Gene

KWMTBOMO14881

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106709759_[Papilio_machaon]

Location

Bomo_Chr24(-):16971434-16972860      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.286

CDS

ATGAACAAAACACAATTAGATAATTATATAAATGAATTTATAAAAAGTATTAACAACACATGTCAAAAGACCGTACCGCGGTCTTCTGGTCGGCCATCGAAACCACACTGGTGGACTGATGAGTTGGAAATTTTGAAAAAGAAGGTCATACAGAATCATCACATATTATCGAAAGCGGCACGTCGCGGAAATCCTATAGAAGAGCTTATAAAAGAAAAATTAGAAATAAAAGAACATTATGTTAAAGCAATACAAGAAGCTTCAACAAAGAGCTTTAAAGAATTCTGCAATATGCAAGAGAAAGAGAATGTTTGGTCGGTCACGAATCGTATTATACGAACGAAACCAGTTGCGCAGCCTCCTTCTACACTCAAAAAATCGAATGGTGAGTACACGCGTGATGTGGATGAAGCAGCGCAATACTTTGTAAATGGACTTTTCCCCACTGACACAGAGGACAATGAAATTCAACGAAGTATACGCGCTAGAATGTACTTGCCCCCGAATACGCAAAATGAACCACTTTTCAACACAACAGAGATTATTGAAACTCTTAAAACTTTCAATTCAAAGAAAGCGCCAGGATATGACGGCCTCACAGCGGACATATGTCTGGTTGCTACCGAATCATATCCAGAAATAGTAACAAATATCTTAAATCAGGCACTTATTCTTGAATATTTCCCAAAACCTTGGAAAAGGGCAATAGCCAAAATCATTCCCAAACCAGGAAAAGAAACTTATGATACTTTAACATCTTTCCGACCGATCGGTCTGATACCAGTTTTCGGCAAGCTTTACGAAAAACTGTTGATAAATAGATTAAACCATCACATGTATACTAACCAGATTGATAACGAAAAACAGTACGGTTTTAAGCTTCAGAAATCGACAGTTATGGCTGTAAATAAAGCCATCAAGATTGTAAGAGAGGCCAAGGATGCTGGACAACAAGTGGCAATAGTGTCACTCGACATAAGAGGCGCATTCGACAATGCTTGGTGGCCATCAATATTTTGTCAGTTGAAACGAATCAAATGTCCCAGAAATATATATGGTATTCTCCTAAGTTACACAGAAGAGCGCGAAGTAGTGGTCAGCTCATAA

Protein

MNKTQLDNYINEFIKSINNTCQKTVPRSSGRPSKPHWWTDELEILKKKVIQNHHILSKAARRGNPIEELIKEKLEIKEHYVKAIQEASTKSFKEFCNMQEKENVWSVTNRIIRTKPVAQPPSTLKKSNGEYTRDVDEAAQYFVNGLFPTDTEDNEIQRSIRARMYLPPNTQNEPLFNTTEIIETLKTFNSKKAPGYDGLTADICLVATESYPEIVTNILNQALILEYFPKPWKRAIAKIIPKPGKETYDTLTSFRPIGLIPVFGKLYEKLLINRLNHHMYTNQIDNEKQYGFKLQKSTVMAVNKAIKIVREAKDAGQQVAIVSLDIRGAFDNAWWPSIFCQLKRIKCPRNIYGILLSYTEEREVVVSS

Uniprot

Q9BLI1   Q9BLH8   Q9BLI0   Q9BLI2   Q9BLI3   A0A194QZG8   + More
Q93139   Q9BLH9   A0A069DVK3   Q9BLI5   A0A224X5M4   Q9BLI4   A0A0K1IK29   A0A023EX80   A0A087TAD8   A0A1W7R9Y4   A0A131XWC0   A0A0J7KTH2   A0A023F069   A0A0K1IK14   A0A1B6D5E4   A0A2P8Z4I4   A0A1B6DRM7   A0A1B6E1N0   A0A087TJZ1   A0A2R7X4D5   A0A087TI44   J9M8T8   A0A087UHT1   A0A2R7WIQ8   K7JMI9   J9L0V3   X1XHQ0   A0A224X6T4   A0A2S2PRL8   A0A2M4CL98   R4FPB9   J9MA03   J9KNN8   L7MBK1   A0A023F700   A0A2M4CS98   A0A1L8DIZ6   K7IN67   A0A2M4BBV9   A0A2R7VTT1   A0A2M4BC01   A0A1Y1LKN6   A0A2M4CKQ7   A0A2M4BDI3   A0A224X653   A0A2M4BC28   X1WNG1   J9LVU7   A0A023EYP7   A0A2M4BCE1   A0A2A4IUM2   A0A2M4AHG6   A0A2M4AGH2   A0A224XK92   A0A224X724   A0A2S2N6Q7   A0A0J7KIV1   A0A2R7WVP1   J9LES5   A0A2M4ADW9   A0A1B6MTW0   A0A147BK23   K7JAI1   A0A2H8TIE5   A0A069DX78   A0A224XHW8   J9LA43   J9KIA2   A0A142LX26   A0A224X6U5   A0A023F6S4   A0A2J7QB68   J9LMF6   J9KNS1   J9M0H4   A0A2S2NHF8   A0A139W9J0   A0A1B6C2V8   A0A2S2NGH7   A0A2J7PVE7   J9JWJ3   A0A2J7R8R8  

Pubmed

11319268    26354079    7623845    15247245    26334808    25474469    + More
29403074    20075255    25576852    28004739    29652888    25527032    18362917    19820115   

EMBL

AB046672    BAB21515.1    AB046675    BAB21518.1    AB046673    BAB21516.1    + More
AB046671    BAB21514.1    AB046670    BAB21513.1    KQ461108    KPJ08991.1    D38414    BAA07467.1    AB046674    BAB21517.1    GBGD01000761    JAC88128.1    AB046668    BAB21511.1    GFTR01008639    JAW07787.1    AB046669    BAB21512.1    KP771711    AKU04648.1    GBBI01004920    JAC13792.1    KK114278    KFM62077.1    GFAH01000444    JAV47945.1    GEFM01005915    JAP69881.1    LBMM01003366    KMQ93606.1    GBBI01003810    JAC14902.1    KP771712    AKU04650.1    GEDC01016405    JAS20893.1    PYGN01000200    PSN51387.1    GEDC01008950    JAS28348.1    GEDC01005462    JAS31836.1    KK115566    KFM65430.1    KK856990    PTY26659.1    KK115320    KFM64783.1    ABLF02007471    ABLF02007472    KK119855    KFM76920.1    KK854888    PTY19513.1    AAZX01008070    ABLF02012458    ABLF02012459    ABLF02010931    GFTR01008261    JAW08165.1    GGMR01019493    MBY32112.1    GGFL01001916    MBW66094.1    GAHY01000238    JAA77272.1    ABLF02006737    ABLF02023257    GACK01003634    JAA61400.1    GBBI01001699    JAC17013.1    GGFL01004044    MBW68222.1    GFDF01007661    JAV06423.1    GGFJ01001369    MBW50510.1    KK854049    PTY10271.1    GGFJ01001370    MBW50511.1    GEZM01053022    JAV74219.1    GGFL01001583    MBW65761.1    GGFJ01001727    MBW50868.1    GFTR01008469    JAW07957.1    GGFJ01001439    MBW50580.1    ABLF02019087    ABLF02019088    ABLF02026448    ABLF02049713    ABLF02034925    GBBI01004973    JAC13739.1    GGFJ01001541    MBW50682.1    NWSH01007753    PCG62823.1    GGFK01006866    MBW40187.1    GGFK01006563    MBW39884.1    GFTR01007997    JAW08429.1    GFTR01008169    JAW08257.1    GGMR01000226    MBY12845.1    LBMM01006940    KMQ90177.1    KK855707    PTY23617.1    ABLF02008889    ABLF02041820    GGFK01005660    MBW38981.1    GEBQ01000617    JAT39360.1    GEGO01004274    JAR91130.1    AAZX01006426    GFXV01002090    MBW13895.1    GBGD01000389    JAC88500.1    GFTR01008254    JAW08172.1    ABLF02018098    ABLF02027073    KU543673    AMS38352.1    GFTR01008251    JAW08175.1    GBBI01001646    JAC17066.1    NEVH01016302    PNF25823.1    ABLF02016436    ABLF02018808    ABLF02034460    GGMR01004001    MBY16620.1    KQ972226    KYB24577.1    GEDC01029594    JAS07704.1    GGMR01003651    MBY16270.1    NEVH01020963    PNF20308.1    ABLF02013358    ABLF02013361    ABLF02054869    NEVH01006721    PNF37225.1   

Proteomes

UP000053240    UP000054359    UP000036403    UP000245037    UP000007819    UP000002358    + More
UP000218220    UP000235965    UP000007266   

PRIDE

Q9BLI2    Q9BLI3    Q93139    Q9BLI5    Q9BLI4   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF00075   RNase_H
PF00004   AAA
PF17862   AAA_lid_3
PF16725   Nucleolin_bd
PF07530   PRE_C2HC
PF00098   zf-CCHC

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR003959   ATPase_AAA_core       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR031996   NVL2_nucleolin-bd       
IPR041569   AAA_lid_3       
IPR003593   AAA+_ATPase       
IPR038100   NLV2_N_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR006579   Pre_C2HC_dom       

SUPFAM

SSF56219   SSF56219        + More
SSF53098   SSF53098       
SSF52540   SSF52540       
SSF57756   SSF57756       

Gene 3D

3.60.10.10     3.30.420.10     1.10.10.2010    

ProteinModelPortal

Q9BLI1   Q9BLH8   Q9BLI0   Q9BLI2   Q9BLI3   A0A194QZG8   + More
Q93139   Q9BLH9   A0A069DVK3   Q9BLI5   A0A224X5M4   Q9BLI4   A0A0K1IK29   A0A023EX80   A0A087TAD8   A0A1W7R9Y4   A0A131XWC0   A0A0J7KTH2   A0A023F069   A0A0K1IK14   A0A1B6D5E4   A0A2P8Z4I4   A0A1B6DRM7   A0A1B6E1N0   A0A087TJZ1   A0A2R7X4D5   A0A087TI44   J9M8T8   A0A087UHT1   A0A2R7WIQ8   K7JMI9   J9L0V3   X1XHQ0   A0A224X6T4   A0A2S2PRL8   A0A2M4CL98   R4FPB9   J9MA03   J9KNN8   L7MBK1   A0A023F700   A0A2M4CS98   A0A1L8DIZ6   K7IN67   A0A2M4BBV9   A0A2R7VTT1   A0A2M4BC01   A0A1Y1LKN6   A0A2M4CKQ7   A0A2M4BDI3   A0A224X653   A0A2M4BC28   X1WNG1   J9LVU7   A0A023EYP7   A0A2M4BCE1   A0A2A4IUM2   A0A2M4AHG6   A0A2M4AGH2   A0A224XK92   A0A224X724   A0A2S2N6Q7   A0A0J7KIV1   A0A2R7WVP1   J9LES5   A0A2M4ADW9   A0A1B6MTW0   A0A147BK23   K7JAI1   A0A2H8TIE5   A0A069DX78   A0A224XHW8   J9LA43   J9KIA2   A0A142LX26   A0A224X6U5   A0A023F6S4   A0A2J7QB68   J9LMF6   J9KNS1   J9M0H4   A0A2S2NHF8   A0A139W9J0   A0A1B6C2V8   A0A2S2NGH7   A0A2J7PVE7   J9JWJ3   A0A2J7R8R8  

KEGG

101742058    no KO assigned | (RefSeq) uncharacterized LOC101742058

GO

GO:0016021   GO:0004523   GO:0003676   GO:0003964   GO:0005524   GO:0008270  

Length:

368

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00555

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03897

outside

1  -  368

 

 

Pi

243.531476

Theta

153.247531

Tajima's D

1.996132

CLR

13.974343

CSRT

0.880905954702265

Interpretation

Uncertain