Gene

KWMTBOMO14888

Pre Gene Modal

BGIBMGA012172

Annotation

PREDICTED:_thioredoxin-related_transmembrane_protein_2_homolog_[Papilio_polytes]

Location

Bomo_Chr24(+):17112691-17116635      View in EpiBrowser

Full name

Thioredoxin-related transmembrane protein 2 homolog      

Alternative Name

Thioredoxin domain-containing protein 14 homolog

Location in the cell

Mitochondrial   Reliability : 1.21

CDS

ATGTTGAGGACGAGAAAAGCGGGAAGCGTCACGATGGTGAACTATCTGTCGTCTTCGTTCGTTTATACCAAGATTGCGAACTTAATTCTGTGGTTCTACGCCGACATTAGGTACGGTCTTCCCTATGCAGCCGCGATCATACTCCTGGCTCTGCTCCTTCCGGAGCCAACGTATACAGGACCGGAACACGTCACCTACTTCCGAGGACCCGAGTCCTTGGAGGACGAGTTGAAACGCAACAAGCACGCCACCTGGGTCGTGTGTCTGTACGCAGCATGGCACCCGGCCTGCGTGAATTTCGCACCGGTCTTTGCTGAGCTATCTTCAAGCTATAGTCTGGATAATTTGAGGTTCGGCAAGCTGGATGTTGGGAGGTACCCTGGTTCCGGTCTTAAATATAAAGTGCAGGACGGGCCGACGAGTCGGCAGCTGCCCACGGTGATGGTCATGAGCGAGGGCCGGGAGAAGATGAGGAGACCGCAGCCCGACAGCACTGGGAAACTTCAGAAGTTTCTATTCTCGAAGGACAATATGAAAGCGGCGTTTGATCTCGACGGTCTGTACGCGGAGTGCAAAGAGAAACTGGCCTCCTTCAGACAGAATAAGAAGGATGAGTAG

Protein

MLRTRKAGSVTMVNYLSSSFVYTKIANLILWFYADIRYGLPYAAAIILLALLLPEPTYTGPEHVTYFRGPESLEDELKRNKHATWVVCLYAAWHPACVNFAPVFAELSSSYSLDNLRFGKLDVGRYPGSGLKYKVQDGPTSRQLPTVMVMSEGREKMRRPQPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLASFRQNKKDE

Keywords

Complete proteome   Membrane   Reference proteome   Signal   Transmembrane   Transmembrane helix  

Feature

chain  Thioredoxin-related transmembrane protein 2 homolog

Uniprot

H9JRL2   A0A2A4K9T8   A0A2H1WVZ9   A0A3S2NQR2   A0A2W1B949   A0A0N0PED9   + More
S4P8Z7   A0A212EJW1   A0A0N1IDZ6   A0A1B6MRG7   A0A1B6HNH3   A0A1B6HKI3   A0A1B6GWN6   A0A224XWZ0   A0A1B6DJK8   A0A023F9X3   A0A1L8DTN1   R4FNU6   A0A0K8TMV0   A0A1L8DTS1   A0A182QB11   A0A182KE95   A0A182HR86   A0A182LZZ8   A0A0L0C906   A0A0L7R0K1   A0A182UY66   A0A182KZ52   Q7Q132   A0A182PW38   A0A182TIS5   A0A1Y9IVU9   A0A182X2E7   A0A2A3EEG0   A0A087ZY71   T1PIK4   A0A182Y695   A0A182NP18   A0A154PHS9   A0A0K8VN13   Q16NF4   A0A1I8PPB3   A0A1I8MH82   A0A182G8V1   A0A0M9A3E0   A0A2J7PFA3   A0A034WHH4   A0A0A1XIQ7   A0A1Y1L586   A0A182J410   U5EX52   A0A0A9YN20   A0A084VSQ6   A0A1Q3FAY1   A0A1Q3FAQ1   A0A336N1M8   B3NJN0   A0A1A9WKV2   A0A1A9UPZ2   A0A1A9ZDF0   B4PB67   A0A1J1I508   A0A2M4BWF8   W5J7M2   A0A182F550   A0A151I7G4   A0A2M4AY70   B4QE41   A0A0J9U6A6   A0A0B4LFY2   Q7JW12   B3MHA4   B0W1B2   A0A026WU36   A0A1W4V4M5   B4HPI0   A0A0J7KVB7   A0A158NKA9   F4W8L0   D2A3P9   B4LQ10   B4MRS0   A0A3B0J2N5   A0A0M4EGM3   E0VPM1   E2A3S2   B4JWB1   A0A1W4XCE7   A0A232EIY7   K7J6P4   B4KT38   E2B8C9   Q28YG5   B4HC56   J9JM83   A0A1A9XFQ5   E9IBV0   A0A151WIP9   A0A0T6B9L1   A0A195FB94  

Pubmed

19121390    28756777    26354079    23622113    22118469    25474469    + More
26369729    26108605    20966253    12364791    14747013    17210077    25244985    17510324    25315136    26483478    25348373    25830018    28004739    25401762    26823975    24438588    17994087    17550304    20920257    23761445    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    24508170    30249741    21347285    21719571    18362917    19820115    20566863    20798317    28648823    20075255    15632085    21282665   

EMBL

BABH01031739    NWSH01000005    PCG80991.1    ODYU01011480    SOQ57235.1    RSAL01000140    + More
RVE46099.1    KZ150417    PZC70945.1    KQ459988    KPJ18800.1    GAIX01009270    JAA83290.1    AGBW02014393    OWR41760.1    KQ458863    KPJ04727.1    GEBQ01003543    GEBQ01003317    GEBQ01001469    JAT36434.1    JAT36660.1    JAT38508.1    GECU01031483    JAS76223.1    GECU01032514    JAS75192.1    GECZ01002918    JAS66851.1    GFTR01003925    JAW12501.1    GEDC01011419    JAS25879.1    GBBI01000989    JAC17723.1    GFDF01004262    JAV09822.1    ACPB03001553    GAHY01001149    JAA76361.1    GDAI01002115    JAI15488.1    GFDF01004263    JAV09821.1    AXCN02001962    APCN01001656    AXCM01000377    JRES01000753    KNC28740.1    KQ414670    KOC64379.1    AAAB01008980    EAA13899.3    KZ288266    PBC30117.1    KA648484    AFP63113.1    KQ434912    KZC11399.1    GDHF01012086    JAI40228.1    CH477825    EAT35876.1    JXUM01048464    KQ561563    KXJ78163.1    KQ435760    KOX75636.1    NEVH01026085    PNF14998.1    GAKP01005185    JAC53767.1    GBXI01003889    JAD10403.1    GEZM01068147    GEZM01068146    JAV67145.1    GANO01001125    JAB58746.1    GBHO01009152    GBHO01009147    GBRD01007137    GDHC01017857    GDHC01003619    JAG34452.1    JAG34457.1    JAG58684.1    JAQ00772.1    JAQ15010.1    ATLV01016136    KE525057    KFB41000.1    GFDL01010392    JAV24653.1    GFDL01010446    JAV24599.1    UFQS01003316    UFQT01003316    SSX15487.1    SSX34853.1    CH954179    EDV55226.1    CM000158    EDW91480.1    CVRI01000038    CRK93990.1    GGFJ01008265    MBW57406.1    ADMH02002089    ETN59388.1    KQ978406    KYM94139.1    GGFK01012374    MBW45695.1    CM000362    EDX07828.1    CM002911    KMY95135.1    AE013599    AHN56412.1    AY118488    CH902619    EDV36881.1    DS231821    EDS44982.1    KK107105    QOIP01000011    EZA59542.1    RLU16621.1    CH480816    EDW48618.1    LBMM01002883    KMQ94246.1    ADTU01018761    GL887908    EGI69501.1    KQ971348    EFA05544.1    CH940648    EDW60333.1    CH963850    EDW74809.1    OUUW01000001    SPP75467.1    CP012524    ALC42726.1    DS235366    EEB15327.1    GL436457    EFN71964.1    CH916375    EDV98249.1    NNAY01004159    OXU18271.1    CH933808    EDW09558.1    GL446310    EFN88049.1    CM000071    EAL26000.1    CH479278    EDW40105.1    ABLF02028058    GL762137    EFZ21976.1    KQ983082    KYQ47722.1    LJIG01002934    KRT84006.1    KQ981693    KYN37688.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    + More
UP000015103    UP000075886    UP000075881    UP000075840    UP000075883    UP000037069    UP000053825    UP000075903    UP000075882    UP000007062    UP000075885    UP000075902    UP000075920    UP000076407    UP000242457    UP000005203    UP000076408    UP000075884    UP000076502    UP000008820    UP000095300    UP000095301    UP000069940    UP000249989    UP000053105    UP000235965    UP000075880    UP000030765    UP000008711    UP000091820    UP000078200    UP000092445    UP000002282    UP000183832    UP000000673    UP000069272    UP000078542    UP000000304    UP000000803    UP000007801    UP000002320    UP000053097    UP000279307    UP000192221    UP000001292    UP000036403    UP000005205    UP000007755    UP000007266    UP000008792    UP000007798    UP000268350    UP000092553    UP000009046    UP000000311    UP000001070    UP000192223    UP000215335    UP000002358    UP000009192    UP000008237    UP000001819    UP000008744    UP000007819    UP000092443    UP000075809    UP000078541   

PRIDE

H9JRL2    Q7JW12   

Pfam

PF00085   Thioredoxin        + More
PF07776   zf-AD
PF00366   Ribosomal_S17
PF16205   Ribosomal_S17_N

Interpro

IPR013766   Thioredoxin_domain        + More
IPR036249   Thioredoxin-like_sf       
IPR037463   TMX2_thioredoxin_dom       
IPR012934   Znf_AD       
IPR000266   Ribosomal_S17/S11       
IPR032440   Ribosomal_S11_N       
IPR012340   NA-bd_OB-fold       

SUPFAM

SSF52833   SSF52833        + More
SSF50249   SSF50249       

CDD

cd02962  TMX2

ProteinModelPortal

H9JRL2   A0A2A4K9T8   A0A2H1WVZ9   A0A3S2NQR2   A0A2W1B949   A0A0N0PED9   + More
S4P8Z7   A0A212EJW1   A0A0N1IDZ6   A0A1B6MRG7   A0A1B6HNH3   A0A1B6HKI3   A0A1B6GWN6   A0A224XWZ0   A0A1B6DJK8   A0A023F9X3   A0A1L8DTN1   R4FNU6   A0A0K8TMV0   A0A1L8DTS1   A0A182QB11   A0A182KE95   A0A182HR86   A0A182LZZ8   A0A0L0C906   A0A0L7R0K1   A0A182UY66   A0A182KZ52   Q7Q132   A0A182PW38   A0A182TIS5   A0A1Y9IVU9   A0A182X2E7   A0A2A3EEG0   A0A087ZY71   T1PIK4   A0A182Y695   A0A182NP18   A0A154PHS9   A0A0K8VN13   Q16NF4   A0A1I8PPB3   A0A1I8MH82   A0A182G8V1   A0A0M9A3E0   A0A2J7PFA3   A0A034WHH4   A0A0A1XIQ7   A0A1Y1L586   A0A182J410   U5EX52   A0A0A9YN20   A0A084VSQ6   A0A1Q3FAY1   A0A1Q3FAQ1   A0A336N1M8   B3NJN0   A0A1A9WKV2   A0A1A9UPZ2   A0A1A9ZDF0   B4PB67   A0A1J1I508   A0A2M4BWF8   W5J7M2   A0A182F550   A0A151I7G4   A0A2M4AY70   B4QE41   A0A0J9U6A6   A0A0B4LFY2   Q7JW12   B3MHA4   B0W1B2   A0A026WU36   A0A1W4V4M5   B4HPI0   A0A0J7KVB7   A0A158NKA9   F4W8L0   D2A3P9   B4LQ10   B4MRS0   A0A3B0J2N5   A0A0M4EGM3   E0VPM1   E2A3S2   B4JWB1   A0A1W4XCE7   A0A232EIY7   K7J6P4   B4KT38   E2B8C9   Q28YG5   B4HC56   J9JM83   A0A1A9XFQ5   E9IBV0   A0A151WIP9   A0A0T6B9L1   A0A195FB94  

PDB

2DJ0     E-value=6.87142e-25,     Score=279

KEGG

101747114    no KO assigned | (RefSeq) thioredoxin-related transmembrane protein 2 homolog

GO

GO:0016021   GO:0005623   GO:0045454   GO:0008270   GO:0005634   GO:0005840   GO:0003735   GO:0006412   GO:0006662   GO:0015035   GO:0006457   GO:0051082   GO:0003676   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR10744  

Subcellular location

Membrane  

Length:

205

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

40.7813

Exp number, first 60 AAs:

33.95987

Total prob of N-in:

0.88881

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  205

 

 

Pi

22.780451

Theta

22.753915

Tajima's D

-0.456318

CLR

1.566051

CSRT

0.258937053147343

Interpretation

Uncertain