Gene

KWMTBOMO14912  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000778

Annotation

PREDICTED:_pinin_[Amyelois_transitella]

Location

Bomo_Chr25(-):265702-269792      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.803

CDS

ATGGGGACAGAAGTAGCTATATCTTTTAGTTCTTTACGAGCACAACTAGAGAACGAGAAGAGTAACCTCTTTAAACTAGATGAAAACATTAAAAAGATTGTTCAAACCACAGGACGCTTTGCGAATGATAGATTTAACTCAGGAGACTATCCTAGAGGTGGCAATCGTATCGGAAACAGAAATTCTTTTACAGAAAGCGGTAACAACTTCAAACCTGATGAGCAATTTGGAAAACGTAAACAGGAGACAAAAACTGTATTTAGCAGAATATCAGCAAGAGCTGACAATAGTGATGGTGAGGATGACTTACCAACGAACAAAAGAGTTCGGGTGTCATCAGCAGTGTGTAGAGAACTACCAACAAGAGCAGCAATCCTTAAAGCACAGGGTGATGATGAACAGGCACGCACACGGAATAGAAGAATTTTTGGTTCCTTACTTGGTACATTACAGAAATTTAAACAGGAAGAAATTGAATTGCAGACTAAGGAAGATAAGAAAGCACAAGTTGAAAGGAAAATAGAAGAGCAAGCAAGATTACAAAAGGAAAAAGAATTTAGAGAGAGAAAAGTAATGTTTGCAGAAAGAGAACAGAAGAAAGCCACAATAAAAGCATTAGAAGCAAAGATGGGTCGAGTACAAGAATTTGAGATCTGGGAGACAACCCAGAAGAACCTTAGGAATTTTATATTGACTAAAGCAAAGCCGCATGTATACTGGATGCCGAAGAAGTTGAATGATAAAGCGAAAGAAAAGTTGGACTTGAGTCAGATGTACCATGATAAATGTGTTATAAAGAAACGCGAAGAACTTCAAGATGAATTATCTCGTATAGAACAACGCTGCACTAAACGTTTCCACCAACAAGGGCCGGAACAGAATGGACAGCAAGTTAAGGAGGAAAAACCAGATAAAAAGACGAGAGACAAGTTTGCAGCTGACACTGAAAGAGATGACAGTGATGCTGATGGACCGGATGAGGATACTCACGAAGACACCACTATGACACATTCAAATCAAGAAGAGACGATAAAACAAGAAAATACACCAGAAATTGTTGAACCACAAGATAGAAATATAAAAGATGATGAAGGTAAAATAATTGAAAAACCATCAGAGGTGAATGACAATCCTAAAAACGACGAAGTTTCCACCGAAACAACAGAAGAAGTTATTAATCAATCTTAG

Protein

MGTEVAISFSSLRAQLENEKSNLFKLDENIKKIVQTTGRFANDRFNSGDYPRGGNRIGNRNSFTESGNNFKPDEQFGKRKQETKTVFSRISARADNSDGEDDLPTNKRVRVSSAVCRELPTRAAILKAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIELQTKEDKKAQVERKIEEQARLQKEKEFRERKVMFAEREQKKATIKALEAKMGRVQEFEIWETTQKNLRNFILTKAKPHVYWMPKKLNDKAKEKLDLSQMYHDKCVIKKREELQDELSRIEQRCTKRFHQQGPEQNGQQVKEEKPDKKTRDKFAADTERDDSDADGPDEDTHEDTTMTHSNQEETIKQENTPEIVEPQDRNIKDDEGKIIEKPSEVNDNPKNDEVSTETTEEVINQS

Uniprot

H9IU48   A0A2W1BT23   A0A2H1W131   A0A1E1WHX1   A0A194RHM6   A0A194PFJ6   + More
A0A212EGZ3   A0A1S4FZB6   Q16IW4   A0A1Y1LJS3   U5ETU7   A0A0T6B0J5   N6TZF7   A0A1W4XA75   A0A336ML47   A0A1B6D1H6   A0A1B6E5Z7   D6WR51   A0A1Q3EXZ4   A0A1B6H7J4   A0A1B6IZX6   A0A1B6IY81   B0W8H0   A0A2J7QS00   A0A067R5H5   A0A1L8DB15   A0A1B0CR85   A0A1L8E510   A0A1B0GMX1   A0A2M4BM66   A0A2M4BM65   A0A182NL85   A0A182JAN5   B4NK05   A0A182JZN8   A0A182FAW5   A0A182MQR6   A0A182XXH9   A0A182RJ64   A0A182VXP1   A0A182QUK1   A0A084W9I2   A0A1I8MA65   A0A0M4F213   B4PVD7   B4JHQ0   A0A1I8PZC3   B3NZL5   V5IAB3   A0A1A9VFT9   A0A1A9ZZ44   A0A1B0FIA8   A0A1A9YSZ8   A0A182PBF3   A0A1B0B2J8   A0A0C9S1Z0   B4MC87   A0A1S3CZN8   A0A1S4EAT3   A0A210Q0B2  

Pubmed

19121390    28756777    26354079    22118469    17510324    28004739    + More
23537049    18362917    19820115    24845553    17994087    25244985    24438588    25315136    17550304    28812685   

EMBL

BABH01034161    KZ149945    PZC76785.1    ODYU01005693    SOQ46805.1    GDQN01004459    + More
JAT86595.1    KQ460205    KPJ17067.1    KQ459604    KPI92146.1    AGBW02014998    OWR40742.1    CH478048    EAT34213.1    GEZM01060102    JAV71267.1    GANO01004194    JAB55677.1    LJIG01016436    KRT80606.1    APGK01045628    KB741037    KB632319    ENN74665.1    ERL92291.1    UFQT01001605    SSX31144.1    GEDC01017771    JAS19527.1    GEDC01003938    JAS33360.1    KQ971354    EFA07683.2    GFDL01014858    JAV20187.1    GECU01037115    JAS70591.1    GECU01015247    JAS92459.1    GECU01015819    JAS91887.1    DS231859    EDS39020.1    NEVH01011882    PNF31346.1    KK852730    KDR17520.1    GFDF01010435    JAV03649.1    AJWK01024488    GFDF01000256    JAV13828.1    AJVK01027769    GGFJ01005039    MBW54180.1    GGFJ01005038    MBW54179.1    CH964272    EDW84007.1    AXCM01007391    AXCN02000111    ATLV01021809    ATLV01021810    KE525323    KFB46876.1    CP012526    ALC45412.1    CM000160    EDW96710.2    CH916369    EDV93889.1    CH954181    EDV49725.1    GALX01001485    JAB66981.1    CCAG010001331    JXJN01007683    GBYB01014861    JAG84628.1    CH940657    EDW63169.2    NEDP02005311    OWF42193.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000008820    UP000019118    + More
UP000030742    UP000192223    UP000007266    UP000002320    UP000235965    UP000027135    UP000092461    UP000092462    UP000075884    UP000075880    UP000007798    UP000075881    UP000069272    UP000075883    UP000076408    UP000075900    UP000075920    UP000075886    UP000030765    UP000095301    UP000092553    UP000002282    UP000001070    UP000095300    UP000008711    UP000078200    UP000092445    UP000092444    UP000092443    UP000075885    UP000092460    UP000008792    UP000079169    UP000242188   

PRIDE

H9IU48   

Pfam

PF04696   Pinin_SDK_memA        + More
PF04697   Pinin_SDK_N

Interpro

IPR039853   Pinin        + More
IPR006786   Pinin_SDK_MemA       
IPR006787   Pinin_SDK_N       
IPR016024   ARM-type_fold       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

H9IU48   A0A2W1BT23   A0A2H1W131   A0A1E1WHX1   A0A194RHM6   A0A194PFJ6   + More
A0A212EGZ3   A0A1S4FZB6   Q16IW4   A0A1Y1LJS3   U5ETU7   A0A0T6B0J5   N6TZF7   A0A1W4XA75   A0A336ML47   A0A1B6D1H6   A0A1B6E5Z7   D6WR51   A0A1Q3EXZ4   A0A1B6H7J4   A0A1B6IZX6   A0A1B6IY81   B0W8H0   A0A2J7QS00   A0A067R5H5   A0A1L8DB15   A0A1B0CR85   A0A1L8E510   A0A1B0GMX1   A0A2M4BM66   A0A2M4BM65   A0A182NL85   A0A182JAN5   B4NK05   A0A182JZN8   A0A182FAW5   A0A182MQR6   A0A182XXH9   A0A182RJ64   A0A182VXP1   A0A182QUK1   A0A084W9I2   A0A1I8MA65   A0A0M4F213   B4PVD7   B4JHQ0   A0A1I8PZC3   B3NZL5   V5IAB3   A0A1A9VFT9   A0A1A9ZZ44   A0A1B0FIA8   A0A1A9YSZ8   A0A182PBF3   A0A1B0B2J8   A0A0C9S1Z0   B4MC87   A0A1S3CZN8   A0A1S4EAT3   A0A210Q0B2  

KEGG

101743394    K13114 pinin | (RefSeq) pinin

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)
03015    mRNA surveillance pathway - Bombyx mori (domestic silkworm)

GO

GO:0035145   GO:0071013  

PANTHER

PTHR12707  

Length:

395

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00326

outside

1  -  395

 

 

Pi

229.038887

Theta

177.894868

Tajima's D

1.160797

CLR

0.000316

CSRT

0.707664616769162

Interpretation

Uncertain