Gene

KWMTBOMO14889

Pre Gene Modal

BGIBMGA012181

Annotation

PREDICTED:_UPF0669_protein_C6orf120_homolog_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):17126751-17131710      View in EpiBrowser

Full name

UPF0669 protein C6orf120 homolog      

Location in the cell

PlasmaMembrane   Reliability : 2.143

CDS

ATGCGCCGCAAATTTATAATAATACTTTTAGGAATAATATGTGCTTCGACTCTTTCGTCCTTGTTCAGCGCTTTACCAGAACGACAGCCGAATAAATTGCTTTTGAACGTTGCATCCGGAATCGTTGGCGCAGGAAACTTTACGTACTGGCATTTGGGATACACTGGACCTCTGTCGATAGAGCTGAGGTCGTTATCAGGCGACGCTGATCTTTATGTCGCATATCACATGAGACCTGGCTACGAAGTGTCCGAGAATGAATACAGCTCTACTACATGCGGTCTCGATGTTGTGTACATCCCTGATGACTATCTCAGACCGATAGGCGTCGGGATATTTGGTCACTGGGCCTACGAACAATCCGAGTACAAGATCCGCGTGTACCAGGACAATACTCCGGTGATCTACCCCAGGGTGATGGCAGGGGAGGAGACCTCCTACAAACCCAACGAGTACCCAGAAGGCGACGCTAAACGCGAAAGGCGGGACCATGAACGCAGAACTGAAGATGAAAACAAATCTAGATTCATCATTCCACTCCTGAATATACTGGATACGCTAATGGATTTTGTGTTTTTGTAA

Protein

MRRKFIIILLGIICASTLSSLFSALPERQPNKLLLNVASGIVGAGNFTYWHLGYTGPLSIELRSLSGDADLYVAYHMRPGYEVSENEYSSTTCGLDVVYIPDDYLRPIGVGIFGHWAYEQSEYKIRVYQDNTPVIYPRVMAGEETSYKPNEYPEGDAKRERRDHERRTEDENKSRFIIPLLNILDTLMDFVFL

Description

May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.

Similarity

Belongs to the UPF0669 family.

Keywords

Complete proteome   Glycoprotein   Reference proteome   Secreted   Signal   Apoptosis  

Feature

chain  UPF0669 protein C6orf120 homolog

Uniprot

H9JRM1   A0A0N0PAG3   A0A0N0PE30   A0A2W1BAE0   A0A2A4K9U9   A0A2H1W6K5   + More
A0A212EJT9   A0A091HAB0   Q5ZLK8   A0A091HYZ3   A0A091RMH8   A0A0A0AWV1   A0A093H2K8   A0A091H383   M7AZC1   A0A093ERX3   A0A226NCR9   A0A2I0UNY5   A0A151M2L6   G1NRR3   F1NYK5   A0A091UMN1   A0A091R4E3   A0A093P2X5   A0A087R6T7   A0A093PVB4   A0A2P4SJP1   A0A091NQB4   A0A093C5L3   A0A091U8B4   A0A091K9I1   A0A1U7RBP9   A0A087VKH2   A0A099ZIS3   A0A226P347   A0A091LT33   A0A091N9T1   A0A091R3B5   H0ZHH4   A0A091ST24   U3KLP7   R0L5K7   A0A3L8S8P0   A0A094NKQ3   A0A060WPD5   A0A1V4JKS3   A0A091UST0   A0A218VB29   K7F1I1   A0A2I0MV07   A0A091E9W0   A0A091XSU5   A0A0Q3PDG8   A0A3M0KHY0   A0A091JVY5   A0A3Q7NVI1   A0A093R7A3   F6WQT0   G3W693   A0A1W7RIW1   L5KEA1   A0A093J7E6   A0A3N0YFZ9   J3SFL9   T1DNN9   G1KEF0   A0A384AFK9   A0A1A6HNB4   A0A340W990   W5LTK5   A0A3Q7U305   V8NXW3   F1PR38   A0A3P8XZY0   A0A2Y9M7L2   A0A2D4MV45   Q8BPF2   A0A0F7Z140   A0A2D0RRZ7   E3TCM3   Q9DAY5   A0A060WUN5   A0A2U3WVH6   Q6AY64   Q6IQZ2   Q9D366   H0W293  

Pubmed

19121390    26354079    28756777    22118469    15642098    23624526    + More
22293439    20838655    15592404    24621616    20360741    30282656    24755649    17381049    23371554    17495919    21709235    26358130    23258410    23025625    23758969    25727380    25329095    24297900    16341006    25069045    10349636    11042159    11076861    11217851    12466851    16141073    20634964    16141072    15489334    21993624   

EMBL

BABH01031737    KQ458863    KPJ04726.1    KQ459988    KPJ18799.1    KZ150417    + More
KZ150224    PZC70944.1    PZC72075.1    NWSH01000005    PCG80987.1    ODYU01006670    SOQ48719.1    AGBW02014393    OWR41759.1    KL529752    KFO92394.1    AJ719726    KL217906    KFP00375.1    KK822816    KFQ40791.1    KL873351    KGL98441.1    KL205735    KFV73645.1    KL448131    KFO80747.1    KB594214    EMP25153.1    KK370414    KFV43257.1    MCFN01000095    OXB65385.1    KZ505670    PKU47742.1    AKHW03006780    KYO18749.1    AADN05000005    KL409753    KFQ91632.1    KK690507    KFQ16419.1    KL225298    KFW70756.1    KL226149    KFM09191.1    KL671001    KFW80718.1    PPHD01042139    POI24322.1    KL390839    KFP91551.1    KL235037    KFV08349.1    KK421687    KFQ86691.1    KK502085    KFP20421.1    KL496675    KFO13114.1    KL894475    KGL81712.1    AWGT02000203    OXB73809.1    KK764532    KFP45941.1    KK844269    KFP86196.1    KK711622    KFQ33724.1    ABQF01014711    KK484285    KFQ61473.1    AGTO01001590    KB743153    EOB00859.1    QUSF01000040    RLV98549.1    KL278524    KFZ67046.1    FR904545    CDQ66475.1    LSYS01006902    OPJ72791.1    KK463519    KFQ80552.1    MUZQ01000016    OWK63149.1    AGCU01078410    AKCR02000002    PKK33518.1    KK717998    KFO53941.1    KK735819    KFR16026.1    LMAW01003058    KQK74316.1    QRBI01000106    RMC12695.1    KK535630    KFP29327.1    KL442154    KFW94485.1    AEFK01174621    GDAY02000346    JAV51067.1    KB030789    ELK09994.1    KK570180    KFW06909.1    RJVU01044516    ROL44780.1    JU176483    GBEX01000496    AFJ52006.1    JAI14064.1    GAAZ01000372    GBKC01000517    GBKD01000334    JAA97571.1    JAG45553.1    JAG47284.1    LZPO01018132    OBS79739.1    AZIM01001474    ETE66796.1    AAEX03008651    IACM01123609    IACM01123611    LAB37310.1    AK076083    BAC36169.1    GBEW01000169    JAI10196.1    GU588103    ADO28059.1    AK005427    AK017276    AK028052    AK150772    AK167490    BC043303    BC043449    FR904739    CDQ70891.1    BC079175    BC071250    AAH71250.2    AK018298    BAB31152.1    AAKN02043515   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000000539    + More
UP000054308    UP000053858    UP000053584    UP000053760    UP000031443    UP000198323    UP000050525    UP000001645    UP000053283    UP000054081    UP000053286    UP000053258    UP000053119    UP000189705    UP000053641    UP000198419    UP000007754    UP000016665    UP000276834    UP000193380    UP000190648    UP000197619    UP000007267    UP000053872    UP000052976    UP000053605    UP000051836    UP000269221    UP000286641    UP000002280    UP000007648    UP000010552    UP000001646    UP000261681    UP000092124    UP000265300    UP000018467    UP000286640    UP000002254    UP000265140    UP000248483    UP000221080    UP000000589    UP000245340    UP000002494    UP000005447   

PRIDE

H9JRM1    Q9DAY5    Q6AY64   

Pfam

PF17065   UPF0669        + More
PF00573   Ribosomal_L4

Interpro

IPR031420   UPF0669        + More
IPR013005   Ribosomal_uL4/L1e       
IPR023574   Ribosomal_L4_dom_sf       
IPR002136   Ribosomal_L4/L1e       

SUPFAM

SSF52166   SSF52166       

Gene 3D

3.40.1370.10    

ProteinModelPortal

H9JRM1   A0A0N0PAG3   A0A0N0PE30   A0A2W1BAE0   A0A2A4K9U9   A0A2H1W6K5   + More
A0A212EJT9   A0A091HAB0   Q5ZLK8   A0A091HYZ3   A0A091RMH8   A0A0A0AWV1   A0A093H2K8   A0A091H383   M7AZC1   A0A093ERX3   A0A226NCR9   A0A2I0UNY5   A0A151M2L6   G1NRR3   F1NYK5   A0A091UMN1   A0A091R4E3   A0A093P2X5   A0A087R6T7   A0A093PVB4   A0A2P4SJP1   A0A091NQB4   A0A093C5L3   A0A091U8B4   A0A091K9I1   A0A1U7RBP9   A0A087VKH2   A0A099ZIS3   A0A226P347   A0A091LT33   A0A091N9T1   A0A091R3B5   H0ZHH4   A0A091ST24   U3KLP7   R0L5K7   A0A3L8S8P0   A0A094NKQ3   A0A060WPD5   A0A1V4JKS3   A0A091UST0   A0A218VB29   K7F1I1   A0A2I0MV07   A0A091E9W0   A0A091XSU5   A0A0Q3PDG8   A0A3M0KHY0   A0A091JVY5   A0A3Q7NVI1   A0A093R7A3   F6WQT0   G3W693   A0A1W7RIW1   L5KEA1   A0A093J7E6   A0A3N0YFZ9   J3SFL9   T1DNN9   G1KEF0   A0A384AFK9   A0A1A6HNB4   A0A340W990   W5LTK5   A0A3Q7U305   V8NXW3   F1PR38   A0A3P8XZY0   A0A2Y9M7L2   A0A2D4MV45   Q8BPF2   A0A0F7Z140   A0A2D0RRZ7   E3TCM3   Q9DAY5   A0A060WUN5   A0A2U3WVH6   Q6AY64   Q6IQZ2   Q9D366   H0W293  

KEGG

101746980    no KO assigned | (RefSeq) UPF0669 protein C6orf120 homolog

GO

GO:0005576   GO:0005840   GO:0006915  

PANTHER

PTHR31703   PTHR10746  

Subcellular location

Secreted  

SignalP

Position:   1 - 19,         Likelihood:  0.919572

 

 

Length:

193

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

30.7795

Exp number, first 60 AAs:

30.62875

Total prob of N-in:

0.64642

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  24

outside

25  -  193

 

 

Pi

225.78331

Theta

194.44695

Tajima's D

0.643044

CLR

41.297164

CSRT

0.55777211139443

Interpretation

Uncertain