PYGN01000288    PSN49237.1    JXUM01060179    AY826161    GAPW01006356    GAPW01006355    GAPW01006354    KQ562091    AAV90733.1    JAC07242.1    KXJ76715.1    GALA01000497    JAA94355.1    GL766762    EFZ14637.1    GECL01003515    JAP02609.1    GL888529    EGI59696.1    GECZ01007667    JAS62102.1    GBGD01003569    JAC85320.1    NEVH01007402    PNF35819.1    EZ419950    ACZ28305.1    AXCN02002212    GALA01000154    JAA94698.1    GECU01001505    JAT06202.1    GALX01002544    JAB65922.1    KQ971352    EFA07467.2    QOIP01000012    RLU15881.1    KK852718    KDR17794.1    GECU01020380    JAS87326.1    GBHO01022657    GBHO01022652    GBHO01011467    JAG20947.1    JAG20952.1    JAG32137.1    KK107131    EZA58201.1    GDHC01018111    JAQ00518.1    AXCM01000127    JH431880    AJVK01016284    GDAI01001333    JAI16270.1    GEBQ01027905    JAT12072.1    GDHC01002281    JAQ16348.1    CH916369    EDV93926.1    GEBQ01004946    JAT35031.1    DS232010    EDS31603.1    ODYU01006502    SOQ48393.1    NNAY01001764    OXU22986.1    AAZX01000988    KQ976455    KYM85156.1    ADTU01010056    ADTU01010057    CH933806    EDW13932.1    APGK01034997    KB740923    ENN78132.1    KK854191    PTY12867.1    KQ981305    KYN42981.1    GDRN01079695    GDRN01079693    JAI62341.1    GFDF01001986    JAV12098.1    GFDG01001452    JAV17347.1    AK417340    BAN20555.1    GFDG01001453    JAV17346.1    CH940650    EDW66493.2    GFDF01001985    JAV12099.1    UFQS01000993    UFQT01000993    SSX08314.1    SSX28337.1    GAMC01000775    JAC05781.1   

Proteomes

UP000037510    UP000053268    UP000053240    UP000283053    UP000007151    UP000218220    + More
UP000183832    UP000000311    UP000008820    UP000000673    UP000075885    UP000036403    UP000075809    UP000078542    UP000078492    UP000015102    UP000076407    UP000069272    UP000015103    UP000075882    UP000007062    UP000075840    UP000245037    UP000069940    UP000249989    UP000007755    UP000075902    UP000075903    UP000192223    UP000235965    UP000076408    UP000075886    UP000075884    UP000075920    UP000007266    UP000279307    UP000027135    UP000053097    UP000075883    UP000075900    UP000075881    UP000075880    UP000092462    UP000001070    UP000002320    UP000215335    UP000002358    UP000078540    UP000005205    UP000009192    UP000019118    UP000078541    UP000008792   

PRIDE

Q1HPM6   

Pfam

PF05511   ATP-synt_F6        + More
PF00400   WD40

Interpro

IPR036204   ATP_synth_f6_sf_mt        + More
IPR008387   ATP_synth_f6_mt       
IPR037363   Sec13/Seh1_fam       
IPR001680   WD40_repeat       
IPR037596   Sec13       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       

SUPFAM

SSF111357   SSF111357        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

Q1HPM6   A0A0L7KNK4   A0A194PGG3   A0A194RI86   A0A0K8SQL0   A0A2W1BVJ1   + More
A0A3S2LVB0   A0A212EHB4   A0A2A4JHJ2   A0A2H1W3L0   E3UPD0   A0A2W1BGQ5   A0A2A4JAN6   A0A1J1I514   B8XY08   E2AGN2   Q17H51   A0A1S4F2T8   B6DDV7   A0A182PSQ5   U5EUA2   A0A0J7L2W9   A0A151X7I3   T1E3Q7   A0A195CBQ6   T1DEZ9   A0A2M4AA23   A0A224Y2F2   A0A0T6B055   A0A195DLY5   T1GY90   A0A182XDQ5   A0A1B6C1C8   A0A2M3Z030   A0A182FP58   A0A2M4C473   A0A0P4VHT1   R4FLH7   A0A182LNN7   Q7Q7P4   A0A182IDG4   A0A2P8YYB5   Q5MIP9   T1DFP1   E9IXS2   A0A0V0G3G2   F4X1G8   A0A1B6GI34   A0A069DNC6   A0A182TQ12   A0A182V2I8   A0A1W4XIN9   A0A2J7R4R0   A0A182YET2   D1FQ50   A0A182Q6H2   T1E347   A0A182NDY9   A0A182VPR0   A0A1B6K417   V5GW68   D6WSX9   A0A3L8D6R6   A0A067R407   A0A1B6IK82   A0A0A9XJP8   A0A026WRA3   A0A146KW89   A0A182LXT4   A0A182REB0   A0A182JXH1   A0A182J482   T1J6P0   A0A1B0GQC8   A0A0K8TQT7   A0A1B6KKT7   A0A146M9C8   B4JI06   A0A1B6MGM3   B0WNE9   A0A2H1W5U6   A0A232EX76   K7J3X9   A0A195BJ79   A0A158NA73   B4K4I0   N6UHM1   A0A2R7VZE8   A0A195FRC5   A0A0P4WD74   A0A1L8E016   A0A1L8EF44   R4WIQ2   A0A1L8EF88   B4LVY8   A0A1L8E0A0   A0A336L460   W8BWU4  

PDB

5FIL     E-value=9.82846e-06,     Score=110

KEGG

778519    K02131 F-type H+-transporting ATPase subunit 6 | (RefSeq) mitochondrial ATP synthase coupling factor

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0015078   GO:0015986   GO:0000276   GO:0005753   GO:1904263   GO:0000139   GO:0015031   GO:0005198   GO:0030127   GO:0090114   GO:0006886   GO:0016192   GO:0030117   GO:0007154   GO:0016020   GO:0005112   GO:0015930  

PANTHER

PTHR12441   PTHR11024:SF2   PTHR11024  

Subcellular location

Mitochondrion  
Mitochondrion inner membrane  

Length:

106

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00752

Exp number, first 60 AAs:

0.00752

Total prob of N-in:

0.10031

outside

1  -  106

 

 

Pi

405.393732

Theta

232.584468

Tajima's D

2.316951

CLR

0.172716

CSRT

0.926303684815759

Interpretation

Uncertain