SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14900
Annotation
PREDICTED:_transcription_elongation_regulator_1-like?_partial_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.741 Nuclear   Reliability : 1.521
 

Sequence

CDS
ATGCCACTGGCGGCCGCCCGCTTTCTGTACATCCGTCGTCACAATATAAAATCCTTGATAGCCGCCGAGAAGGGCGAGAAATATCCTAATATAGAAATAGATCCCAGCAAAATAGTGGTCATCGACGTTGAAGAGGACGAGGAACCGCAGAGCAACACCGATGCGGAGAAGGAAGCCGCCGCCGCCGAGAAGGAGAAGCAGAAAGAGGAGAAGGAAAAGGCGGAGAAGGAGCGACTCGAGAAGGAAAAGGCGGACAAGGAGAAGACCGAGAAGGAAGCTGCCGAGAAGGAGAAGGCGAAGCACGGCAGGAGACCCATCTCTACCACGCCCATCGTAGGAACGCCTTGGTGCGTCGTGTGGACGGACGACGGGCGCGTGTTCTTCCACAACCCCACCGAGCTCACGTCCGTGTGGGACCGCCCCGAGCTGCTCATCGGCCGCCCCGACGTGGACCGCGCCGTCACCAACCCGCCCGCCGCCGTGCTCGACCTGCTGCGCATCACGTCCACCGTGGGCGGCAAGGAGTCGGAGCCCGGCGTGTCCAGCACCACGCCCTCCGTCACCAGCACCGCCGACACCAAGCGCCCGGCCGACGCCGACGCGGACGCCGCCGCCGCCGCCGCCACCGCCGCCAAGAAACCAAAGATTGAAGAAAGTTAG
Protein
MPLAAARFLYIRRHNIKSLIAAEKGEKYPNIEIDPSKIVVIDVEEDEEPQSNTDAEKEAAAAEKEKQKEEKEKAEKERLEKEKADKEKTEKEAAEKEKAKHGRRPISTTPIVGTPWCVVWTDDGRVFFHNPTELTSVWDRPELLIGRPDVDRAVTNPPAAVLDLLRITSTVGGKESEPGVSSTTPSVTSTADTKRPADADADAAAAAATAAKKPKIEES

Summary

Uniprot
ProteinModelPortal
PDB
2DK7     E-value=1.13279e-14,     Score=191

Ontologies

Topology

Length:
219
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00075
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02151
outside
1  -  219
 
 

Population Genetic Test Statistics

Pi
173.942355
Theta
151.362214
Tajima's D
0.238664
CLR
0.615527
CSRT
0.436778161091945
Interpretation
Uncertain
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