Silkworm Genome Informatics Database

Gene

KWMTBOMO14923

Pre Gene Modal

BGIBMGA000792

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_zinc_finger_protein_433-like_[Bombyx_mori]

Location

Bomo_Chr25(+):509203-515577 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.075

CDS

ATGATGCAGTGTGTGACTGCAAAGATGGCCACGGGAGTGGTTGTCAATCAGCCAGCAAACTCTAAACCTGCATCTCCCATAGACAGAGATTTAAAACAGTTTGATAACATATGTAGAACGTGTGCTCAGCCTGCAGATTATCTTATACCCATATTTGAGGGAGAAGGTTTAAAAAAAAACTTGCCAGAACTGATAAATAAACATCTTCCAATAATGGTATCACCAGATGATGGCATGCCACATGTACTGTGCTACCACTGTGCAACCACTGTCCTAGCATGGCATGAACTCAAGCACATCTGCGTGCATGCAGATGAAGCTCTGAGGCAGCGTTTCCAAGTTCTTCAGGCTCCCATAGCAGATGAATTCGAAAAACAGCAGCAGTTCATTCAACAAATCAGTGCAGAACAAGAAAAGTCTGATTCAAAAATGGAGTTTTATGAAAATTTTAAAATGGTATTGAATAAATACTTGAGTGAATTGAATATAGCTGTTCACGGGGACATGGAGTTTGTATGTCTGAAATGTGATGAGCAACATTCTAGAATGTCATCGCAGCTATTAGCTGAGCATTGTAATACTGTTCATTGCTTTGATGTAGATAAATTGGAAACATTCATTAAAGAATATGTAATTATTGAAGAATCCCTAGCTTTTAGTTCAGGAGACAGCGACAAGGATGACAGATCAGTGAACCCTGATAAGGAGCCTCTCCCAAATTATAACTGCTCATATTGTGAATGCATTTTCTCTTCTGTATCACGACTCGTTTTTCATTTGAACAGCCACAAAGAAAATCCAAAAAAAGATGGAGTAATGTGCTGCAAAGAATTGTATACAGATAACAAAGAGCTTAGGAAACATTTGCAGAAGGAACACACCAGTACTGCAGAGAGTAACATTTGTAGATCGTGCGGATATAAAACTGACAGTGCAGGTCTCCTACAGAAACATATCTTCGAACAGCACAACAATTGTAAGGCCAGTAAAAATACTAAAGTGGAACAGAGCATAAAAAACCAGAAATATATACCGGCCGTGTGTCCAGAGTGCAACAAAACATTCTCCAACAAATACAACATGTTCGTGCACATGAAGAGCCACAGCGACCCGCACGCGACCCACGGCTGCGACCAGTGCGCCCGCACCTACCGCAGCGCCGCCACCCTGCGCGCGCACCGCCGCCTCGCGCACCGCGGCCTCATGCCGCACCCCTGCCCCCGCTGCGGGGAGCCCTTCCCCACCCGCGCCGCCCGCGACCTCCACGCCTGCCTCCACAGCGGACACAGGCCCTACCACTGTCCACAGTGCGGGAAGTCCTACCGAGCTAAGAACACTCTCGACCGCCATATGGAAATGCATCAAAATATCAGAAAATACGAGTGCCAAATCTGCTCGAAGAAATTGCCTCCCCGCCCTAAGTTCCGCCCCCGCGATACCGAACTTAGCAAAGAACCTTCAGACGCGGACAAGTACTCGGACGACCCGGCGGACGACGAGGACGAGCCCCTCTCGGTGGCCGCCTCGAGGAAGTCTTCCGAACTCTACGAATCGTTTTACCGGGCGCTCGTCAGCTTTAGGGAGCACTTCATCTCGGAACATGAAACTGCGGCCGCCCGCCCCGCTTCCACTGATTCAGAAGATTCAGAACTCTCCGCGGAGACCGAGGAGTGTAGCTCCGAGGCCGGCCCGCCCGGAGCGCGCGACGTGGAGCAGTTCGACGACCTGAGCCAGCGGAACATGCGCAGGAACCGCATGGACGAGGAGACGCGCGCCGAGCTGAGCCTGGCGCGGCGGAAGGTCGACGGGAAGACGCTCTACGCGTGCTCGATATGCGACCGCAGCCTGAGCTCGCGCTACACCTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCCTGCGTGTGCCACCTCTGCGGCAAGCAGTTCCGCGCGCCGCCCGGCCTCCGCCGCCACCTCGCGCACACGCACGAGCGCCGCCGCCCCCGCGCCTGCCCGCTCTGCCACCGCGCCTTCGCCTCCGCGCAGAACCTCAAGCAGCACCTGCGCACGCACACCGGCGAGCGCCCCTACGCCTGCCCCGCCTGCCCCAAGCGCTTCACGCAGAGCGGCTCCCTGCACGTGCACCTCAAGTCGCACGCCGCGGCCGCGCCCCACCGCTGCCCCGACTGCGGCAAGCGCTTCAAGCTGCGCTCCAACATGACCCGCCACCGCCTCAACCACTCCGGCGAGCGACCCCACGCCTGTGTCCACTGCGGCAAGACCTTCCGGCAGCGACACGAGCTCAACTGCCACGTGCTGTCCCACCTGGAGACCAACCCGCACAGCTGCCAGAACTGCGGGGCCGCCTTCGCGCAGCGCCGGGCGCTCCGGACCCACCGCCGCCCCCACGCCTGCCACGTCTGCTCCAAGACATTCTCCAGAAAGAGTCATCTCGAGGATCACGTAAAGTCGCACTCCGAGCGCCGGGAGTACGTGTGCGACGTGTGCGGGAAGGCGTCCAAGTACGGCGCCGCGCTGCGGATGCACAGGAAGACGCACGATGTCTGCAAACACAAGTGTCTGGAGTGCAGCGCCACGTTCAAGAGGAAGGTGGAGCTGCAGGCGCACGTGAGCGTGCACACCGGGGAGAGGGCGCACGTGTGCCGCTGCGGGAGAGCCTTCCGACTGCGCGGACAGCTCAACGGCCACCGCAAGCGCTGCGCCGCGCCCGACGCGTCGGCAGAAGCCCCGGACTTCGCCCAGCCGATGGATCTCCCTGAAGCCTCCGCCTCTCTCGAGCGGATCATCTGCTGTGTGTACTGCGGCGAGCACTGTCCGCAGACCCAGTACAGACGCCACGTGGTCTCCGAGCACGCCGAACGAATCTTCCACTGCGAAGACTGCGACAGCTACGTCGACCGCGAGATCTTCATCCCGCACATGTCGTCCCACGCCATGCTGTACGCGCGCCAGGCCCAGGAGGAGCGCGCCCGCAGGGAGGCCGCGCGGCAGGAGGCGGTGCGGCGCGAGGCCGCCCTGCTCGCACGCATTAAACGGGACGTCAGCGAGGAGCCCGAGCCCCGCCCCCCCAGCGCTGCTGACGACGGTCTCGTCGAAGAGCCGGAACCCGAACTCCTCCAAGCGGAGTCGGCCGCCGATCCCGGAGGTTTCTCCGAACACAGCGACGACGATCGCTCCGAGCCCGTACCGGACGAGGTGCCGCGTGCTCTCGAAGACGAACGGGAGGCACCTGCGAAGCCCCAGACCGTGCCCCCGGAGCGCCCGGCCCGCGCCTGTCCCGTCTGCGGCAAGACGTACCGCGCCGCCTCCAGCTACTTCTACCACGTGAAGCACGCGCACGGAGCCGAGCGCGCGCACGCGTGCCCGCACTGCGACAAGAAGTTCACCACGCGCGCGGCGCTGCGGGAGCACGGCGCCGTGCACTCGGGCGAGCGGCGCCACGCCTGCCAGCTGTGCGGCAAGCGGTTCGGCTCGCGGGCCGGCCTCTACATCCACGCGCAGACGCACGGCAGCACGCGCCAGCACCACTGCGCCACGTGCGGCGCGGCCTTCCGCTGGCGGACGCAGCTGCAGCGCCACCAGCGCCGCCACGCGCCCGCGCGCCCGCACGCCTGCGAGCTGTGTGCCCGCGCCTTCCGCGCGCGCGCCGACCTGCAGCGGCACCGCCACACGCACGCCGCGCGCCGCCTGCGCTGCCCGCGCTGCGACGCCACCTTCGCGCAGCCCCGCTACCTGCGGGTGCACCTGCGCAACAAGCACGCCGCCGCGTGA

Protein

MMQCVTAKMATGVVVNQPANSKPASPIDRDLKQFDNICRTCAQPADYLIPIFEGEGLKKNLPELINKHLPIMVSPDDGMPHVLCYHCATTVLAWHELKHICVHADEALRQRFQVLQAPIADEFEKQQQFIQQISAEQEKSDSKMEFYENFKMVLNKYLSELNIAVHGDMEFVCLKCDEQHSRMSSQLLAEHCNTVHCFDVDKLETFIKEYVIIEESLAFSSGDSDKDDRSVNPDKEPLPNYNCSYCECIFSSVSRLVFHLNSHKENPKKDGVMCCKELYTDNKELRKHLQKEHTSTAESNICRSCGYKTDSAGLLQKHIFEQHNNCKASKNTKVEQSIKNQKYIPAVCPECNKTFSNKYNMFVHMKSHSDPHATHGCDQCARTYRSAATLRAHRRLAHRGLMPHPCPRCGEPFPTRAARDLHACLHSGHRPYHCPQCGKSYRAKNTLDRHMEMHQNIRKYECQICSKKLPPRPKFRPRDTELSKEPSDADKYSDDPADDEDEPLSVAASRKSSELYESFYRALVSFREHFISEHETAAARPASTDSEDSELSAETEECSSEAGPPGARDVEQFDDLSQRNMRRNRMDEETRAELSLARRKVDGKTLYACSICDRSLSSRYTYLFHKRIHTGERPCVCHLCGKQFRAPPGLRRHLAHTHERRRPRACPLCHRAFASAQNLKQHLRTHTGERPYACPACPKRFTQSGSLHVHLKSHAAAAPHRCPDCGKRFKLRSNMTRHRLNHSGERPHACVHCGKTFRQRHELNCHVLSHLETNPHSCQNCGAAFAQRRALRTHRRPHACHVCSKTFSRKSHLEDHVKSHSERREYVCDVCGKASKYGAALRMHRKTHDVCKHKCLECSATFKRKVELQAHVSVHTGERAHVCRCGRAFRLRGQLNGHRKRCAAPDASAEAPDFAQPMDLPEASASLERIICCVYCGEHCPQTQYRRHVVSEHAERIFHCEDCDSYVDREIFIPHMSSHAMLYARQAQEERARREAARQEAVRREAALLARIKRDVSEEPEPRPPSAADDGLVEEPEPELLQAESAADPGGFSEHSDDDRSEPVPDEVPRALEDEREAPAKPQTVPPERPARACPVCGKTYRAASSYFYHVKHAHGAERAHACPHCDKKFTTRAALREHGAVHSGERRHACQLCGKRFGSRAGLYIHAQTHGSTRQHHCATCGAAFRWRTQLQRHQRRHAPARPHACELCARAFRARADLQRHRHTHAARRLRCPRCDATFAQPRYLRVHLRNKHAAA

Uniprot

H9IU62 A0A212EHA2 A0A2H1W4Y3

Pubmed

19121390 22118469

EMBL

BABH01034183 BABH01034184 BABH01034185 AGBW02014918 OWR40865.1 ODYU01006241 + More
SOQ47902.1

Proteomes

UP000005204 UP000007151

PRIDE

H9IU62

Pfam

PF00096 zf-C2H2 + More
PF07776 zf-AD

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type
IPR012934   Znf_AD

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9IU62 A0A212EHA2 A0A2H1W4Y3

PDB

5V3M E-value=4.60229e-40, Score=418

KEGG

101737992 no KO assigned | (RefSeq) zinc finger protein 433-like

GO

GO:0003676 GO:0008270 GO:0005634 GO:0046872 GO:0004672 GO:0004697 GO:0007154 GO:0016020 GO:0005112 GO:0015930

Length:

1258

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00114

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00006

outside

1 - 1258

Pi

255.216257

Theta

195.521626

Tajima's D

0.835218

CLR

0.033752

CSRT

0.612519374031298

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics