SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14897
Pre Gene Modal
BGIBMGA012176
Annotation
PREDICTED:_zinc_finger_protein_845-like_[Papilio_machaon]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.046
 

Sequence

CDS
ATGACTTGGAACAGCTGTCGCACCTGTTTAAGCATCCAGAATTTAAATCCTATATTCCCTATGCCGGAACACCATGAAAAATATACAAATGTTATATTATCCACCACAGGAGTTAAGGTGGAACTGAACGATGAGTATCCACAAGTAATGTGTACATCGTGCATACAACTGATAAATGATTCATACAAGTTCCGGAAGAAGTGTGAGCAGACCCAGCAGATACTACAGAGCAGCACCCACACACGAGACGGTGTAGTTAAAACTGAAATGCAGTCACAGAGCGATGCCACATACACTTTTATTGATATTTCGGATTTAATAATTGATTTGGACACGACAAATGCCAACGAAGATGAAACAAATACTAGTATAGAAGAAGAAAAAAAGTTAAATAAGAAAAAGGAGAAAGTTAAAAAGAAAGAGAAGAAGGATGTGAAAGTGAAAGAGAAGATAGAGTGTGAACATTGTCACAAGATATTAACTTCCAAACTGTCACTGCGGAATCATTATAAAATACACACCGGGTTTGATGTGGTCTGCGAGCACTGCGGTAAAAAGTTCATAACGCGGAGGCTGCTGCTGATGCACTGCCGGGCCAAGCACGGCTATGAGAAGACGGACAAGTGCTCCTACTGCGACTACCGGGCCTCCAACGCCGAGCAGGTCAAAATCCACGAGCGGCTGCACACCGGGGAGCGCCCGTTCGTGTGCGCGCAGTGCGGTGCCGCCTTCCACCGGCGAAGCACCCACCTGCAGCACGTCGCCACGCACCTGCCCGACCGCCCCGTGCCCTGCCCGCACTGCCCCGCGCGCTTCCAGACCACCACCCTCATGCGCATCCACCGCAGCCGCCACGCCGCCCCGCCCGCGCGCTGGCGCTGCGCCCTGTGCGAGGGGCGCTTCGCCCGCCGCCGCACCGCCCTGCGACACCTGCTGCGGGCGCACGCGCTACAGGACCCCGCGCTGCTGCACAAGGACACCGCGCCCTGA
Protein
MTWNSCRTCLSIQNLNPIFPMPEHHEKYTNVILSTTGVKVELNDEYPQVMCTSCIQLINDSYKFRKKCEQTQQILQSSTHTRDGVVKTEMQSQSDATYTFIDISDLIIDLDTTNANEDETNTSIEEEKKLNKKKEKVKKKEKKDVKVKEKIECEHCHKILTSKLSLRNHYKIHTGFDVVCEHCGKKFITRRLLLMHCRAKHGYEKTDKCSYCDYRASNAEQVKIHERLHTGERPFVCAQCGAAFHRRSTHLQHVATHLPDRPVPCPHCPARFQTTTLMRIHRSRHAAPPARWRCALCEGRFARRRTALRHLLRAHALQDPALLHKDTAP

Summary

Uniprot
Pfam
PF07776   zf-AD
Interpro
IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
ProteinModelPortal
PDB
5T0U     E-value=5.98854e-15,     Score=196

Ontologies

Topology

Length:
329
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06919
outside
1  -  329
 
 

Population Genetic Test Statistics

Pi
64.12014
Theta
178.14254
Tajima's D
0.281352
CLR
0.589498
CSRT
0.448327583620819
Interpretation
Uncertain
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