Gene

KWMTBOMO14894

Pre Gene Modal

BGIBMGA012173

Annotation

PREDICTED:_transmembrane_emp24_domain-containing_protein_5-like_[Papilio_machaon]

Location

Bomo_Chr24(+):17221241-17227334      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.334 Nuclear   Reliability : 1.828

CDS

ATGCGTTACATATATTTGACTACTATTTTCAGTGTTGTTTTTGCCTTTGAAAAAGATATAACTTTTACTGTTCAAGCAGGAATGACCGACTGTTTCTACCAGAGAGCACAGCCGAACGAGTTAATAGACATAGAATATCAGGTAATAGATGCAACACATGGTGAATTGGACATATCATTTCAACTCACTGACCCTGTTGGACGGGTAATAGTCTCCGACTACAAGAAGCCAGAGAACTCTCACAGGCATCAAGCCACCTTAAATGGAGACTACAGATTTTGTTTTGACAACACATTCAGCACGTTTAGTCAGAAAACTGTATTTTTCGACATATTAATAGACAATGAGGAGACAGAGGAGAAAGATTATGATGACGACAAAGAAATGGAACTTGGTACTGCAGCCGAGAGCTACATAATGAGGGTGAGGGATATAGCGGAGTCCGTGAACCGGGTGAGGGACAACGTGTCCGCGGCCAAGAGACTCCAAGAGTTGCAGTCCGCGCACGAGGCCAGAGACAGGAACATCGCTGAGGAGATGTGCGACAGGGTCATGAGATGGTCCATCATTCAGATGGTGCTGATGGTGATGGTCGGGGCCACACAGGTTTTATTTTTGAAGAGCTTATTTGAAGACAAAAGTGACTACAGAAAGTTAATACCGGGCTTGTCGAAGTGA

Protein

MRYIYLTTIFSVVFAFEKDITFTVQAGMTDCFYQRAQPNELIDIEYQVIDATHGELDISFQLTDPVGRVIVSDYKKPENSHRHQATLNGDYRFCFDNTFSTFSQKTVFFDILIDNEETEEKDYDDDKEMELGTAAESYIMRVRDIAESVNRVRDNVSAAKRLQELQSAHEARDRNIAEEMCDRVMRWSIIQMVLMVMVGATQVLFLKSLFEDKSDYRKLIPGLSK

Similarity

Belongs to the EMP24/GP25L family.

Uniprot

A0A2A4J199   A0A1E1VYX4   A0A0N0PDZ8   A0A0N1IN27   A0A212EJU7   S4P0N8   + More
A0A0L7KYY2   A0A2H1W971   A0A2H1V7T2   W8BUG5   A0A0L0C8M2   A0A0Q9W6R0   A0A1B0D0C5   B4M8E0   A0A034WSS8   A0A0C9Q9X2   B4L249   A0A0M3QZH7   T1PLG6   A0A1I8NED4   A0A0K8WDN0   A0A182FRQ5   B3NUV9   B4R4X9   B4IJ90   Q9VXY9   Q8T8Q0   B4H2I8   B4MTB6   B4PW98   A0A1L8DUK8   A0A1L8DUL5   A0A1I8P0W0   D6WA28   A0A3F2Z4M5   A0A182SG64   A0A1W4X7C5   A0A1W4VH74   A0NH34   A0A3B0J6G0   A0A3B0J7F6   B4JL11   A0A067RKZ2   Q29II3   W5JBX8   A0A2C9H8G9   A0A2C9GQL3   B3MY78   A0A1A9VRV4   A0A1A9ZIE3   A0A1B0FHY7   A0A0R3P3N6   A0A1Q3FFI5   A0A182PGY4   B0WMQ0   A0A182NQC8   A0A182PZM1   A0A182M7X7   A0A182JTM2   A0A182YB80   A0A182L9D5   A0A0T6ATT4   A0A182GFP4   A0A023EKC6   A0A084W542   A0A182TDS5   A0A1S4G0M7   A0A182UWC2   Q16HH1   A0A336K2L2   T1JJH8   V5FYD6   A0A0P4WAG1   A0A182R4Z4   A0A1J1J3M5   A0A1Y1MGC1   Q8VCE7   H3B3B3   H3B3B2   A0A2Y9EY83   A0A1S3ADH9   A0A1S3ADC6   A0A3R7PT67   A0A1S3FCX2   A0A1A8FAE2   A0A3Q3VYF5   A0A3B3UJD0   G3NQ72   A0A3B5LLN9   M4A9V4   A0A1L8GG75   G3NQ60   A0A2I4D201   Q7T2E9   A0A1W4WWR1   A0A0R4IWV5   A0A2P6KFZ6   A0A1A8P5W8   A0A1A8PFK1  

Pubmed

26354079    22118469    23622113    26227816    24495485    26108605    + More
17994087    25348373    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    18362917    19820115    12364791    14747013    17210077    24845553    15632085    20920257    23761445    25244985    20966253    26483478    24945155    24438588    17510324    28004739    15489334    9215903    23542700    27762356    23594743   

EMBL

NWSH01004077    PCG65506.1    GDQN01011129    JAT79925.1    KQ459988    KPJ18792.1    + More
KQ458863    KPJ04722.1    AGBW02014393    OWR41756.1    GAIX01009256    JAA83304.1    JTDY01004267    KOB68360.1    ODYU01006826    SOQ49034.1    ODYU01001096    SOQ36846.1    GAMC01001585    GAMC01001583    JAC04971.1    JRES01000749    KNC28788.1    CH940653    KRF80636.1    AJVK01002392    EDW62416.1    GAKP01000326    JAC58626.1    GBYB01011188    JAG80955.1    CH933810    EDW06789.2    CP012528    ALC49443.1    KA648793    AFP63422.1    GDHF01003145    JAI49169.1    CH954180    EDV47057.1    CM000366    EDX17936.1    CH480847    EDW51069.1    AE014298    AAF48417.2    AAN09654.1    AY075584    AAL68388.2    CH479204    EDW30555.1    CH963851    EDW75355.1    CM000162    EDX01729.1    GFDF01003968    JAV10116.1    GFDF01003967    JAV10117.1    KQ971312    EEZ98577.1    JXJN01000737    AAAB01008987    EAU75684.1    EGK97556.1    OUUW01000003    SPP77734.1    SPP77735.1    CH916370    EDW00264.1    KK852564    KDR21270.1    CH379063    EAL32670.2    ADMH02001952    ETN60309.1    APCN01000879    CH902632    EDV32572.1    CCAG010013227    KRT06237.1    GFDL01008734    JAV26311.1    DS232000    EDS31135.1    AXCN02001525    AXCM01007623    LJIG01022834    KRT78474.1    JXUM01010684    KQ560314    KXJ83097.1    GAPW01004008    JAC09590.1    ATLV01020477    ATLV01020478    KE525302    KFB45336.1    CH478170    EAT33697.1    UFQS01000065    UFQT01000065    SSW98929.1    SSX19315.1    JH431783    GALX01005776    JAB62690.1    GDRN01060058    JAI65437.1    CVRI01000066    CRL06062.1    GEZM01034628    GEZM01034627    JAV83690.1    BC020076    AAH20076.1    AFYH01093906    AFYH01093907    QCYY01000905    ROT81903.1    HAEB01008582    HAEC01013339    SBQ55109.1    CM004473    OCT82851.1    BX470128    BC054575    AAH54575.1    MWRG01012993    PRD25248.1    HAEI01001509    HAEH01010198    SBR76474.1    HAEF01007413    HAEG01007724    SBR79998.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    UP000037069    + More
UP000008792    UP000092462    UP000009192    UP000092553    UP000095301    UP000069272    UP000008711    UP000000304    UP000001292    UP000000803    UP000008744    UP000007798    UP000002282    UP000095300    UP000007266    UP000092460    UP000075901    UP000192223    UP000192221    UP000007062    UP000268350    UP000001070    UP000027135    UP000001819    UP000000673    UP000076407    UP000075840    UP000007801    UP000078200    UP000092445    UP000092444    UP000075885    UP000002320    UP000075884    UP000075886    UP000075883    UP000075881    UP000076408    UP000075882    UP000069940    UP000249989    UP000030765    UP000075902    UP000075903    UP000008820    UP000075900    UP000183832    UP000008672    UP000248484    UP000079721    UP000283509    UP000081671    UP000261620    UP000261500    UP000007635    UP000261380    UP000002852    UP000186698    UP000192220    UP000000437   

PRIDE

Q9VXY9    Q8T8Q0    Q8VCE7   

Pfam

PF01105   EMP24_GP25L

Interpro

IPR036598   GOLD_dom_sf        + More
IPR015720   TMP21-related       
IPR009038   GOLD_dom       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR030397   SEPARIN_core_dom       
IPR015717   TMED5       

SUPFAM

SSF101576   SSF101576        + More
SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2A4J199   A0A1E1VYX4   A0A0N0PDZ8   A0A0N1IN27   A0A212EJU7   S4P0N8   + More
A0A0L7KYY2   A0A2H1W971   A0A2H1V7T2   W8BUG5   A0A0L0C8M2   A0A0Q9W6R0   A0A1B0D0C5   B4M8E0   A0A034WSS8   A0A0C9Q9X2   B4L249   A0A0M3QZH7   T1PLG6   A0A1I8NED4   A0A0K8WDN0   A0A182FRQ5   B3NUV9   B4R4X9   B4IJ90   Q9VXY9   Q8T8Q0   B4H2I8   B4MTB6   B4PW98   A0A1L8DUK8   A0A1L8DUL5   A0A1I8P0W0   D6WA28   A0A3F2Z4M5   A0A182SG64   A0A1W4X7C5   A0A1W4VH74   A0NH34   A0A3B0J6G0   A0A3B0J7F6   B4JL11   A0A067RKZ2   Q29II3   W5JBX8   A0A2C9H8G9   A0A2C9GQL3   B3MY78   A0A1A9VRV4   A0A1A9ZIE3   A0A1B0FHY7   A0A0R3P3N6   A0A1Q3FFI5   A0A182PGY4   B0WMQ0   A0A182NQC8   A0A182PZM1   A0A182M7X7   A0A182JTM2   A0A182YB80   A0A182L9D5   A0A0T6ATT4   A0A182GFP4   A0A023EKC6   A0A084W542   A0A182TDS5   A0A1S4G0M7   A0A182UWC2   Q16HH1   A0A336K2L2   T1JJH8   V5FYD6   A0A0P4WAG1   A0A182R4Z4   A0A1J1J3M5   A0A1Y1MGC1   Q8VCE7   H3B3B3   H3B3B2   A0A2Y9EY83   A0A1S3ADH9   A0A1S3ADC6   A0A3R7PT67   A0A1S3FCX2   A0A1A8FAE2   A0A3Q3VYF5   A0A3B3UJD0   G3NQ72   A0A3B5LLN9   M4A9V4   A0A1L8GG75   G3NQ60   A0A2I4D201   Q7T2E9   A0A1W4WWR1   A0A0R4IWV5   A0A2P6KFZ6   A0A1A8P5W8   A0A1A8PFK1  

PDB

5GU5     E-value=7.40872e-20,     Score=236

KEGG

101746327    K14825 p24 family protein gamma-2 | (RefSeq) transmembrane emp24 domain-containing protein 5-like

GO

GO:0016021   GO:0048042   GO:0006888   GO:0005793   GO:0000137   GO:0061355   GO:0005783   GO:0048193   GO:0005215   GO:0006886   GO:0005794   GO:0030134   GO:0007030   GO:0008233   GO:0005801   GO:0070971   GO:0090161   GO:0006810   GO:0051082   GO:0003676   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR22811   PTHR22811:SF41  

Subcellular location

Membrane  

SignalP

Position:   1 - 15,         Likelihood:  0.896025

 

 

Length:

225

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.13067

Exp number, first 60 AAs:

0.50611

Total prob of N-in:

0.78984

inside

1  -  183

TMhelix

184  -  206

outside

207  -  225

 

 

Pi

202.419585

Theta

173.750714

Tajima's D

0.879235

CLR

0.026139

CSRT

0.628068596570171

Interpretation

Uncertain