SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14891
Pre Gene Modal
BGIBMGA012180
Annotation
PREDICTED:_uncharacterized_protein_LOC101746752_isoform_X3_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 2.991
 

Sequence

CDS
ATGTCAAGAAGCGGCAATTGTTTGATTTGGGACTATTTCCAAAAGAACCAGGAGGATAAAATCGCCGAGTGCAATATATGCTTGAAGAGTTTATCGTACAAGACGACGATTACGAATCTAAAACAGCACTTAAGACTCAAACATAAGAGCGCTTTTAAGGAACTCGTCTCCCGGGGTCCGTGGTACCGGGGCAAGTCCGCAGCCGCGCGCTCGAAGGCTTCGTGCACGTCAACACTAGATACCGACTCTGACAGCATGGAAGTAAGCGAAATAGACTTGTGGTGTCACTTCGAGCAGGAGACGGGCGGCCGCGCGCGGTGCAGACACTGCCACCAGTCCCATGACATCGGCGAGATGGAGAAGCACCTGATAAAAGCGCACTACGAAGTTTTCGAGGACGAGGCCCAGGTACCCAATGTTGAAGAGGAATGCCTCCCTGGGAATGCGCTTCCAGGTCTGGGGGCTCGAAGCGTCTCGACTACACTGCGCCGTGGTGGACTCGCTCGCTCTCTTTATTAG
Protein
MSRSGNCLIWDYFQKNQEDKIAECNICLKSLSYKTTITNLKQHLRLKHKSAFKELVSRGPWYRGKSAAARSKASCTSTLDTDSDSMEVSEIDLWCHFEQETGGRARCRHCHQSHDIGEMEKHLIKAHYEVFEDEAQVPNVEEECLPGNALPGLGARSVSTTLRRGGLARSLY

Summary

Pfam
PF02892   zf-BED
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR003656   Znf_BED       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
172
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00076
Exp number, first 60 AAs:
0.00076
Total prob of N-in:
0.13241
outside
1  -  172
 
 

Population Genetic Test Statistics

Pi
135.069221
Theta
119.955027
Tajima's D
0.329212
CLR
0.369815
CSRT
0.461726913654317
Interpretation
Uncertain
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